RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 PKD1L3Q7Z443 1732 aa17.05■□□□□ 0.32
SNCG-202ENST00000372017 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
SNCG-202ENST00000372017 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
SNCG-202ENST00000372017 TRIM37O94972 964 aa17.04■□□□□ 0.32
SNCG-202ENST00000372017 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
SNCG-202ENST00000372017 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
SNCG-202ENST00000372017 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
SNCG-202ENST00000372017 BCL9O00512 1426 aa17.03■□□□□ 0.32
SNCG-202ENST00000372017 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
SNCG-202ENST00000372017 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
SNCG-202ENST00000372017 KCNQ2O43526 872 aa17■□□□□ 0.31
SNCG-202ENST00000372017 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
SNCG-202ENST00000372017 KDRP35968 1356 aa17■□□□□ 0.31
SNCG-202ENST00000372017 CYP27B1O15528 508 aa16.99■□□□□ 0.31
SNCG-202ENST00000372017 ACSBG1Q96GR2 724 aa16.99■□□□□ 0.31
SNCG-202ENST00000372017 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
SNCG-202ENST00000372017 DOT1LQ8TEK3 1739 aa16.99■□□□□ 0.31
SNCG-202ENST00000372017 HMOX1P09601 288 aa16.98■□□□□ 0.31
SNCG-202ENST00000372017 BAG6P46379 1132 aa16.98■□□□□ 0.31
SNCG-202ENST00000372017 TOGARAM1Q9Y4F4 1720 aa16.98■□□□□ 0.31
SNCG-202ENST00000372017 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
SNCG-202ENST00000372017 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
SNCG-202ENST00000372017 LRP5O75197 1615 aa16.96■□□□□ 0.31
SNCG-202ENST00000372017 RALBP1Q15311 655 aa16.96■□□□□ 0.31
SNCG-202ENST00000372017 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
SNCG-202ENST00000372017 APBA3O96018 575 aa16.95■□□□□ 0.3
SNCG-202ENST00000372017 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
SNCG-202ENST00000372017 BTAF1O14981 1849 aa16.95■□□□□ 0.3
SNCG-202ENST00000372017 PCDH11XQ9BZA7 1347 aa16.95■□□□□ 0.3
SNCG-202ENST00000372017 PCDH11YQ9BZA8 1340 aa16.95■□□□□ 0.3
SNCG-202ENST00000372017 KAT6BQ8WYB5 2073 aa16.94■□□□□ 0.3
SNCG-202ENST00000372017 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
SNCG-202ENST00000372017 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
SNCG-202ENST00000372017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNCG-202ENST00000372017 PHKG2P15735 406 aa16.93■□□□□ 0.3
SNCG-202ENST00000372017 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
SNCG-202ENST00000372017 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
SNCG-202ENST00000372017 RREB1Q92766 1687 aa16.93■□□□□ 0.3
SNCG-202ENST00000372017 ITGB4P16144 1822 aa16.93■□□□□ 0.3
SNCG-202ENST00000372017 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
SNCG-202ENST00000372017 NKX1-1Q15270 411 aaPredicted RBP16.92■□□□□ 0.3
SNCG-202ENST00000372017 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
SNCG-202ENST00000372017 PLEKHG2Q9H7P9 1386 aa16.91■□□□□ 0.3
SNCG-202ENST00000372017 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
SNCG-202ENST00000372017 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
SNCG-202ENST00000372017 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
SNCG-202ENST00000372017 PROM2Q8N271 834 aa16.9■□□□□ 0.3
SNCG-202ENST00000372017 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
SNCG-202ENST00000372017 NUP188Q5SRE5 1749 aa16.9■□□□□ 0.3
SNCG-202ENST00000372017 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.3
SNCG-202ENST00000372017 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.3
SNCG-202ENST00000372017 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
SNCG-202ENST00000372017 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
SNCG-202ENST00000372017 PLSCR1O15162 318 aa16.88■□□□□ 0.29
SNCG-202ENST00000372017 MTHFSDQ2M296 383 aaKnown RBP16.88■□□□□ 0.29
SNCG-202ENST00000372017 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
SNCG-202ENST00000372017 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
SNCG-202ENST00000372017 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
SNCG-202ENST00000372017 U2AF1L5P0DN76 240 aaPredicted RBP16.87■□□□□ 0.29
SNCG-202ENST00000372017 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNCG-202ENST00000372017 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
SNCG-202ENST00000372017 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
SNCG-202ENST00000372017 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
SNCG-202ENST00000372017 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
SNCG-202ENST00000372017 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
SNCG-202ENST00000372017 SCN11AQ9UI33 1791 aa16.86■□□□□ 0.29
SNCG-202ENST00000372017 LY75O60449 1722 aa16.85■□□□□ 0.29
SNCG-202ENST00000372017 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
SNCG-202ENST00000372017 PIGBQ92521 554 aa16.84■□□□□ 0.29
SNCG-202ENST00000372017 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
SNCG-202ENST00000372017 FCHSD2O94868 740 aa16.83■□□□□ 0.28
SNCG-202ENST00000372017 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
SNCG-202ENST00000372017 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
SNCG-202ENST00000372017 LGR6Q9HBX8 967 aa16.83■□□□□ 0.28
SNCG-202ENST00000372017 PLEKHF1Q96S99 279 aa16.82■□□□□ 0.28
SNCG-202ENST00000372017 LRRC4BQ9NT99 713 aa16.82■□□□□ 0.28
SNCG-202ENST00000372017 KCNQ4P56696 695 aa16.81■□□□□ 0.28
SNCG-202ENST00000372017 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
SNCG-202ENST00000372017 DCAF5Q96JK2 942 aa16.81■□□□□ 0.28
SNCG-202ENST00000372017 PAPPAQ13219 1627 aa16.8■□□□□ 0.28
SNCG-202ENST00000372017 DLG5Q8TDM6 1919 aa16.79■□□□□ 0.28
SNCG-202ENST00000372017 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
SNCG-202ENST00000372017 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
SNCG-202ENST00000372017 HSP90AB1P08238 724 aaKnown RBP16.79■□□□□ 0.28
SNCG-202ENST00000372017 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
SNCG-202ENST00000372017 IL17REQ8NFR9 667 aa16.78■□□□□ 0.28
SNCG-202ENST00000372017 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
SNCG-202ENST00000372017 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
SNCG-202ENST00000372017 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
SNCG-202ENST00000372017 ANP32CO43423 234 aa16.77■□□□□ 0.28
SNCG-202ENST00000372017 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.28
SNCG-202ENST00000372017 GAS2L2Q8NHY3 880 aa16.77■□□□□ 0.28
SNCG-202ENST00000372017 MRC1P22897 1456 aa16.77■□□□□ 0.28
SNCG-202ENST00000372017 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.27
SNCG-202ENST00000372017 PALLDQ8WX93 1383 aa16.77■□□□□ 0.27
SNCG-202ENST00000372017 MAP3K5Q99683 1374 aa16.77■□□□□ 0.27
SNCG-202ENST00000372017 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
SNCG-202ENST00000372017 CABP4P57796 275 aa16.76■□□□□ 0.27
SNCG-202ENST00000372017 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
SNCG-202ENST00000372017 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms