RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SMC2O95347 1197 aa13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 TSPY26PQ9H489 355 aa13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 CFAP45Q9UL16 551 aa13.1□□□□□ -0.31
PHACTR4-202ENST00000373839 TNIP1Q15025 636 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 CCDC192P0DO97 292 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 MAGI1Q96QZ7 1491 aaPredicted RBP13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 ANKRD18AQ8IVF6 992 aa13.09□□□□□ -0.31
PHACTR4-202ENST00000373839 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.31
PHACTR4-202ENST00000373839 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 AKNAQ7Z591 1439 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 ZRSR2Q15696 482 aaKnown RBP13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 METTL24Q5JXM2 366 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 C1orf115Q9H7X2 142 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 ZNF76P36508 570 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
PHACTR4-202ENST00000373839 FIBPO43427 364 aa13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 CHD1LQ86WJ1 897 aa13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 CCDC196A0A1B0GTZ2 297 aa13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 GLRX3O76003 335 aaKnown RBP13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 ME1P48163 572 aa13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 ADGRL1O94910 1474 aa13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
PHACTR4-202ENST00000373839 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 ALDH1L2Q3SY69 923 aa13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 SERPINC1P01008 464 aa13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 DEF6Q9H4E7 631 aa13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 ZHX3Q9H4I2 956 aa13.06□□□□□ -0.32
PHACTR4-202ENST00000373839 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 PPP1R12BO60237 982 aaPredicted RBP13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 NSD2O96028 1365 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 TRAK2O60296 914 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
PHACTR4-202ENST00000373839 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 CAVIN1Q6NZI2 390 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 CRACR2BQ8N4Y2 399 aaPredicted RBP13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 KDM4AO75164 1064 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 FMNL2Q96PY5 1086 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 PRPF40AO75400 957 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 RNF41Q9H4P4 317 aaPredicted RBP13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
PHACTR4-202ENST00000373839 A0A087WZG4 1122 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 EXOC5O00471 708 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 SLC5A1P13866 664 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 USP5P45974 858 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 IFIT5Q13325 482 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 PATL2C9JE40 543 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 NFKBIBQ15653 356 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 RAB34Q9BZG1 259 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 ABCF2Q9UG63 623 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
PHACTR4-202ENST00000373839 BCAR3O75815 825 aa13.02□□□□□ -0.32
PHACTR4-202ENST00000373839 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.32
PHACTR4-202ENST00000373839 LDHCP07864 332 aa13.02□□□□□ -0.32
PHACTR4-202ENST00000373839 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.32
PHACTR4-202ENST00000373839 IL27Q8NEV9 243 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms