RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 KIAA0232Q92628 1395 aa22.69■■□□□ 1.22
CTSA-204ENST00000372484 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
CTSA-204ENST00000372484 IP6K1Q92551 441 aa22.68■■□□□ 1.22
CTSA-204ENST00000372484 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
CTSA-204ENST00000372484 ZBTB47Q9UFB7 747 aaPredicted RBP22.67■■□□□ 1.22
CTSA-204ENST00000372484 CHMP4BQ9H444 224 aaKnown RBP22.67■■□□□ 1.22
CTSA-204ENST00000372484 ABCC4O15439 1325 aa22.67■■□□□ 1.22
CTSA-204ENST00000372484 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
CTSA-204ENST00000372484 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
CTSA-204ENST00000372484 VIRMAQ69YN4 1812 aaKnown RBP22.66■■□□□ 1.22
CTSA-204ENST00000372484 HTATSF1O43719 755 aaKnown RBP22.65■■□□□ 1.22
CTSA-204ENST00000372484 MIS18AQ9NYP9 233 aa22.65■■□□□ 1.22
CTSA-204ENST00000372484 ZBTB7CA1YPR0 619 aa22.64■■□□□ 1.22
CTSA-204ENST00000372484 ZBTB7BO15156 539 aaPredicted RBP22.64■■□□□ 1.22
CTSA-204ENST00000372484 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.22
CTSA-204ENST00000372484 GNAT3A8MTJ3 354 aa22.64■■□□□ 1.21
CTSA-204ENST00000372484 USHBP1Q8N6Y0 703 aa22.63■■□□□ 1.21
CTSA-204ENST00000372484 C1orf167Q5SNV9 1468 aa22.63■■□□□ 1.21
CTSA-204ENST00000372484 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
CTSA-204ENST00000372484 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
CTSA-204ENST00000372484 PHRF1Q9P1Y6 1649 aaKnown RBP22.62■■□□□ 1.21
CTSA-204ENST00000372484 GCP02774 474 aa22.61■■□□□ 1.21
CTSA-204ENST00000372484 SMC5Q8IY18 1101 aa22.61■■□□□ 1.21
CTSA-204ENST00000372484 MAP3K5Q99683 1374 aa22.61■■□□□ 1.21
CTSA-204ENST00000372484 PLEKHG5O94827 1062 aa22.6■■□□□ 1.21
CTSA-204ENST00000372484 KRT28Q7Z3Y7 464 aa22.6■■□□□ 1.21
CTSA-204ENST00000372484 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
CTSA-204ENST00000372484 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
CTSA-204ENST00000372484 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
CTSA-204ENST00000372484 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
CTSA-204ENST00000372484 ATF3P18847 181 aa22.58■■□□□ 1.21
CTSA-204ENST00000372484 SLIT3O75094 1523 aa22.58■■□□□ 1.21
CTSA-204ENST00000372484 TMEM94Q12767 1356 aa22.58■■□□□ 1.2
CTSA-204ENST00000372484 MSH6P52701 1360 aa22.57■■□□□ 1.2
CTSA-204ENST00000372484 STRCP1A6NGW2 1772 aa22.57■■□□□ 1.2
CTSA-204ENST00000372484 RGPD2P0DJD1 1756 aa22.57■■□□□ 1.2
CTSA-204ENST00000372484 ARHGEF25Q86VW2 580 aa22.57■■□□□ 1.2
CTSA-204ENST00000372484 DDRGK1Q96HY6 314 aa22.57■■□□□ 1.2
CTSA-204ENST00000372484 C1orf115Q9H7X2 142 aa22.57■■□□□ 1.2
CTSA-204ENST00000372484 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
CTSA-204ENST00000372484 PTPRCP08575 1304 aa22.56■■□□□ 1.2
CTSA-204ENST00000372484 SLC4A2P04920 1241 aa22.55■■□□□ 1.2
CTSA-204ENST00000372484 USP19O94966 1318 aa22.55■■□□□ 1.2
CTSA-204ENST00000372484 RGS12O14924 1447 aa22.54■■□□□ 1.2
CTSA-204ENST00000372484 INTS3Q68E01 1043 aaKnown RBP22.54■■□□□ 1.2
CTSA-204ENST00000372484 LRRC59Q96AG4 307 aaKnown RBP22.54■■□□□ 1.2
CTSA-204ENST00000372484 MST1RQ04912 1400 aa22.53■■□□□ 1.2
CTSA-204ENST00000372484 HSPA2P54652 639 aa22.53■■□□□ 1.2
CTSA-204ENST00000372484 TAF7Q15545 349 aaPredicted RBP22.52■■□□□ 1.2
CTSA-204ENST00000372484 DCCP43146 1447 aa22.52■■□□□ 1.2
CTSA-204ENST00000372484 NUCB1Q02818 461 aa22.52■■□□□ 1.2
CTSA-204ENST00000372484 NCOA3Q9Y6Q9 1424 aa22.52■■□□□ 1.19
CTSA-204ENST00000372484 BABAM1Q9NWV8 329 aa22.51■■□□□ 1.19
CTSA-204ENST00000372484 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
CTSA-204ENST00000372484 ALS2Q96Q42 1657 aa22.5■■□□□ 1.19
CTSA-204ENST00000372484 SEC24BO95487 1268 aa22.49■■□□□ 1.19
CTSA-204ENST00000372484 SIRT2Q8IXJ6 389 aa22.49■■□□□ 1.19
CTSA-204ENST00000372484 ANKRD24Q8TF21 1146 aa22.49■■□□□ 1.19
CTSA-204ENST00000372484 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
CTSA-204ENST00000372484 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
CTSA-204ENST00000372484 MYT1Q01538 1121 aa22.48■■□□□ 1.19
CTSA-204ENST00000372484 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
CTSA-204ENST00000372484 LNPKQ9C0E8 428 aa22.48■■□□□ 1.19
CTSA-204ENST00000372484 CEMIPQ8WUJ3 1361 aa22.47■■□□□ 1.19
CTSA-204ENST00000372484 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
CTSA-204ENST00000372484 PLEKHO1Q53GL0 409 aaPredicted RBP22.46■■□□□ 1.19
CTSA-204ENST00000372484 G2E3Q7L622 706 aa22.46■■□□□ 1.19
CTSA-204ENST00000372484 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
CTSA-204ENST00000372484 AXIN2Q9Y2T1 843 aa22.46■■□□□ 1.19
CTSA-204ENST00000372484 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
CTSA-204ENST00000372484 RGPD5Q99666 1765 aa22.45■■□□□ 1.19
CTSA-204ENST00000372484 FAM208AQ9UK61 1670 aaKnown RBP22.45■■□□□ 1.18
CTSA-204ENST00000372484 ANKRD45Q5TZF3 282 aa22.45■■□□□ 1.18
CTSA-204ENST00000372484 ZNF530Q6P9A1 599 aaPredicted RBP22.45■■□□□ 1.18
CTSA-204ENST00000372484 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
CTSA-204ENST00000372484 CACNA1FO60840 1977 aa22.45■■□□□ 1.18
CTSA-204ENST00000372484 LMO7Q8WWI1 1683 aa22.45■■□□□ 1.18
CTSA-204ENST00000372484 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
CTSA-204ENST00000372484 AMOTQ4VCS5 1084 aa22.45■■□□□ 1.18
CTSA-204ENST00000372484 LGR6Q9HBX8 967 aa22.45■■□□□ 1.18
CTSA-204ENST00000372484 MED1Q15648 1581 aaPredicted RBP22.44■■□□□ 1.18
CTSA-204ENST00000372484 AKAP4Q5JQC9 854 aa22.44■■□□□ 1.18
CTSA-204ENST00000372484 UPF2Q9HAU5 1272 aaKnown RBP22.43■■□□□ 1.18
CTSA-204ENST00000372484 NPHP3Q7Z494 1330 aa22.43■■□□□ 1.18
CTSA-204ENST00000372484 NECTIN2Q92692 538 aa22.43■■□□□ 1.18
CTSA-204ENST00000372484 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
CTSA-204ENST00000372484 SLC4A10Q6U841 1118 aa22.42■■□□□ 1.18
CTSA-204ENST00000372484 CAMTA1Q9Y6Y1 1673 aa22.42■■□□□ 1.18
CTSA-204ENST00000372484 F6X3S4 739 aa22.42■■□□□ 1.18
CTSA-204ENST00000372484 CCT4P50991 539 aaKnown RBP22.41■■□□□ 1.18
CTSA-204ENST00000372484 FLIIQ13045 1269 aa22.41■■□□□ 1.18
CTSA-204ENST00000372484 C1orf141Q5JVX7 400 aa22.41■■□□□ 1.18
CTSA-204ENST00000372484 ERBB3P21860 1342 aa22.41■■□□□ 1.18
CTSA-204ENST00000372484 MEIS3Q99687 375 aa22.4■■□□□ 1.18
CTSA-204ENST00000372484 TEFQ10587 303 aa22.4■■□□□ 1.18
CTSA-204ENST00000372484 ANKRD44Q8N8A2 993 aa22.4■■□□□ 1.18
CTSA-204ENST00000372484 ATP10DQ9P241 1426 aa22.4■■□□□ 1.18
CTSA-204ENST00000372484 FKBP5Q13451 457 aaPredicted RBP22.39■■□□□ 1.18
CTSA-204ENST00000372484 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.18
CTSA-204ENST00000372484 RPAP2Q8IXW5 612 aaPredicted RBP22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms