RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 SHANK3Q9BYB0 1731 aa27.25■■□□□ 1.95
SYNC-201ENST00000373484 RBM19Q9Y4C8 960 aaKnown RBP27.25■■□□□ 1.95
SYNC-201ENST00000373484 DIAPH1O60610 1272 aaKnown RBP27.23■■□□□ 1.95
SYNC-201ENST00000373484 OVOS2A0A0G2JMS6 1433 aa27.23■■□□□ 1.95
SYNC-201ENST00000373484 PDE3BQ13370 1112 aa27.23■■□□□ 1.95
SYNC-201ENST00000373484 PRKRIP1Q9H875 184 aaPredicted RBP27.23■■□□□ 1.95
SYNC-201ENST00000373484 CFAP53Q96M91 514 aa27.22■■□□□ 1.95
SYNC-201ENST00000373484 PKD1L3Q7Z443 1732 aa27.22■■□□□ 1.95
SYNC-201ENST00000373484 EXOC5O00471 708 aa27.21■■□□□ 1.95
SYNC-201ENST00000373484 RAPGEF4Q8WZA2 1011 aa27.21■■□□□ 1.95
SYNC-201ENST00000373484 MYBBP1AQ9BQG0 1328 aaKnown RBP27.19■■□□□ 1.94
SYNC-201ENST00000373484 TATP17735 454 aaPredicted RBP27.18■■□□□ 1.94
SYNC-201ENST00000373484 FAM182BQ5T319 152 aa27.18■■□□□ 1.94
SYNC-201ENST00000373484 SBF2Q86WG5 1849 aa27.18■■□□□ 1.94
SYNC-201ENST00000373484 KDRP35968 1356 aa27.18■■□□□ 1.94
SYNC-201ENST00000373484 SOCS7O14512 581 aa27.17■■□□□ 1.94
SYNC-201ENST00000373484 MARCH10Q8NA82 808 aaPredicted RBP27.16■■□□□ 1.94
SYNC-201ENST00000373484 PLEKHG2Q9H7P9 1386 aa27.15■■□□□ 1.94
SYNC-201ENST00000373484 SULT6B1Q6IMI4 303 aa27.14■■□□□ 1.94
SYNC-201ENST00000373484 AEBP1Q8IUX7 1158 aa27.14■■□□□ 1.94
SYNC-201ENST00000373484 ZCRB1Q8TBF4 217 aaKnown RBP27.14■■□□□ 1.94
SYNC-201ENST00000373484 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
SYNC-201ENST00000373484 FANCIQ9NVI1 1328 aa27.12■■□□□ 1.93
SYNC-201ENST00000373484 BCL9O00512 1426 aa27.12■■□□□ 1.93
SYNC-201ENST00000373484 UPF1Q92900 1129 aaKnown RBP eCLIP27.11■■□□□ 1.93
SYNC-201ENST00000373484 U2SURPO15042 1029 aaKnown RBP27.1■■□□□ 1.93
SYNC-201ENST00000373484 HNRNPUQ00839 825 aaKnown RBP eCLIP27.1■■□□□ 1.93
SYNC-201ENST00000373484 NUDCQ9Y266 331 aa27.1■■□□□ 1.93
SYNC-201ENST00000373484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.09■■□□□ 1.93
SYNC-201ENST00000373484 TNS1Q9HBL0 1735 aaKnown RBP27.09■■□□□ 1.93
SYNC-201ENST00000373484 HMOX1P09601 288 aa27.09■■□□□ 1.93
SYNC-201ENST00000373484 DDX54Q8TDD1 881 aaKnown RBP27.08■■□□□ 1.93
SYNC-201ENST00000373484 PCDH11XQ9BZA7 1347 aa27.07■■□□□ 1.92
SYNC-201ENST00000373484 PCDH11YQ9BZA8 1340 aa27.07■■□□□ 1.92
SYNC-201ENST00000373484 KAT6BQ8WYB5 2073 aa27.07■■□□□ 1.92
SYNC-201ENST00000373484 SPG7Q9UQ90 795 aa27.06■■□□□ 1.92
SYNC-201ENST00000373484 NHSQ6T4R5 1651 aa27.05■■□□□ 1.92
SYNC-201ENST00000373484 DOT1LQ8TEK3 1739 aa27.05■■□□□ 1.92
SYNC-201ENST00000373484 CYP27B1O15528 508 aa27.03■■□□□ 1.92
SYNC-201ENST00000373484 CCDC125Q86Z20 511 aa27.03■■□□□ 1.92
SYNC-201ENST00000373484 U2AF1L5P0DN76 240 aaPredicted RBP27.02■■□□□ 1.92
SYNC-201ENST00000373484 U2AF1Q01081 240 aaKnown RBP eCLIP27.02■■□□□ 1.92
SYNC-201ENST00000373484 AMOTQ4VCS5 1084 aa27.02■■□□□ 1.92
SYNC-201ENST00000373484 PLEKHO1Q53GL0 409 aaPredicted RBP27.02■■□□□ 1.92
SYNC-201ENST00000373484 TRIM37O94972 964 aa27■■□□□ 1.91
SYNC-201ENST00000373484 RSPH6AQ9H0K4 717 aa27■■□□□ 1.91
SYNC-201ENST00000373484 TOGARAM1Q9Y4F4 1720 aa27■■□□□ 1.91
SYNC-201ENST00000373484 VIRMAQ69YN4 1812 aaKnown RBP27■■□□□ 1.91
SYNC-201ENST00000373484 PPP4R2Q9NY27 417 aa27■■□□□ 1.91
SYNC-201ENST00000373484 ITGB4P16144 1822 aa26.98■■□□□ 1.91
SYNC-201ENST00000373484 IFNL2Q8IZJ0 200 aa26.98■■□□□ 1.91
SYNC-201ENST00000373484 ZBED9Q6R2W3 1325 aa26.98■■□□□ 1.91
SYNC-201ENST00000373484 FCHSD2O94868 740 aa26.97■■□□□ 1.91
SYNC-201ENST00000373484 PHKG2P15735 406 aa26.97■■□□□ 1.91
SYNC-201ENST00000373484 BTAF1O14981 1849 aa26.96■■□□□ 1.91
SYNC-201ENST00000373484 PRKAR2BP31323 418 aa26.96■■□□□ 1.91
SYNC-201ENST00000373484 NKX1-1Q15270 411 aaPredicted RBP26.96■■□□□ 1.91
SYNC-201ENST00000373484 SF3B2Q13435 895 aaKnown RBP26.95■■□□□ 1.91
SYNC-201ENST00000373484 ZNF530Q6P9A1 599 aaPredicted RBP26.95■■□□□ 1.91
SYNC-201ENST00000373484 ACSBG1Q96GR2 724 aa26.95■■□□□ 1.91
SYNC-201ENST00000373484 BCL11BQ9C0K0 894 aaPredicted RBP26.95■■□□□ 1.9
SYNC-201ENST00000373484 SCN11AQ9UI33 1791 aa26.94■■□□□ 1.9
SYNC-201ENST00000373484 KCNQ2O43526 872 aa26.93■■□□□ 1.9
SYNC-201ENST00000373484 MTHFSDQ2M296 383 aaKnown RBP26.93■■□□□ 1.9
SYNC-201ENST00000373484 PTF1AQ7RTS3 328 aa26.93■■□□□ 1.9
SYNC-201ENST00000373484 RGPD3A6NKT7 1758 aaPredicted RBP26.92■■□□□ 1.9
SYNC-201ENST00000373484 RGPD4Q7Z3J3 1758 aa26.92■■□□□ 1.9
SYNC-201ENST00000373484 CCDC184Q52MB2 194 aa26.91■■□□□ 1.9
SYNC-201ENST00000373484 C1orf141Q5JVX7 400 aa26.91■■□□□ 1.9
SYNC-201ENST00000373484 PHACTR3Q96KR7 559 aa26.9■■□□□ 1.9
SYNC-201ENST00000373484 HSP90AB1P08238 724 aaKnown RBP26.9■■□□□ 1.9
SYNC-201ENST00000373484 ADAMTS7Q9UKP4 1686 aa26.89■■□□□ 1.9
SYNC-201ENST00000373484 AKAP4Q5JQC9 854 aa26.89■■□□□ 1.9
SYNC-201ENST00000373484 KDM6AO15550 1401 aaPredicted RBP26.89■■□□□ 1.89
SYNC-201ENST00000373484 DLG5Q8TDM6 1919 aa26.88■■□□□ 1.89
SYNC-201ENST00000373484 APBA3O96018 575 aa26.88■■□□□ 1.89
SYNC-201ENST00000373484 BAG6P46379 1132 aa26.88■■□□□ 1.89
SYNC-201ENST00000373484 PRIM1P49642 420 aaKnown RBP26.88■■□□□ 1.89
SYNC-201ENST00000373484 WDR43Q15061 677 aaKnown RBP eCLIP26.88■■□□□ 1.89
SYNC-201ENST00000373484 DEFB132Q7Z7B7 95 aa26.88■■□□□ 1.89
SYNC-201ENST00000373484 GAS2L2Q8NHY3 880 aa26.88■■□□□ 1.89
SYNC-201ENST00000373484 PLEKHF1Q96S99 279 aa26.88■■□□□ 1.89
SYNC-201ENST00000373484 DCAF5Q96JK2 942 aa26.87■■□□□ 1.89
SYNC-201ENST00000373484 SYTL4Q96C24 671 aaPredicted RBP26.86■■□□□ 1.89
SYNC-201ENST00000373484 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
SYNC-201ENST00000373484 RREB1Q92766 1687 aa26.85■■□□□ 1.89
SYNC-201ENST00000373484 MRS2Q9HD23 443 aa26.84■■□□□ 1.89
SYNC-201ENST00000373484 EN1Q05925 392 aaPredicted RBP26.83■■□□□ 1.89
SYNC-201ENST00000373484 MPRIPQ6WCQ1 1025 aa26.83■■□□□ 1.89
SYNC-201ENST00000373484 ADAMTS8Q9UP79 889 aa26.83■■□□□ 1.89
SYNC-201ENST00000373484 PLSCR1O15162 318 aa26.83■■□□□ 1.89
SYNC-201ENST00000373484 NEFMP07197 916 aa26.83■■□□□ 1.89
SYNC-201ENST00000373484 MAP3K5Q99683 1374 aa26.83■■□□□ 1.88
SYNC-201ENST00000373484 LY75O60449 1722 aa26.82■■□□□ 1.88
SYNC-201ENST00000373484 ERVV-2B6SEH9 535 aa26.81■■□□□ 1.88
SYNC-201ENST00000373484 CAMKK2Q96RR4 588 aa26.81■■□□□ 1.88
SYNC-201ENST00000373484 MAPK8IP3Q9UPT6 1336 aa26.8■■□□□ 1.88
SYNC-201ENST00000373484 MRC1P22897 1456 aa26.8■■□□□ 1.88
SYNC-201ENST00000373484 GNAT3A8MTJ3 354 aa26.79■■□□□ 1.88
SYNC-201ENST00000373484 MSH5O43196 834 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms