RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 INCENPQ9NQS7 918 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
RPRD2-202ENST00000369068 GSDMDP57764 484 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 KRT222Q8N1A0 295 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
RPRD2-202ENST00000369068 CFTRP13569 1480 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 CTAGE5O15320 804 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 MCM3P25205 808 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 PANK2Q9BZ23 570 aa12.57□□□□□ -0.4
RPRD2-202ENST00000369068 KDM4AO75164 1064 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 CWC27Q6UX04 472 aaKnown RBP12.56□□□□□ -0.4
RPRD2-202ENST00000369068 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
RPRD2-202ENST00000369068 HS1BP3Q53T59 392 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 CCDC43Q96MW1 224 aaKnown RBP12.56□□□□□ -0.4
RPRD2-202ENST00000369068 DDX19AQ9NUU7 478 aaKnown RBP12.56□□□□□ -0.4
RPRD2-202ENST00000369068 ZKSCAN5Q9Y2L8 839 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
RPRD2-202ENST00000369068 RAD21O60216 631 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 KIF5CO60282 957 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 CAVIN2O95810 425 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 CDKL5O76039 1030 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 CCDC83Q8IWF9 413 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 CCAR1Q8IX12 1150 aaKnown RBP12.55□□□□□ -0.4
RPRD2-202ENST00000369068 GTPBP4Q9BZE4 634 aaKnown RBP12.55□□□□□ -0.4
RPRD2-202ENST00000369068 KIF4BQ2VIQ3 1234 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
RPRD2-202ENST00000369068 NOLC1Q14978 699 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPRD2-202ENST00000369068 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 TRMT1Q9NXH9 659 aaKnown RBP12.54□□□□□ -0.4
RPRD2-202ENST00000369068 FCHSD2O94868 740 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 MAP4K4O95819 1239 aaPredicted RBP12.54□□□□□ -0.4
RPRD2-202ENST00000369068 NEFHP12036 1026 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 CASQ1P31415 396 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
RPRD2-202ENST00000369068 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 SRGAP3O43295 1099 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
RPRD2-202ENST00000369068 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
RPRD2-202ENST00000369068 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
RPRD2-202ENST00000369068 MX1P20591 662 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 BBXQ8WY36 941 aaPredicted RBP12.53□□□□□ -0.4
RPRD2-202ENST00000369068 CTNNA3Q9UI47 895 aa12.53□□□□□ -0.4
RPRD2-202ENST00000369068 IMMTQ16891 758 aaKnown RBP12.52□□□□□ -0.4
RPRD2-202ENST00000369068 ZNF165P49910 485 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 UBE2HP62256 183 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 MICALCLQ6ZW33 695 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 GOLGA6L9A6NEM1 432 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 CEP135Q66GS9 1140 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
RPRD2-202ENST00000369068 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.41
RPRD2-202ENST00000369068 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 GLRX3O76003 335 aaKnown RBP12.52□□□□□ -0.41
RPRD2-202ENST00000369068 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
RPRD2-202ENST00000369068 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 SYCP1Q15431 976 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 AACSQ86V21 672 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 CCDC94Q9BW85 323 aaPredicted RBP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 ANKRD30BQ9BXX2 1392 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 TIAM1Q13009 1591 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.416e-8■■■□□ 16.9
RPRD2-202ENST00000369068 LMAN1P49257 510 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 SEPT7Q16181 437 aaKnown RBP12.51□□□□□ -0.41
RPRD2-202ENST00000369068 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
RPRD2-202ENST00000369068 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
RPRD2-202ENST00000369068 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 NCOA1Q15788 1441 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 TAF4BQ92750 862 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 IGHDP01880 384 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 NLRP6P59044 892 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 NFE2L2Q16236 605 aa12.5□□□□□ -0.41
RPRD2-202ENST00000369068 GPRASP1Q5JY77 1395 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms