RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
C9orf16-201ENST00000372994 USHBP1Q8N6Y0 703 aa20.66■□□□□ 0.9
C9orf16-201ENST00000372994 RAPGEF4Q8WZA2 1011 aa20.66■□□□□ 0.9
C9orf16-201ENST00000372994 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
C9orf16-201ENST00000372994 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
C9orf16-201ENST00000372994 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
C9orf16-201ENST00000372994 BTAF1O14981 1849 aa20.63■□□□□ 0.89
C9orf16-201ENST00000372994 TATP17735 454 aaPredicted RBP20.63■□□□□ 0.89
C9orf16-201ENST00000372994 ANO8Q9HCE9 1232 aaPredicted RBP20.63■□□□□ 0.89
C9orf16-201ENST00000372994 NSD2O96028 1365 aa20.62■□□□□ 0.89
C9orf16-201ENST00000372994 KIF7Q2M1P5 1343 aa20.62■□□□□ 0.89
C9orf16-201ENST00000372994 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
C9orf16-201ENST00000372994 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
C9orf16-201ENST00000372994 PRIM1P49642 420 aaKnown RBP20.59■□□□□ 0.89
C9orf16-201ENST00000372994 EYA1Q99502 592 aa20.59■□□□□ 0.89
C9orf16-201ENST00000372994 KNSTRNQ9Y448 316 aa20.59■□□□□ 0.89
C9orf16-201ENST00000372994 SLC15A2Q16348 729 aa20.57■□□□□ 0.88
C9orf16-201ENST00000372994 STK32BQ9NY57 414 aa20.57■□□□□ 0.88
C9orf16-201ENST00000372994 PCDH11XQ9BZA7 1347 aa20.56■□□□□ 0.88
C9orf16-201ENST00000372994 PCDH11YQ9BZA8 1340 aa20.56■□□□□ 0.88
C9orf16-201ENST00000372994 MORC1Q86VD1 984 aa20.56■□□□□ 0.88
C9orf16-201ENST00000372994 SYTL4Q96C24 671 aaPredicted RBP20.56■□□□□ 0.88
C9orf16-201ENST00000372994 DOT1LQ8TEK3 1739 aa20.56■□□□□ 0.88
C9orf16-201ENST00000372994 CYP27B1O15528 508 aa20.55■□□□□ 0.88
C9orf16-201ENST00000372994 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
C9orf16-201ENST00000372994 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
C9orf16-201ENST00000372994 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
C9orf16-201ENST00000372994 LRRC4BQ9NT99 713 aa20.55■□□□□ 0.88
C9orf16-201ENST00000372994 SLC27A3Q5K4L6 730 aa20.54■□□□□ 0.88
C9orf16-201ENST00000372994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.54■□□□□ 0.88
C9orf16-201ENST00000372994 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
C9orf16-201ENST00000372994 PDGFDQ9GZP0 370 aaPredicted RBP20.53■□□□□ 0.88
C9orf16-201ENST00000372994 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
C9orf16-201ENST00000372994 PKD1L3Q7Z443 1732 aa20.53■□□□□ 0.88
C9orf16-201ENST00000372994 SPG7Q9UQ90 795 aa20.52■□□□□ 0.88
C9orf16-201ENST00000372994 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
C9orf16-201ENST00000372994 NKX1-1Q15270 411 aaPredicted RBP20.51■□□□□ 0.87
C9orf16-201ENST00000372994 IGSF1Q8N6C5 1336 aa20.5■□□□□ 0.87
C9orf16-201ENST00000372994 PLEKHG2Q9H7P9 1386 aa20.49■□□□□ 0.87
C9orf16-201ENST00000372994 LY75O60449 1722 aa20.49■□□□□ 0.87
C9orf16-201ENST00000372994 AKT1S1Q96B36 256 aa20.48■□□□□ 0.87
C9orf16-201ENST00000372994 ZNF827Q17R98 1081 aa20.47■□□□□ 0.87
C9orf16-201ENST00000372994 ZBTB7AO95365 584 aa20.46■□□□□ 0.87
C9orf16-201ENST00000372994 KCNQ4P56696 695 aa20.45■□□□□ 0.86
C9orf16-201ENST00000372994 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
C9orf16-201ENST00000372994 ITGB4P16144 1822 aa20.45■□□□□ 0.86
C9orf16-201ENST00000372994 PHKG2P15735 406 aa20.44■□□□□ 0.86
C9orf16-201ENST00000372994 PTGER2P43116 358 aa20.44■□□□□ 0.86
C9orf16-201ENST00000372994 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
C9orf16-201ENST00000372994 MTFR1LQ9H019 292 aa20.44■□□□□ 0.86
C9orf16-201ENST00000372994 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
C9orf16-201ENST00000372994 CCNL1Q9UK58 526 aaPredicted RBP20.44■□□□□ 0.86
C9orf16-201ENST00000372994 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
C9orf16-201ENST00000372994 ATF5Q9Y2D1 282 aaPredicted RBP20.43■□□□□ 0.86
C9orf16-201ENST00000372994 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
C9orf16-201ENST00000372994 IL13P35225 146 aa20.42■□□□□ 0.86
C9orf16-201ENST00000372994 PIGBQ92521 554 aa20.42■□□□□ 0.86
C9orf16-201ENST00000372994 MTHFSP49914 203 aa20.41■□□□□ 0.86
C9orf16-201ENST00000372994 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
C9orf16-201ENST00000372994 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
C9orf16-201ENST00000372994 QSER1Q2KHR3 1735 aa20.41■□□□□ 0.86
C9orf16-201ENST00000372994 HMGB2P26583 209 aaKnown RBP20.4■□□□□ 0.86
C9orf16-201ENST00000372994 PLEKHO1Q53GL0 409 aaPredicted RBP20.4■□□□□ 0.86
C9orf16-201ENST00000372994 PALLDQ8WX93 1383 aa20.4■□□□□ 0.86
C9orf16-201ENST00000372994 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
C9orf16-201ENST00000372994 TFCP2L1Q9NZI6 479 aa20.4■□□□□ 0.86
C9orf16-201ENST00000372994 KDRP35968 1356 aa20.39■□□□□ 0.85
C9orf16-201ENST00000372994 PNPLA7Q6ZV29 1317 aa20.39■□□□□ 0.85
C9orf16-201ENST00000372994 AMOTQ4VCS5 1084 aa20.39■□□□□ 0.85
C9orf16-201ENST00000372994 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
C9orf16-201ENST00000372994 SLC16A10Q8TF71 515 aa20.39■□□□□ 0.85
C9orf16-201ENST00000372994 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
C9orf16-201ENST00000372994 TMOD3Q9NYL9 352 aa20.37■□□□□ 0.85
C9orf16-201ENST00000372994 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
C9orf16-201ENST00000372994 DCAF5Q96JK2 942 aa20.36■□□□□ 0.85
C9orf16-201ENST00000372994 TUBGCP6Q96RT7 1819 aa20.36■□□□□ 0.85
C9orf16-201ENST00000372994 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
C9orf16-201ENST00000372994 ERVV-2B6SEH9 535 aa20.35■□□□□ 0.85
C9orf16-201ENST00000372994 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
C9orf16-201ENST00000372994 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
C9orf16-201ENST00000372994 C5P01031 1676 aa20.34■□□□□ 0.85
C9orf16-201ENST00000372994 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
C9orf16-201ENST00000372994 DIAPH1O60610 1272 aaKnown RBP20.32■□□□□ 0.84
C9orf16-201ENST00000372994 SIK1P57059 783 aa20.32■□□□□ 0.84
C9orf16-201ENST00000372994 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
C9orf16-201ENST00000372994 COL24A1Q17RW2 1714 aa20.32■□□□□ 0.84
C9orf16-201ENST00000372994 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
C9orf16-201ENST00000372994 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
C9orf16-201ENST00000372994 ARXQ96QS3 562 aa20.31■□□□□ 0.84
C9orf16-201ENST00000372994 KDM6AO15550 1401 aaPredicted RBP20.3■□□□□ 0.84
C9orf16-201ENST00000372994 FHDC1Q9C0D6 1143 aaPredicted RBP20.3■□□□□ 0.84
C9orf16-201ENST00000372994 FLAD1Q8NFF5 587 aa20.29■□□□□ 0.84
C9orf16-201ENST00000372994 SYT17Q9BSW7 474 aa20.29■□□□□ 0.84
C9orf16-201ENST00000372994 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
C9orf16-201ENST00000372994 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
C9orf16-201ENST00000372994 HMOX1P09601 288 aa20.27■□□□□ 0.84
C9orf16-201ENST00000372994 POLD1P28340 1107 aa20.27■□□□□ 0.84
C9orf16-201ENST00000372994 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
C9orf16-201ENST00000372994 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 MSH5O43196 834 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms