RNA–Protein interactions for RNA: ENST00000373895.7

TFAM-201, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2 BASIC

Gene TFAM, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-201ENST00000373895 MAP3K19Q56UN5 1328 aa17.2■□□□□ 0.34
TFAM-201ENST00000373895 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
TFAM-201ENST00000373895 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
TFAM-201ENST00000373895 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
TFAM-201ENST00000373895 HOXC9P31274 260 aa17.18■□□□□ 0.34
TFAM-201ENST00000373895 AMPHP49418 695 aa17.18■□□□□ 0.34
TFAM-201ENST00000373895 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
TFAM-201ENST00000373895 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
TFAM-201ENST00000373895 FAM208AQ9UK61 1670 aaKnown RBP17.17■□□□□ 0.34
TFAM-201ENST00000373895 FYB1O15117 783 aa17.17■□□□□ 0.34
TFAM-201ENST00000373895 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
TFAM-201ENST00000373895 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
TFAM-201ENST00000373895 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
TFAM-201ENST00000373895 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
TFAM-201ENST00000373895 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
TFAM-201ENST00000373895 BTAF1O14981 1849 aa17.16■□□□□ 0.34
TFAM-201ENST00000373895 STK32BQ9NY57 414 aa17.15■□□□□ 0.34
TFAM-201ENST00000373895 KIF20BQ96Q89 1820 aa17.13■□□□□ 0.33
TFAM-201ENST00000373895 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
TFAM-201ENST00000373895 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
TFAM-201ENST00000373895 CDCA8Q53HL2 280 aa17.13■□□□□ 0.33
TFAM-201ENST00000373895 MYOM1P52179 1685 aa17.11■□□□□ 0.33
TFAM-201ENST00000373895 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
TFAM-201ENST00000373895 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
TFAM-201ENST00000373895 NBPF6Q5VWK0 638 aa17.1■□□□□ 0.33
TFAM-201ENST00000373895 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
TFAM-201ENST00000373895 NBPF4Q96M43 638 aa17.1■□□□□ 0.33
TFAM-201ENST00000373895 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
TFAM-201ENST00000373895 SHANK3Q9BYB0 1731 aa17.1■□□□□ 0.33
TFAM-201ENST00000373895 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
TFAM-201ENST00000373895 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
TFAM-201ENST00000373895 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
TFAM-201ENST00000373895 ZCRB1Q8TBF4 217 aaKnown RBP17.09■□□□□ 0.33
TFAM-201ENST00000373895 MEGF6O75095 1541 aa17.09■□□□□ 0.33
TFAM-201ENST00000373895 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
TFAM-201ENST00000373895 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
TFAM-201ENST00000373895 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
TFAM-201ENST00000373895 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
TFAM-201ENST00000373895 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
TFAM-201ENST00000373895 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
TFAM-201ENST00000373895 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
TFAM-201ENST00000373895 PTGER2P43116 358 aa17.07■□□□□ 0.32
TFAM-201ENST00000373895 PRIM1P49642 420 aaKnown RBP17.07■□□□□ 0.32
TFAM-201ENST00000373895 PITPNM1O00562 1244 aa17.06■□□□□ 0.32
TFAM-201ENST00000373895 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
TFAM-201ENST00000373895 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
TFAM-201ENST00000373895 INSRP06213 1382 aa17.05■□□□□ 0.32
TFAM-201ENST00000373895 KCNQ4P56696 695 aa17.05■□□□□ 0.32
TFAM-201ENST00000373895 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
TFAM-201ENST00000373895 FLT4P35916 1363 aa17.04■□□□□ 0.32
TFAM-201ENST00000373895 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
TFAM-201ENST00000373895 EMILIN1Q9Y6C2 1016 aa17.04■□□□□ 0.32
TFAM-201ENST00000373895 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
TFAM-201ENST00000373895 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
TFAM-201ENST00000373895 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
TFAM-201ENST00000373895 NSD2O96028 1365 aa17.02■□□□□ 0.32
TFAM-201ENST00000373895 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.32
TFAM-201ENST00000373895 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
TFAM-201ENST00000373895 MAP2P11137 1827 aaKnown RBP17.01■□□□□ 0.31
TFAM-201ENST00000373895 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
TFAM-201ENST00000373895 LY75O60449 1722 aa17.01■□□□□ 0.31
TFAM-201ENST00000373895 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
TFAM-201ENST00000373895 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
TFAM-201ENST00000373895 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
TFAM-201ENST00000373895 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
TFAM-201ENST00000373895 YY1P25490 414 aa16.99■□□□□ 0.31
TFAM-201ENST00000373895 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
TFAM-201ENST00000373895 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
TFAM-201ENST00000373895 SYT17Q9BSW7 474 aa16.98■□□□□ 0.31
TFAM-201ENST00000373895 QSER1Q2KHR3 1735 aa16.98■□□□□ 0.31
TFAM-201ENST00000373895 PCDH11XQ9BZA7 1347 aa16.97■□□□□ 0.31
TFAM-201ENST00000373895 PCDH11YQ9BZA8 1340 aa16.97■□□□□ 0.31
TFAM-201ENST00000373895 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
TFAM-201ENST00000373895 TFCP2L1Q9NZI6 479 aa16.97■□□□□ 0.31
TFAM-201ENST00000373895 CCNL1Q9UK58 526 aaPredicted RBP16.97■□□□□ 0.31
TFAM-201ENST00000373895 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
TFAM-201ENST00000373895 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.31
TFAM-201ENST00000373895 CYP27B1O15528 508 aa16.96■□□□□ 0.31
TFAM-201ENST00000373895 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
TFAM-201ENST00000373895 ARXQ96QS3 562 aa16.96■□□□□ 0.31
TFAM-201ENST00000373895 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
TFAM-201ENST00000373895 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
TFAM-201ENST00000373895 ITGB4P16144 1822 aa16.94■□□□□ 0.3
TFAM-201ENST00000373895 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
TFAM-201ENST00000373895 EYA1Q99502 592 aa16.94■□□□□ 0.3
TFAM-201ENST00000373895 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
TFAM-201ENST00000373895 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
TFAM-201ENST00000373895 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
TFAM-201ENST00000373895 PANK3Q9H999 370 aa16.93■□□□□ 0.3
TFAM-201ENST00000373895 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
TFAM-201ENST00000373895 KLHL34Q8N239 644 aa16.91■□□□□ 0.3
TFAM-201ENST00000373895 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
TFAM-201ENST00000373895 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
TFAM-201ENST00000373895 C5P01031 1676 aa16.9■□□□□ 0.3
TFAM-201ENST00000373895 PALLDQ8WX93 1383 aa16.89■□□□□ 0.3
TFAM-201ENST00000373895 TAF1LQ8IZX4 1826 aa16.89■□□□□ 0.29
TFAM-201ENST00000373895 POLD1P28340 1107 aa16.89■□□□□ 0.29
TFAM-201ENST00000373895 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
TFAM-201ENST00000373895 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
TFAM-201ENST00000373895 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms