RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
CNKSR1-202ENST00000374253 FMN2Q9NZ56 1722 aa20.15■□□□□ 0.82
CNKSR1-202ENST00000374253 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
CNKSR1-202ENST00000374253 MFAP1P55081 439 aaKnown RBP20.14■□□□□ 0.81
CNKSR1-202ENST00000374253 NUCB1Q02818 461 aa20.14■□□□□ 0.81
CNKSR1-202ENST00000374253 API5Q9BZZ5 524 aaKnown RBP20.14■□□□□ 0.81
CNKSR1-202ENST00000374253 IGSF1Q8N6C5 1336 aa20.14■□□□□ 0.81
CNKSR1-202ENST00000374253 CRB1P82279 1406 aa20.13■□□□□ 0.81
CNKSR1-202ENST00000374253 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
CNKSR1-202ENST00000374253 CHD1LQ86WJ1 897 aa20.13■□□□□ 0.81
CNKSR1-202ENST00000374253 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
CNKSR1-202ENST00000374253 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
CNKSR1-202ENST00000374253 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
CNKSR1-202ENST00000374253 PSME1Q06323 249 aa20.11■□□□□ 0.81
CNKSR1-202ENST00000374253 G2E3Q7L622 706 aa20.1■□□□□ 0.81
CNKSR1-202ENST00000374253 KDRP35968 1356 aa20.1■□□□□ 0.81
CNKSR1-202ENST00000374253 LMOD2Q6P5Q4 547 aa20.1■□□□□ 0.81
CNKSR1-202ENST00000374253 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
CNKSR1-202ENST00000374253 ORAI2Q96SN7 254 aa20.09■□□□□ 0.81
CNKSR1-202ENST00000374253 F6X3S4 739 aa20.09■□□□□ 0.81
CNKSR1-202ENST00000374253 GAS2L2Q8NHY3 880 aa20.08■□□□□ 0.81
CNKSR1-202ENST00000374253 SLC4A10Q6U841 1118 aa20.08■□□□□ 0.8
CNKSR1-202ENST00000374253 MARF1Q9Y4F3 1742 aaKnown RBP20.08■□□□□ 0.8
CNKSR1-202ENST00000374253 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
CNKSR1-202ENST00000374253 APBB1O00213 710 aa20.07■□□□□ 0.8
CNKSR1-202ENST00000374253 SLKQ9H2G2 1235 aaPredicted RBP20.07■□□□□ 0.8
CNKSR1-202ENST00000374253 RGS12O14924 1447 aa20.06■□□□□ 0.8
CNKSR1-202ENST00000374253 MSH6P52701 1360 aa20.06■□□□□ 0.8
CNKSR1-202ENST00000374253 NFKBIBQ15653 356 aa20.06■□□□□ 0.8
CNKSR1-202ENST00000374253 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
CNKSR1-202ENST00000374253 KIAA0232Q92628 1395 aa20.05■□□□□ 0.8
CNKSR1-202ENST00000374253 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
CNKSR1-202ENST00000374253 MEIS3Q99687 375 aa20.05■□□□□ 0.8
CNKSR1-202ENST00000374253 CHMP4BQ9H444 224 aaKnown RBP20.05■□□□□ 0.8
CNKSR1-202ENST00000374253 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
CNKSR1-202ENST00000374253 INTS3Q68E01 1043 aaKnown RBP20.04■□□□□ 0.8
CNKSR1-202ENST00000374253 GCC1Q96CN9 775 aa20.04■□□□□ 0.8
CNKSR1-202ENST00000374253 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
CNKSR1-202ENST00000374253 C22orf23Q9BZE7 217 aa20.04■□□□□ 0.8
CNKSR1-202ENST00000374253 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
CNKSR1-202ENST00000374253 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
CNKSR1-202ENST00000374253 NWD1Q149M9 1564 aa20.02■□□□□ 0.8
CNKSR1-202ENST00000374253 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.79
CNKSR1-202ENST00000374253 C16orf71Q8IYS4 520 aaPredicted RBP20.01■□□□□ 0.79
CNKSR1-202ENST00000374253 NPHP4O75161 1426 aaPredicted RBP20.01■□□□□ 0.79
CNKSR1-202ENST00000374253 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
CNKSR1-202ENST00000374253 BECN1Q14457 450 aa20.01■□□□□ 0.79
CNKSR1-202ENST00000374253 TBC1D2Q9BYX2 928 aa20.01■□□□□ 0.79
CNKSR1-202ENST00000374253 FRAT2O75474 233 aaPredicted RBP20■□□□□ 0.79
CNKSR1-202ENST00000374253 SMARCA5O60264 1052 aaPredicted RBP19.99■□□□□ 0.79
CNKSR1-202ENST00000374253 IP6K1Q92551 441 aa19.99■□□□□ 0.79
CNKSR1-202ENST00000374253 PTPRCP08575 1304 aa19.99■□□□□ 0.79
CNKSR1-202ENST00000374253 LTN1O94822 1766 aa19.99■□□□□ 0.79
CNKSR1-202ENST00000374253 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
CNKSR1-202ENST00000374253 ADAMTSL3P82987 1691 aa19.99■□□□□ 0.79
CNKSR1-202ENST00000374253 CEP85Q6P2H3 762 aa19.98■□□□□ 0.79
CNKSR1-202ENST00000374253 OTUD7AQ8TE49 926 aaPredicted RBP19.98■□□□□ 0.79
CNKSR1-202ENST00000374253 ZNF142P52746 1687 aaPredicted RBP19.98■□□□□ 0.79
CNKSR1-202ENST00000374253 PROSER2Q86WR7 435 aaPredicted RBP19.98■□□□□ 0.79
CNKSR1-202ENST00000374253 STK31Q9BXU1 1019 aa19.98■□□□□ 0.79
CNKSR1-202ENST00000374253 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
CNKSR1-202ENST00000374253 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
CNKSR1-202ENST00000374253 ATP10DQ9P241 1426 aa19.97■□□□□ 0.79
CNKSR1-202ENST00000374253 FKBP5Q13451 457 aaPredicted RBP19.97■□□□□ 0.79
CNKSR1-202ENST00000374253 ANKRD44Q8N8A2 993 aa19.97■□□□□ 0.79
CNKSR1-202ENST00000374253 BMP2KLQ5H9B9 411 aa19.96■□□□□ 0.79
CNKSR1-202ENST00000374253 DCTPP1Q9H773 170 aa19.96■□□□□ 0.79
CNKSR1-202ENST00000374253 DDX17Q92841 729 aaKnown RBP19.96■□□□□ 0.79
CNKSR1-202ENST00000374253 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
CNKSR1-202ENST00000374253 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
CNKSR1-202ENST00000374253 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
CNKSR1-202ENST00000374253 GCP02774 474 aa19.95■□□□□ 0.78
CNKSR1-202ENST00000374253 FLIIQ13045 1269 aa19.95■□□□□ 0.78
CNKSR1-202ENST00000374253 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
CNKSR1-202ENST00000374253 EIF2S2P20042 333 aaKnown RBP19.94■□□□□ 0.78
CNKSR1-202ENST00000374253 NFAT5O94916 1531 aa19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 GSPT1P15170 499 aaKnown RBP19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 TBC1D9Q6ZT07 1266 aa19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 PLEKHM2Q8IWE5 1019 aa19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 KCNQ3O43525 872 aa19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 MPRIPQ6WCQ1 1025 aa19.93■□□□□ 0.78
CNKSR1-202ENST00000374253 CCDC30Q5VVM6 783 aa19.92■□□□□ 0.78
CNKSR1-202ENST00000374253 KCNH5Q8NCM2 988 aa19.92■□□□□ 0.78
CNKSR1-202ENST00000374253 PHAXQ9H814 394 aaKnown RBP19.92■□□□□ 0.78
CNKSR1-202ENST00000374253 RPAP2Q8IXW5 612 aaPredicted RBP19.91■□□□□ 0.78
CNKSR1-202ENST00000374253 AXIN2Q9Y2T1 843 aa19.91■□□□□ 0.78
CNKSR1-202ENST00000374253 KRT28Q7Z3Y7 464 aa19.91■□□□□ 0.78
CNKSR1-202ENST00000374253 ZC3H6P61129 1189 aaKnown RBP19.9■□□□□ 0.78
CNKSR1-202ENST00000374253 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
CNKSR1-202ENST00000374253 ZNF530Q6P9A1 599 aaPredicted RBP19.9■□□□□ 0.78
CNKSR1-202ENST00000374253 ANXA1P04083 346 aa19.9■□□□□ 0.78
CNKSR1-202ENST00000374253 USP54Q70EL1 1684 aa19.89■□□□□ 0.77
CNKSR1-202ENST00000374253 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.77
CNKSR1-202ENST00000374253 ARHGEF25Q86VW2 580 aa19.89■□□□□ 0.77
CNKSR1-202ENST00000374253 ANKRD24Q8TF21 1146 aa19.89■□□□□ 0.77
CNKSR1-202ENST00000374253 EXOC6BQ9Y2D4 811 aa19.89■□□□□ 0.77
CNKSR1-202ENST00000374253 LRRC37A3O60309 1634 aa19.88■□□□□ 0.77
CNKSR1-202ENST00000374253 ANTXR1Q9H6X2 564 aa19.87■□□□□ 0.77
CNKSR1-202ENST00000374253 TSHZ3Q63HK5 1081 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms