RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 CFAP53Q96M91 514 aa20.58■□□□□ 0.89
RTN4IP1-201ENST00000369063 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.89
RTN4IP1-201ENST00000369063 KDRP35968 1356 aa20.58■□□□□ 0.88
RTN4IP1-201ENST00000369063 SF3B2Q13435 895 aaKnown RBP20.58■□□□□ 0.88
RTN4IP1-201ENST00000369063 SULT6B1Q6IMI4 303 aa20.58■□□□□ 0.88
RTN4IP1-201ENST00000369063 AEBP1Q8IUX7 1158 aa20.58■□□□□ 0.88
RTN4IP1-201ENST00000369063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.58■□□□□ 0.88
RTN4IP1-201ENST00000369063 RGPD1P0DJD0 1748 aa20.57■□□□□ 0.88
RTN4IP1-201ENST00000369063 PLEKHG2Q9H7P9 1386 aa20.56■□□□□ 0.88
RTN4IP1-201ENST00000369063 SPG7Q9UQ90 795 aa20.55■□□□□ 0.88
RTN4IP1-201ENST00000369063 PCDH11XQ9BZA7 1347 aa20.55■□□□□ 0.88
RTN4IP1-201ENST00000369063 PCDH11YQ9BZA8 1340 aa20.55■□□□□ 0.88
RTN4IP1-201ENST00000369063 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
RTN4IP1-201ENST00000369063 CYP27B1O15528 508 aa20.53■□□□□ 0.88
RTN4IP1-201ENST00000369063 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
RTN4IP1-201ENST00000369063 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
RTN4IP1-201ENST00000369063 HMOX1P09601 288 aa20.52■□□□□ 0.88
RTN4IP1-201ENST00000369063 DEFB132Q7Z7B7 95 aa20.52■□□□□ 0.88
RTN4IP1-201ENST00000369063 U2SURPO15042 1029 aaKnown RBP20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 BAG6P46379 1132 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 SBF2Q86WG5 1849 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 APBA3O96018 575 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 AMOTQ4VCS5 1084 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 NUDCQ9Y266 331 aa20.51■□□□□ 0.87
RTN4IP1-201ENST00000369063 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
RTN4IP1-201ENST00000369063 KCNQ2O43526 872 aa20.5■□□□□ 0.87
RTN4IP1-201ENST00000369063 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
RTN4IP1-201ENST00000369063 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
RTN4IP1-201ENST00000369063 TNS1Q9HBL0 1735 aaKnown RBP20.49■□□□□ 0.87
RTN4IP1-201ENST00000369063 EN1Q05925 392 aaPredicted RBP20.48■□□□□ 0.87
RTN4IP1-201ENST00000369063 NKX1-1Q15270 411 aaPredicted RBP20.48■□□□□ 0.87
RTN4IP1-201ENST00000369063 IFNL2Q8IZJ0 200 aa20.48■□□□□ 0.87
RTN4IP1-201ENST00000369063 PHKG2P15735 406 aa20.47■□□□□ 0.87
RTN4IP1-201ENST00000369063 DIEXFQ68CQ4 756 aaKnown RBP20.46■□□□□ 0.87
RTN4IP1-201ENST00000369063 PLSCR1O15162 318 aa20.45■□□□□ 0.86
RTN4IP1-201ENST00000369063 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
RTN4IP1-201ENST00000369063 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.86
RTN4IP1-201ENST00000369063 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
RTN4IP1-201ENST00000369063 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
RTN4IP1-201ENST00000369063 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
RTN4IP1-201ENST00000369063 NHSQ6T4R5 1651 aa20.44■□□□□ 0.86
RTN4IP1-201ENST00000369063 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
RTN4IP1-201ENST00000369063 FCHSD2O94868 740 aa20.43■□□□□ 0.86
RTN4IP1-201ENST00000369063 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
RTN4IP1-201ENST00000369063 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
RTN4IP1-201ENST00000369063 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
RTN4IP1-201ENST00000369063 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
RTN4IP1-201ENST00000369063 PRKAR2BP31323 418 aa20.41■□□□□ 0.86
RTN4IP1-201ENST00000369063 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
RTN4IP1-201ENST00000369063 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
RTN4IP1-201ENST00000369063 DCAF5Q96JK2 942 aa20.41■□□□□ 0.86
RTN4IP1-201ENST00000369063 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
RTN4IP1-201ENST00000369063 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.86
RTN4IP1-201ENST00000369063 ANP32CO43423 234 aa20.38■□□□□ 0.85
RTN4IP1-201ENST00000369063 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
RTN4IP1-201ENST00000369063 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
RTN4IP1-201ENST00000369063 PROM2Q8N271 834 aa20.38■□□□□ 0.85
RTN4IP1-201ENST00000369063 BTAF1O14981 1849 aa20.37■□□□□ 0.85
RTN4IP1-201ENST00000369063 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
RTN4IP1-201ENST00000369063 TOGARAM1Q9Y4F4 1720 aa20.36■□□□□ 0.85
RTN4IP1-201ENST00000369063 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
RTN4IP1-201ENST00000369063 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
RTN4IP1-201ENST00000369063 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
RTN4IP1-201ENST00000369063 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
RTN4IP1-201ENST00000369063 PIGBQ92521 554 aa20.35■□□□□ 0.85
RTN4IP1-201ENST00000369063 TXNRD1Q16881 649 aa20.35■□□□□ 0.85
RTN4IP1-201ENST00000369063 TMOD3Q9NYL9 352 aa20.35■□□□□ 0.85
RTN4IP1-201ENST00000369063 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
RTN4IP1-201ENST00000369063 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
RTN4IP1-201ENST00000369063 ITGB4P16144 1822 aa20.33■□□□□ 0.84
RTN4IP1-201ENST00000369063 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
RTN4IP1-201ENST00000369063 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
RTN4IP1-201ENST00000369063 CABP4P57796 275 aa20.31■□□□□ 0.84
RTN4IP1-201ENST00000369063 RREB1Q92766 1687 aa20.31■□□□□ 0.84
RTN4IP1-201ENST00000369063 NEFMP07197 916 aa20.3■□□□□ 0.84
RTN4IP1-201ENST00000369063 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
RTN4IP1-201ENST00000369063 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 MAP3K5Q99683 1374 aa20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 SMARCC1Q92922 1105 aaPredicted RBP20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 ADAMTS8Q9UP79 889 aa20.29■□□□□ 0.84
RTN4IP1-201ENST00000369063 PALLDQ8WX93 1383 aa20.28■□□□□ 0.84
RTN4IP1-201ENST00000369063 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
RTN4IP1-201ENST00000369063 SLC52A2Q9HAB3 445 aa20.28■□□□□ 0.84
RTN4IP1-201ENST00000369063 ASAP1Q9ULH1 1129 aa20.28■□□□□ 0.84
RTN4IP1-201ENST00000369063 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
RTN4IP1-201ENST00000369063 NUP188Q5SRE5 1749 aa20.27■□□□□ 0.84
RTN4IP1-201ENST00000369063 NBPF14Q5TI25 921 aa20.27■□□□□ 0.84
RTN4IP1-201ENST00000369063 ATG3Q9NT62 314 aa20.27■□□□□ 0.84
RTN4IP1-201ENST00000369063 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
RTN4IP1-201ENST00000369063 CCNL1Q9UK58 526 aaPredicted RBP20.26■□□□□ 0.83
RTN4IP1-201ENST00000369063 LY75O60449 1722 aa20.25■□□□□ 0.83
RTN4IP1-201ENST00000369063 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
RTN4IP1-201ENST00000369063 KCNQ4P56696 695 aa20.25■□□□□ 0.83
RTN4IP1-201ENST00000369063 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms