RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PIK3C2GO75747 1445 aa12.5□□□□□ -0.41
NUP188-201ENST00000372577 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
NUP188-201ENST00000372577 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
NUP188-201ENST00000372577 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
NUP188-201ENST00000372577 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
NUP188-201ENST00000372577 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
NUP188-201ENST00000372577 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
NUP188-201ENST00000372577 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
NUP188-201ENST00000372577 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
NUP188-201ENST00000372577 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
NUP188-201ENST00000372577 A0A0U1RQG5 324 aaPredicted RBP12.5□□□□□ -0.41
NUP188-201ENST00000372577 MCM10Q7L590 875 aa12.49□□□□□ -0.41
NUP188-201ENST00000372577 CAVIN1Q6NZI2 390 aaKnown RBP12.49□□□□□ -0.41
NUP188-201ENST00000372577 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
NUP188-201ENST00000372577 CEP126Q9P2H0 1117 aa12.49□□□□□ -0.41
NUP188-201ENST00000372577 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
NUP188-201ENST00000372577 BLOC1S2Q6QNY1 142 aa12.49□□□□□ -0.41
NUP188-201ENST00000372577 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
NUP188-201ENST00000372577 PLEKHH1Q9ULM0 1364 aa12.49□□□□□ -0.41
NUP188-201ENST00000372577 MX1P20591 662 aa12.48□□□□□ -0.41
NUP188-201ENST00000372577 PZPP20742 1482 aa12.48□□□□□ -0.41
NUP188-201ENST00000372577 MYL6BP14649 208 aa12.48□□□□□ -0.41
NUP188-201ENST00000372577 STARD3NLO95772 234 aa12.48□□□□□ -0.41
NUP188-201ENST00000372577 KRT85P78386 507 aa12.48□□□□□ -0.41
NUP188-201ENST00000372577 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
NUP188-201ENST00000372577 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
NUP188-201ENST00000372577 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
NUP188-201ENST00000372577 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
NUP188-201ENST00000372577 CDKL5O76039 1030 aa12.47□□□□□ -0.41
NUP188-201ENST00000372577 TRIM27P14373 513 aa12.47□□□□□ -0.41
NUP188-201ENST00000372577 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
NUP188-201ENST00000372577 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
NUP188-201ENST00000372577 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
NUP188-201ENST00000372577 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
NUP188-201ENST00000372577 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
NUP188-201ENST00000372577 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
NUP188-201ENST00000372577 SIL1Q9H173 461 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 PDRG1Q9NUG6 133 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 AKAP2Q9Y2D5 859 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 RIMS2Q9UQ26 1411 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.41
NUP188-201ENST00000372577 FBXW7Q969H0 707 aa12.46□□□□□ -0.42
NUP188-201ENST00000372577 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.42
NUP188-201ENST00000372577 CCP110O43303 1012 aa12.46□□□□□ -0.42
NUP188-201ENST00000372577 MCM4P33991 863 aa12.46□□□□□ -0.42
NUP188-201ENST00000372577 STK38Q15208 465 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 COL17A1Q9UMD9 1497 aaPredicted RBP12.45□□□□□ -0.42
NUP188-201ENST00000372577 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 TXLNAP40222 546 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 TESK2Q96S53 571 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 ACEP12821 1306 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 FOSBP53539 338 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 HDAC1Q13547 482 aaPredicted RBP12.45□□□□□ -0.42
NUP188-201ENST00000372577 PIK3R4Q99570 1358 aa12.45□□□□□ -0.42
NUP188-201ENST00000372577 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
NUP188-201ENST00000372577 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 RAD21O60216 631 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 ZC3H6P61129 1189 aaKnown RBP12.44□□□□□ -0.42
NUP188-201ENST00000372577 CFAP45Q9UL16 551 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 LARP1BQ659C4 914 aaKnown RBP12.44□□□□□ -0.42
NUP188-201ENST00000372577 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 INSRP06213 1382 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 FIBPO43427 364 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
NUP188-201ENST00000372577 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
NUP188-201ENST00000372577 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
NUP188-201ENST00000372577 FYB1O15117 783 aa12.43□□□□□ -0.42
NUP188-201ENST00000372577 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
NUP188-201ENST00000372577 ADGBQ8N7X0 1667 aa12.43□□□□□ -0.42
NUP188-201ENST00000372577 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
NUP188-201ENST00000372577 CWC27Q6UX04 472 aaKnown RBP12.43□□□□□ -0.42
NUP188-201ENST00000372577 FLIIQ13045 1269 aa12.43□□□□□ -0.42
NUP188-201ENST00000372577 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
NUP188-201ENST00000372577 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
NUP188-201ENST00000372577 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 ARGLU1Q9NWB6 273 aaPredicted RBP12.42□□□□□ -0.42
NUP188-201ENST00000372577 WASF1Q92558 559 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 TRIM5Q9C035 493 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 CCDC69A6NI79 296 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 MIS18AQ9NYP9 233 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
NUP188-201ENST00000372577 FILIP1LQ4L180 1135 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
NUP188-201ENST00000372577 ZNF652Q9Y2D9 606 aa12.42□□□□□ -0.42
NUP188-201ENST00000372577 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 ARHGEF5Q12774 1597 aa12.41□□□□□ -0.42
NUP188-201ENST00000372577 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 ATP7AQ04656 1500 aa12.41□□□□□ -0.42
NUP188-201ENST00000372577 IMMTQ16891 758 aaKnown RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms