RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 MEGF6O75095 1541 aa28.49■■■□□ 2.15
CHPF-202ENST00000373891 PNPLA7Q6ZV29 1317 aa28.48■■■□□ 2.15
CHPF-202ENST00000373891 SLC27A3Q5K4L6 730 aa28.48■■■□□ 2.15
CHPF-202ENST00000373891 TFCP2L1Q9NZI6 479 aa28.47■■■□□ 2.15
CHPF-202ENST00000373891 ANKRD36BQ8N2N9 1353 aa28.47■■■□□ 2.15
CHPF-202ENST00000373891 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
CHPF-202ENST00000373891 RRS1Q15050 365 aaKnown RBP28.46■■■□□ 2.15
CHPF-202ENST00000373891 USHBP1Q8N6Y0 703 aa28.46■■■□□ 2.15
CHPF-202ENST00000373891 ZCRB1Q8TBF4 217 aaKnown RBP28.46■■■□□ 2.15
CHPF-202ENST00000373891 NSD2O96028 1365 aa28.46■■■□□ 2.15
CHPF-202ENST00000373891 GPR162Q16538 588 aa28.45■■■□□ 2.14
CHPF-202ENST00000373891 MAP3K5Q99683 1374 aa28.45■■■□□ 2.14
CHPF-202ENST00000373891 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
CHPF-202ENST00000373891 POLD1P28340 1107 aa28.43■■■□□ 2.14
CHPF-202ENST00000373891 GGNBP2Q9H3C7 697 aa28.43■■■□□ 2.14
CHPF-202ENST00000373891 KIF20BQ96Q89 1820 aa28.42■■■□□ 2.14
CHPF-202ENST00000373891 SLC16A10Q8TF71 515 aa28.42■■■□□ 2.14
CHPF-202ENST00000373891 NBPF6Q5VWK0 638 aa28.41■■■□□ 2.14
CHPF-202ENST00000373891 NBPF4Q96M43 638 aa28.41■■■□□ 2.14
CHPF-202ENST00000373891 CCNL1Q9UK58 526 aaPredicted RBP28.4■■■□□ 2.14
CHPF-202ENST00000373891 RTL1A6NKG5 1358 aa28.38■■■□□ 2.13
CHPF-202ENST00000373891 MSH5O43196 834 aa28.38■■■□□ 2.13
CHPF-202ENST00000373891 FYB1O15117 783 aa28.37■■■□□ 2.13
CHPF-202ENST00000373891 NLGN2Q8NFZ4 835 aa28.37■■■□□ 2.13
CHPF-202ENST00000373891 USP47Q96K76 1375 aa28.36■■■□□ 2.13
CHPF-202ENST00000373891 C5P01031 1676 aa28.35■■■□□ 2.13
CHPF-202ENST00000373891 RAPGEF4Q8WZA2 1011 aa28.35■■■□□ 2.13
CHPF-202ENST00000373891 SMG6Q86US8 1419 aaKnown RBP28.35■■■□□ 2.13
CHPF-202ENST00000373891 GOLGB1Q14789 3259 aaKnown RBP28.34■■■□□ 2.13
CHPF-202ENST00000373891 TAF1LQ8IZX4 1826 aa28.33■■■□□ 2.13
CHPF-202ENST00000373891 TMF1P82094 1093 aa28.32■■■□□ 2.12
CHPF-202ENST00000373891 HSP90AB2PQ58FF8 381 aa28.32■■■□□ 2.12
CHPF-202ENST00000373891 MSL1Q68DK7 614 aa28.32■■■□□ 2.12
CHPF-202ENST00000373891 COL23A1Q86Y22 540 aaPredicted RBP28.32■■■□□ 2.12
CHPF-202ENST00000373891 ITGB4P16144 1822 aa28.32■■■□□ 2.12
CHPF-202ENST00000373891 TATP17735 454 aaPredicted RBP28.31■■■□□ 2.12
CHPF-202ENST00000373891 SENP3-EIF4A1A0A087X0R7 540 aa28.3■■■□□ 2.12
CHPF-202ENST00000373891 SLC24A1O60721 1099 aa28.3■■■□□ 2.12
CHPF-202ENST00000373891 TOGARAM1Q9Y4F4 1720 aa28.29■■■□□ 2.12
CHPF-202ENST00000373891 CGNL1Q0VF96 1302 aa28.27■■■□□ 2.12
CHPF-202ENST00000373891 C1QTNF8P60827 252 aa28.27■■■□□ 2.12
CHPF-202ENST00000373891 INSRP06213 1382 aa28.26■■■□□ 2.12
CHPF-202ENST00000373891 PCDH11XQ9BZA7 1347 aa28.26■■■□□ 2.11
CHPF-202ENST00000373891 PCDH11YQ9BZA8 1340 aa28.26■■■□□ 2.11
CHPF-202ENST00000373891 FLT4P35916 1363 aa28.25■■■□□ 2.11
CHPF-202ENST00000373891 MPRIPQ6WCQ1 1025 aa28.25■■■□□ 2.11
CHPF-202ENST00000373891 YBX3P16989 372 aaKnown RBP eCLIP28.24■■■□□ 2.11
CHPF-202ENST00000373891 PALLDQ8WX93 1383 aa28.24■■■□□ 2.11
CHPF-202ENST00000373891 EMILIN1Q9Y6C2 1016 aa28.23■■■□□ 2.11
CHPF-202ENST00000373891 CYP27B1O15528 508 aa28.22■■■□□ 2.11
CHPF-202ENST00000373891 PKD1L3Q7Z443 1732 aa28.22■■■□□ 2.11
CHPF-202ENST00000373891 MAP2P11137 1827 aaKnown RBP28.21■■■□□ 2.11
CHPF-202ENST00000373891 C4BP0C0L5 1744 aa28.21■■■□□ 2.11
CHPF-202ENST00000373891 NSD3Q9BZ95 1437 aa28.2■■■□□ 2.11
CHPF-202ENST00000373891 PPM1GO15355 546 aaPredicted RBP28.19■■■□□ 2.1
CHPF-202ENST00000373891 GIGYF1O75420 1035 aaPredicted RBP28.19■■■□□ 2.1
CHPF-202ENST00000373891 CARD14Q9BXL6 1004 aa28.19■■■□□ 2.1
CHPF-202ENST00000373891 UBR3Q6ZT12 1888 aa28.19■■■□□ 2.1
CHPF-202ENST00000373891 SMIM5Q71RC9 77 aa28.18■■■□□ 2.1
CHPF-202ENST00000373891 CDCA8Q53HL2 280 aa28.16■■■□□ 2.1
CHPF-202ENST00000373891 KIF24Q5T7B8 1368 aa28.15■■■□□ 2.1
CHPF-202ENST00000373891 PHF14O94880 888 aa28.15■■■□□ 2.1
CHPF-202ENST00000373891 AMIGO3Q86WK7 504 aa28.15■■■□□ 2.1
CHPF-202ENST00000373891 ANKRD26Q9UPS8 1709 aa28.15■■■□□ 2.1
CHPF-202ENST00000373891 GRIN3BO60391 1043 aa28.14■■■□□ 2.1
CHPF-202ENST00000373891 AK7Q96M32 723 aa28.14■■■□□ 2.1
CHPF-202ENST00000373891 PIGBQ92521 554 aa28.12■■■□□ 2.09
CHPF-202ENST00000373891 WWC3Q9ULE0 1092 aa28.12■■■□□ 2.09
CHPF-202ENST00000373891 FLAD1Q8NFF5 587 aa28.11■■■□□ 2.09
CHPF-202ENST00000373891 SMARCC1Q92922 1105 aaPredicted RBP28.11■■■□□ 2.09
CHPF-202ENST00000373891 CD2APQ9Y5K6 639 aa28.08■■■□□ 2.09
CHPF-202ENST00000373891 NCAPD2Q15021 1401 aa28.08■■■□□ 2.09
CHPF-202ENST00000373891 EYA1Q99502 592 aa28.07■■■□□ 2.08
CHPF-202ENST00000373891 POLR3GLQ9BT43 218 aa28.07■■■□□ 2.08
CHPF-202ENST00000373891 SPG7Q9UQ90 795 aa28.07■■■□□ 2.08
CHPF-202ENST00000373891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.06■■■□□ 2.08
CHPF-202ENST00000373891 ATP10DQ9P241 1426 aa28.06■■■□□ 2.08
CHPF-202ENST00000373891 LINC00116Q8NCU8 138 aa28.05■■■□□ 2.08
CHPF-202ENST00000373891 LOC102724428A0A0B4J2F2 783 aa28.04■■■□□ 2.08
CHPF-202ENST00000373891 SIK1P57059 783 aa28.04■■■□□ 2.08
CHPF-202ENST00000373891 NKX1-1Q15270 411 aaPredicted RBP28.04■■■□□ 2.08
CHPF-202ENST00000373891 WASHC2AQ641Q2 1341 aa28.03■■■□□ 2.08
CHPF-202ENST00000373891 HMGB2P26583 209 aaKnown RBP28.03■■■□□ 2.08
CHPF-202ENST00000373891 TNNT2P45379 298 aaPredicted RBP28.03■■■□□ 2.08
CHPF-202ENST00000373891 TMOD3Q9NYL9 352 aa28.03■■■□□ 2.08
CHPF-202ENST00000373891 ASAP1Q9ULH1 1129 aa28.03■■■□□ 2.08
CHPF-202ENST00000373891 IGSF1Q8N6C5 1336 aa28.01■■■□□ 2.07
CHPF-202ENST00000373891 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.07
CHPF-202ENST00000373891 ZNF526Q8TF50 670 aaPredicted RBP28.01■■■□□ 2.07
CHPF-202ENST00000373891 POLKQ9UBT6 870 aa28.01■■■□□ 2.07
CHPF-202ENST00000373891 ITPK1Q13572 414 aa28■■■□□ 2.07
CHPF-202ENST00000373891 GNPATO15228 680 aa27.99■■■□□ 2.07
CHPF-202ENST00000373891 PHKG2P15735 406 aa27.98■■■□□ 2.07
CHPF-202ENST00000373891 SSFA2P28290 1259 aa27.98■■■□□ 2.07
CHPF-202ENST00000373891 ATP6V1AP38606 617 aa27.98■■■□□ 2.07
CHPF-202ENST00000373891 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
CHPF-202ENST00000373891 EIF4A2Q14240 407 aaKnown RBP27.96■■■□□ 2.07
CHPF-202ENST00000373891 GPBP1L1Q9HC44 474 aaPredicted RBP27.96■■■□□ 2.07
CHPF-202ENST00000373891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.95■■■□□ 2.06
CHPF-202ENST00000373891 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms