RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 ARXQ96QS3 562 aa25.86■■□□□ 1.73
NDUFA1-201ENST00000371437 ST20-MTHFSA0A0A6YYL1 179 aa25.85■■□□□ 1.73
NDUFA1-201ENST00000371437 HOXC9P31274 260 aa25.85■■□□□ 1.73
NDUFA1-201ENST00000371437 DDX54Q8TDD1 881 aaKnown RBP25.85■■□□□ 1.73
NDUFA1-201ENST00000371437 ANKRD36BQ8N2N9 1353 aa25.84■■□□□ 1.73
NDUFA1-201ENST00000371437 ZNF784Q8NCA9 323 aaPredicted RBP25.83■■□□□ 1.73
NDUFA1-201ENST00000371437 TAF1LQ8IZX4 1826 aa25.83■■□□□ 1.73
NDUFA1-201ENST00000371437 PNPLA7Q6ZV29 1317 aa25.83■■□□□ 1.73
NDUFA1-201ENST00000371437 SLC27A3Q5K4L6 730 aa25.82■■□□□ 1.72
NDUFA1-201ENST00000371437 COG3Q96JB2 828 aa25.82■■□□□ 1.72
NDUFA1-201ENST00000371437 RTL1A6NKG5 1358 aa25.81■■□□□ 1.72
NDUFA1-201ENST00000371437 C5P01031 1676 aa25.8■■□□□ 1.72
NDUFA1-201ENST00000371437 KCNQ4P56696 695 aa25.8■■□□□ 1.72
NDUFA1-201ENST00000371437 TOGARAM1Q9Y4F4 1720 aa25.79■■□□□ 1.72
NDUFA1-201ENST00000371437 ITGB4P16144 1822 aa25.79■■□□□ 1.72
NDUFA1-201ENST00000371437 PRIM1P49642 420 aaKnown RBP25.78■■□□□ 1.72
NDUFA1-201ENST00000371437 AMPHP49418 695 aa25.77■■□□□ 1.72
NDUFA1-201ENST00000371437 SLC16A10Q8TF71 515 aa25.77■■□□□ 1.72
NDUFA1-201ENST00000371437 PKD1L3Q7Z443 1732 aa25.75■■□□□ 1.71
NDUFA1-201ENST00000371437 RRS1Q15050 365 aaKnown RBP25.75■■□□□ 1.71
NDUFA1-201ENST00000371437 ZCRB1Q8TBF4 217 aaKnown RBP25.75■■□□□ 1.71
NDUFA1-201ENST00000371437 SYTL4Q96C24 671 aaPredicted RBP25.75■■□□□ 1.71
NDUFA1-201ENST00000371437 NBPF6Q5VWK0 638 aa25.74■■□□□ 1.71
NDUFA1-201ENST00000371437 NBPF4Q96M43 638 aa25.74■■□□□ 1.71
NDUFA1-201ENST00000371437 ANKRD26Q9UPS8 1709 aa25.74■■□□□ 1.71
NDUFA1-201ENST00000371437 FYB1O15117 783 aa25.73■■□□□ 1.71
NDUFA1-201ENST00000371437 GGNBP2Q9H3C7 697 aa25.72■■□□□ 1.71
NDUFA1-201ENST00000371437 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
NDUFA1-201ENST00000371437 TFCP2L1Q9NZI6 479 aa25.7■■□□□ 1.7
NDUFA1-201ENST00000371437 USP47Q96K76 1375 aa25.69■■□□□ 1.7
NDUFA1-201ENST00000371437 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
NDUFA1-201ENST00000371437 CCNL1Q9UK58 526 aaPredicted RBP25.68■■□□□ 1.7
NDUFA1-201ENST00000371437 INSRP06213 1382 aa25.68■■□□□ 1.7
NDUFA1-201ENST00000371437 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
NDUFA1-201ENST00000371437 POLD1P28340 1107 aa25.67■■□□□ 1.7
NDUFA1-201ENST00000371437 UBR3Q6ZT12 1888 aa25.67■■□□□ 1.7
NDUFA1-201ENST00000371437 SMG6Q86US8 1419 aaKnown RBP25.67■■□□□ 1.7
NDUFA1-201ENST00000371437 NLGN2Q8NFZ4 835 aa25.67■■□□□ 1.7
NDUFA1-201ENST00000371437 CGNL1Q0VF96 1302 aa25.66■■□□□ 1.7
NDUFA1-201ENST00000371437 KLHL34Q8N239 644 aa25.66■■□□□ 1.7
NDUFA1-201ENST00000371437 GPR162Q16538 588 aa25.65■■□□□ 1.7
NDUFA1-201ENST00000371437 HSP90AB2PQ58FF8 381 aa25.65■■□□□ 1.7
NDUFA1-201ENST00000371437 C4BP0C0L5 1744 aa25.65■■□□□ 1.7
NDUFA1-201ENST00000371437 TMF1P82094 1093 aa25.64■■□□□ 1.7
NDUFA1-201ENST00000371437 COL23A1Q86Y22 540 aaPredicted RBP25.64■■□□□ 1.7
NDUFA1-201ENST00000371437 FLT4P35916 1363 aa25.64■■□□□ 1.69
NDUFA1-201ENST00000371437 NCAPD2Q15021 1401 aa25.63■■□□□ 1.69
NDUFA1-201ENST00000371437 KIF24Q5T7B8 1368 aa25.63■■□□□ 1.69
NDUFA1-201ENST00000371437 RAPGEF4Q8WZA2 1011 aa25.62■■□□□ 1.69
NDUFA1-201ENST00000371437 TATP17735 454 aaPredicted RBP25.61■■□□□ 1.69
NDUFA1-201ENST00000371437 PCDH11XQ9BZA7 1347 aa25.61■■□□□ 1.69
NDUFA1-201ENST00000371437 PCDH11YQ9BZA8 1340 aa25.61■■□□□ 1.69
NDUFA1-201ENST00000371437 GOLGB1Q14789 3259 aaKnown RBP25.6■■□□□ 1.69
NDUFA1-201ENST00000371437 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
NDUFA1-201ENST00000371437 PALLDQ8WX93 1383 aa25.58■■□□□ 1.69
NDUFA1-201ENST00000371437 CYP27B1O15528 508 aa25.58■■□□□ 1.69
NDUFA1-201ENST00000371437 C1QTNF8P60827 252 aa25.58■■□□□ 1.69
NDUFA1-201ENST00000371437 NSD3Q9BZ95 1437 aa25.57■■□□□ 1.68
NDUFA1-201ENST00000371437 YBX3P16989 372 aaKnown RBP eCLIP25.57■■□□□ 1.68
NDUFA1-201ENST00000371437 MSL1Q68DK7 614 aa25.56■■□□□ 1.68
NDUFA1-201ENST00000371437 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
NDUFA1-201ENST00000371437 EMILIN1Q9Y6C2 1016 aa25.56■■□□□ 1.68
NDUFA1-201ENST00000371437 MSH5O43196 834 aa25.54■■□□□ 1.68
NDUFA1-201ENST00000371437 AMIGO3Q86WK7 504 aa25.53■■□□□ 1.68
NDUFA1-201ENST00000371437 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
NDUFA1-201ENST00000371437 SENP3-EIF4A1A0A087X0R7 540 aa25.51■■□□□ 1.67
NDUFA1-201ENST00000371437 CDCA8Q53HL2 280 aa25.5■■□□□ 1.67
NDUFA1-201ENST00000371437 NKX1-1Q15270 411 aaPredicted RBP25.48■■□□□ 1.67
NDUFA1-201ENST00000371437 PIGBQ92521 554 aa25.47■■□□□ 1.67
NDUFA1-201ENST00000371437 SMIM5Q71RC9 77 aa25.46■■□□□ 1.67
NDUFA1-201ENST00000371437 FLAD1Q8NFF5 587 aa25.46■■□□□ 1.67
NDUFA1-201ENST00000371437 KIF13BQ9NQT8 1826 aa25.46■■□□□ 1.67
NDUFA1-201ENST00000371437 KIAA1551Q9HCM1 1747 aa25.46■■□□□ 1.67
NDUFA1-201ENST00000371437 WASHC2AQ641Q2 1341 aa25.45■■□□□ 1.66
NDUFA1-201ENST00000371437 GRIN3BO60391 1043 aa25.45■■□□□ 1.66
NDUFA1-201ENST00000371437 GIGYF1O75420 1035 aaPredicted RBP25.45■■□□□ 1.66
NDUFA1-201ENST00000371437 SMARCC1Q92922 1105 aaPredicted RBP25.45■■□□□ 1.66
NDUFA1-201ENST00000371437 EYA1Q99502 592 aa25.44■■□□□ 1.66
NDUFA1-201ENST00000371437 CD2APQ9Y5K6 639 aa25.44■■□□□ 1.66
NDUFA1-201ENST00000371437 COL5A3P25940 1745 aaPredicted RBP25.43■■□□□ 1.66
NDUFA1-201ENST00000371437 ZNF831Q5JPB2 1677 aa25.43■■□□□ 1.66
NDUFA1-201ENST00000371437 AK7Q96M32 723 aa25.42■■□□□ 1.66
NDUFA1-201ENST00000371437 ATP10DQ9P241 1426 aa25.41■■□□□ 1.66
NDUFA1-201ENST00000371437 LINC00116Q8NCU8 138 aa25.41■■□□□ 1.66
NDUFA1-201ENST00000371437 ADCY9O60503 1353 aa25.41■■□□□ 1.66
NDUFA1-201ENST00000371437 PPM1GO15355 546 aaPredicted RBP25.4■■□□□ 1.66
NDUFA1-201ENST00000371437 HMGB2P26583 209 aaKnown RBP25.4■■□□□ 1.66
NDUFA1-201ENST00000371437 POLKQ9UBT6 870 aa25.4■■□□□ 1.66
NDUFA1-201ENST00000371437 SPG7Q9UQ90 795 aa25.4■■□□□ 1.66
NDUFA1-201ENST00000371437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.39■■□□□ 1.66
NDUFA1-201ENST00000371437 LOC102724428A0A0B4J2F2 783 aa25.39■■□□□ 1.66
NDUFA1-201ENST00000371437 PHF14O94880 888 aa25.39■■□□□ 1.66
NDUFA1-201ENST00000371437 SIK1P57059 783 aa25.39■■□□□ 1.66
NDUFA1-201ENST00000371437 ITPK1Q13572 414 aa25.38■■□□□ 1.65
NDUFA1-201ENST00000371437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.65
NDUFA1-201ENST00000371437 N4BP2Q86UW6 1770 aaPredicted RBP25.38■■□□□ 1.65
NDUFA1-201ENST00000371437 CICQ96RK0 1608 aaPredicted RBP25.37■■□□□ 1.65
NDUFA1-201ENST00000371437 PHKG2P15735 406 aa25.37■■□□□ 1.65
NDUFA1-201ENST00000371437 ASAP1Q9ULH1 1129 aa25.37■■□□□ 1.65
NDUFA1-201ENST00000371437 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms