RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 USP26Q9BXU7 913 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 USP31Q70CQ4 1352 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 TSPOAP1O95153 1857 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 OSCARQ8IYS5 282 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 API5Q9BZZ5 524 aaKnown RBP9.31□□□□□ -0.92
GARNL3-202ENST00000373387 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 IL17RAQ96F46 866 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 PIK3C2AO00443 1686 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 RGPD8O14715 1765 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-202ENST00000373387 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
GARNL3-202ENST00000373387 MSH6P52701 1360 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 CHL1O00533 1208 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 SSFA2P28290 1259 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 LMOD3Q0VAK6 560 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 KLHL40Q2TBA0 621 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 PRR36Q9H6K5 1346 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 NWD1Q149M9 1564 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.3□□□□□ -0.92
GARNL3-202ENST00000373387 KIF13AQ9H1H9 1805 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 FAM83GA6ND36 823 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
GARNL3-202ENST00000373387 BAG4O95429 457 aaKnown RBP9.29□□□□□ -0.92
GARNL3-202ENST00000373387 OSBPL3Q9H4L5 887 aa9.29□□□□□ -0.92
GARNL3-202ENST00000373387 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
GARNL3-202ENST00000373387 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
GARNL3-202ENST00000373387 ZNF445P59923 1031 aa9.29□□□□□ -0.92
GARNL3-202ENST00000373387 RABEP1Q15276 862 aa9.29□□□□□ -0.92
GARNL3-202ENST00000373387 ESPNB1AK53 854 aa9.29□□□□□ -0.92
GARNL3-202ENST00000373387 PTPRCP08575 1304 aa9.28□□□□□ -0.92
GARNL3-202ENST00000373387 ARHGEF10O15013 1369 aa9.28□□□□□ -0.92
GARNL3-202ENST00000373387 RPAP2Q8IXW5 612 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-202ENST00000373387 KDRP35968 1356 aa9.28□□□□□ -0.92
GARNL3-202ENST00000373387 LMBRD1Q9NUN5 540 aa9.28□□□□□ -0.92
GARNL3-202ENST00000373387 ZDHHC9Q9Y397 364 aa9.28□□□□□ -0.92
GARNL3-202ENST00000373387 C16orf71Q8IYS4 520 aaPredicted RBP9.27□□□□□ -0.92
GARNL3-202ENST00000373387 OTUD7AQ8TE49 926 aaPredicted RBP9.27□□□□□ -0.92
GARNL3-202ENST00000373387 USP6P35125 1406 aa9.27□□□□□ -0.93
GARNL3-202ENST00000373387 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
GARNL3-202ENST00000373387 EIF5BO60841 1220 aaKnown RBP9.27□□□□□ -0.93
GARNL3-202ENST00000373387 EIF4A2Q14240 407 aaKnown RBP9.27□□□□□ -0.93
GARNL3-202ENST00000373387 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
GARNL3-202ENST00000373387 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
GARNL3-202ENST00000373387 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
GARNL3-202ENST00000373387 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
GARNL3-202ENST00000373387 DIP2AQ14689 1571 aa9.27□□□□□ -0.93
GARNL3-202ENST00000373387 CEP170BQ9Y4F5 1589 aaPredicted RBP9.27□□□□□ -0.93
GARNL3-202ENST00000373387 SDSP20132 328 aa9.26□□□□□ -0.93
GARNL3-202ENST00000373387 PDLIM2Q96JY6 352 aa9.26□□□□□ -0.93
GARNL3-202ENST00000373387 ROBO2Q9HCK4 1378 aa9.26□□□□□ -0.93
GARNL3-202ENST00000373387 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
GARNL3-202ENST00000373387 RRS1Q15050 365 aaKnown RBP9.26□□□□□ -0.93
GARNL3-202ENST00000373387 ELL2O00472 640 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-202ENST00000373387 PKP1Q13835 747 aa9.26□□□□□ -0.93
GARNL3-202ENST00000373387 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
GARNL3-202ENST00000373387 CCDC173Q0VFZ6 552 aa9.25□□□□□ -0.93
GARNL3-202ENST00000373387 KRT24Q2M2I5 525 aa9.25□□□□□ -0.93
GARNL3-202ENST00000373387 AEBP1Q8IUX7 1158 aa9.25□□□□□ -0.93
GARNL3-202ENST00000373387 COG3Q96JB2 828 aa9.25□□□□□ -0.93
GARNL3-202ENST00000373387 PTPRUQ92729 1446 aa9.24□□□□□ -0.93
GARNL3-202ENST00000373387 PHRF1Q9P1Y6 1649 aaKnown RBP9.24□□□□□ -0.93
GARNL3-202ENST00000373387 CWC22Q9HCG8 908 aaKnown RBP9.24□□□□□ -0.93
GARNL3-202ENST00000373387 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.24□□□□□ -0.93
GARNL3-202ENST00000373387 CHD2O14647 1828 aaKnown RBP9.24□□□□□ -0.93
GARNL3-202ENST00000373387 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
GARNL3-202ENST00000373387 NUCB2P80303 420 aa9.24□□□□□ -0.93
GARNL3-202ENST00000373387 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
GARNL3-202ENST00000373387 MEIS3Q99687 375 aa9.24□□□□□ -0.93
GARNL3-202ENST00000373387 SENP3Q9H4L4 574 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-202ENST00000373387 TCHHQ07283 1943 aa9.24□□□□□ -0.93
GARNL3-202ENST00000373387 TTC21BQ7Z4L5 1316 aa9.23□□□□□ -0.93
GARNL3-202ENST00000373387 ARXQ96QS3 562 aa9.23□□□□□ -0.93
GARNL3-202ENST00000373387 FOXD4L1Q9NU39 408 aa9.23□□□□□ -0.93
GARNL3-202ENST00000373387 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
GARNL3-202ENST00000373387 HS1BP3Q53T59 392 aa9.23□□□□□ -0.93
GARNL3-202ENST00000373387 LTN1O94822 1766 aa9.23□□□□□ -0.93
GARNL3-202ENST00000373387 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
GARNL3-202ENST00000373387 TMEM2Q9UHN6 1383 aa9.22□□□□□ -0.93
GARNL3-202ENST00000373387 CUL4AQ13619 759 aa9.22□□□□□ -0.93
GARNL3-202ENST00000373387 ZGPATQ8N5A5 531 aaKnown RBP9.22□□□□□ -0.93
GARNL3-202ENST00000373387 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.22□□□□□ -0.93
GARNL3-202ENST00000373387 SMARCA5O60264 1052 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-202ENST00000373387 NASPP49321 788 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-202ENST00000373387 SLIT1O75093 1534 aa9.22□□□□□ -0.93
GARNL3-202ENST00000373387 HAP1P54257 671 aaPredicted RBP9.21□□□□□ -0.93
GARNL3-202ENST00000373387 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.93
GARNL3-202ENST00000373387 PDE1AP54750 535 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 SULT6B1Q6IMI4 303 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 TXNDC2Q86VQ3 553 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 SIPA1L3O60292 1781 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-202ENST00000373387 PLEKHG1Q9ULL1 1385 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 MCM10Q7L590 875 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 RBSNQ9H1K0 784 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 MAP3K19Q56UN5 1328 aa9.21□□□□□ -0.94
GARNL3-202ENST00000373387 TERF1P54274 439 aa9.2□□□□□ -0.94
GARNL3-202ENST00000373387 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
GARNL3-202ENST00000373387 G2E3Q7L622 706 aa9.2□□□□□ -0.94
GARNL3-202ENST00000373387 ZSCAN30Q86W11 494 aa9.2□□□□□ -0.94
GARNL3-202ENST00000373387 STAP2Q9UGK3 403 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms