RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NHSQ6T4R5 1651 aa30.44■■■□□ 2.46
ECHDC1-203ENST00000368291 TATP17735 454 aaPredicted RBP30.44■■■□□ 2.46
ECHDC1-203ENST00000368291 BAG6P46379 1132 aa30.44■■■□□ 2.46
ECHDC1-203ENST00000368291 DDX54Q8TDD1 881 aaKnown RBP30.43■■■□□ 2.46
ECHDC1-203ENST00000368291 IL13P35225 146 aa30.42■■■□□ 2.46
ECHDC1-203ENST00000368291 EN1Q05925 392 aaPredicted RBP30.42■■■□□ 2.46
ECHDC1-203ENST00000368291 APBA3O96018 575 aa30.41■■■□□ 2.46
ECHDC1-203ENST00000368291 DDX10Q13206 875 aaKnown RBP30.41■■■□□ 2.46
ECHDC1-203ENST00000368291 COL3A1P02461 1466 aaPredicted RBP30.4■■■□□ 2.46
ECHDC1-203ENST00000368291 DOT1LQ8TEK3 1739 aa30.39■■■□□ 2.46
ECHDC1-203ENST00000368291 BCL11BQ9C0K0 894 aaPredicted RBP30.39■■■□□ 2.45
ECHDC1-203ENST00000368291 RGPD3A6NKT7 1758 aaPredicted RBP30.38■■■□□ 2.45
ECHDC1-203ENST00000368291 RGPD4Q7Z3J3 1758 aa30.38■■■□□ 2.45
ECHDC1-203ENST00000368291 KCNQ2O43526 872 aa30.38■■■□□ 2.45
ECHDC1-203ENST00000368291 CAMKK2Q96RR4 588 aa30.38■■■□□ 2.45
ECHDC1-203ENST00000368291 RREB1Q92766 1687 aa30.37■■■□□ 2.45
ECHDC1-203ENST00000368291 ACSBG1Q96GR2 724 aa30.37■■■□□ 2.45
ECHDC1-203ENST00000368291 BTAF1O14981 1849 aa30.36■■■□□ 2.45
ECHDC1-203ENST00000368291 EZH2Q15910 746 aaKnown RBP30.36■■■□□ 2.45
ECHDC1-203ENST00000368291 CYP27B1O15528 508 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 PPP2R1AP30153 589 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 AEBP1Q8IUX7 1158 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 PCDH11XQ9BZA7 1347 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 PCDH11YQ9BZA8 1340 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 KDRP35968 1356 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 PARD3Q8TEW0 1356 aa30.34■■■□□ 2.45
ECHDC1-203ENST00000368291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.32■■■□□ 2.443e-7■■□□□ 13.1
ECHDC1-203ENST00000368291 PLEKHG2Q9H7P9 1386 aa30.32■■■□□ 2.44
ECHDC1-203ENST00000368291 NUP188Q5SRE5 1749 aa30.31■■■□□ 2.44
ECHDC1-203ENST00000368291 DIAPH1O60610 1272 aaKnown RBP30.31■■■□□ 2.44
ECHDC1-203ENST00000368291 TOGARAM1Q9Y4F4 1720 aa30.31■■■□□ 2.44
ECHDC1-203ENST00000368291 PLSCR1O15162 318 aa30.29■■■□□ 2.44
ECHDC1-203ENST00000368291 SULT6B1Q6IMI4 303 aa30.29■■■□□ 2.44
ECHDC1-203ENST00000368291 SPG7Q9UQ90 795 aa30.29■■■□□ 2.44
ECHDC1-203ENST00000368291 ITGB4P16144 1822 aa30.29■■■□□ 2.44
ECHDC1-203ENST00000368291 PRIM1P49642 420 aaKnown RBP30.24■■■□□ 2.43
ECHDC1-203ENST00000368291 NKX1-1Q15270 411 aaPredicted RBP30.24■■■□□ 2.43
ECHDC1-203ENST00000368291 HMOX1P09601 288 aa30.23■■■□□ 2.43
ECHDC1-203ENST00000368291 PROM2Q8N271 834 aa30.23■■■□□ 2.43
ECHDC1-203ENST00000368291 PHKG2P15735 406 aa30.22■■■□□ 2.43
ECHDC1-203ENST00000368291 ZNF316A6NFI3 1004 aaPredicted RBP30.2■■■□□ 2.43
ECHDC1-203ENST00000368291 PLEKHO1Q53GL0 409 aaPredicted RBP30.2■■■□□ 2.43
ECHDC1-203ENST00000368291 IFNL2Q8IZJ0 200 aa30.2■■■□□ 2.43
ECHDC1-203ENST00000368291 SYTL4Q96C24 671 aaPredicted RBP30.2■■■□□ 2.43
ECHDC1-203ENST00000368291 CFAP53Q96M91 514 aa30.2■■■□□ 2.43
ECHDC1-203ENST00000368291 LY75O60449 1722 aa30.18■■■□□ 2.42
ECHDC1-203ENST00000368291 AMOTQ4VCS5 1084 aa30.18■■■□□ 2.42
ECHDC1-203ENST00000368291 VIRMAQ69YN4 1812 aaKnown RBP30.17■■■□□ 2.42
ECHDC1-203ENST00000368291 U2SURPO15042 1029 aaKnown RBP30.16■■■□□ 2.42
ECHDC1-203ENST00000368291 RALBP1Q15311 655 aa30.16■■■□□ 2.42
ECHDC1-203ENST00000368291 TXNRD1Q16881 649 aa30.15■■■□□ 2.42
ECHDC1-203ENST00000368291 ZNF530Q6P9A1 599 aaPredicted RBP30.15■■■□□ 2.42
ECHDC1-203ENST00000368291 SCN11AQ9UI33 1791 aa30.13■■■□□ 2.41
ECHDC1-203ENST00000368291 KDM6AO15550 1401 aaPredicted RBP30.12■■■□□ 2.41
ECHDC1-203ENST00000368291 MPRIPQ6WCQ1 1025 aa30.1■■■□□ 2.41
ECHDC1-203ENST00000368291 NUDCQ9Y266 331 aa30.1■■■□□ 2.41
ECHDC1-203ENST00000368291 PAPPAQ13219 1627 aa30.09■■■□□ 2.41
ECHDC1-203ENST00000368291 PSDA5PKW4 1024 aaPredicted RBP30.08■■■□□ 2.41
ECHDC1-203ENST00000368291 PIGBQ92521 554 aa30.08■■■□□ 2.41
ECHDC1-203ENST00000368291 RSPH6AQ9H0K4 717 aa30.08■■■□□ 2.41
ECHDC1-203ENST00000368291 HSP90AB1P08238 724 aaKnown RBP30.07■■■□□ 2.4
ECHDC1-203ENST00000368291 MTHFSDQ2M296 383 aaKnown RBP30.07■■■□□ 2.4
ECHDC1-203ENST00000368291 DCAF5Q96JK2 942 aa30.07■■■□□ 2.4
ECHDC1-203ENST00000368291 ANO8Q9HCE9 1232 aaPredicted RBP30.07■■■□□ 2.4
ECHDC1-203ENST00000368291 LRRC4BQ9NT99 713 aa30.07■■■□□ 2.4
ECHDC1-203ENST00000368291 R3HDM1Q15032 1099 aaKnown RBP30.06■■■□□ 2.4
ECHDC1-203ENST00000368291 C1orf141Q5JVX7 400 aa30.06■■■□□ 2.4
ECHDC1-203ENST00000368291 PRKRIP1Q9H875 184 aaPredicted RBP30.06■■■□□ 2.4
ECHDC1-203ENST00000368291 MYBBP1AQ9BQG0 1328 aaKnown RBP30.06■■■□□ 2.4
ECHDC1-203ENST00000368291 ADAMTS7Q9UKP4 1686 aa30.05■■■□□ 2.4
ECHDC1-203ENST00000368291 U2AF1L5P0DN76 240 aaPredicted RBP30.04■■■□□ 2.4
ECHDC1-203ENST00000368291 U2AF1Q01081 240 aaKnown RBP eCLIP30.04■■■□□ 2.4
ECHDC1-203ENST00000368291 AKAP4Q5JQC9 854 aa30.03■■■□□ 2.4
ECHDC1-203ENST00000368291 NBPF14Q5TI25 921 aa30.03■■■□□ 2.4
ECHDC1-203ENST00000368291 TAF1LQ8IZX4 1826 aa30.03■■■□□ 2.4
ECHDC1-203ENST00000368291 ERVV-2B6SEH9 535 aa30.03■■■□□ 2.4
ECHDC1-203ENST00000368291 PRKAR2BP31323 418 aa30.03■■■□□ 2.4
ECHDC1-203ENST00000368291 TMOD3Q9NYL9 352 aa30.03■■■□□ 2.4
ECHDC1-203ENST00000368291 PHACTR3Q96KR7 559 aa30.02■■■□□ 2.4
ECHDC1-203ENST00000368291 KCNQ4P56696 695 aa30.01■■■□□ 2.39
ECHDC1-203ENST00000368291 SLC27A3Q5K4L6 730 aa30.01■■■□□ 2.39
ECHDC1-203ENST00000368291 PALLDQ8WX93 1383 aa30■■■□□ 2.39
ECHDC1-203ENST00000368291 FCHSD2O94868 740 aa30■■■□□ 2.39
ECHDC1-203ENST00000368291 LGR6Q9HBX8 967 aa29.98■■■□□ 2.39
ECHDC1-203ENST00000368291 ASAP1Q9ULH1 1129 aa29.98■■■□□ 2.39
ECHDC1-203ENST00000368291 C5P01031 1676 aa29.97■■■□□ 2.39
ECHDC1-203ENST00000368291 TUBGCP6Q96RT7 1819 aa29.96■■■□□ 2.39
ECHDC1-203ENST00000368291 SMARCC1Q92922 1105 aaPredicted RBP29.96■■■□□ 2.39
ECHDC1-203ENST00000368291 CASZ1Q86V15 1759 aa29.96■■■□□ 2.39
ECHDC1-203ENST00000368291 MRC1P22897 1456 aa29.95■■■□□ 2.39
ECHDC1-203ENST00000368291 RNMTO43148 476 aaKnown RBP29.95■■■□□ 2.39
ECHDC1-203ENST00000368291 GAS2L2Q8NHY3 880 aa29.95■■■□□ 2.39
ECHDC1-203ENST00000368291 ATG3Q9NT62 314 aa29.95■■■□□ 2.39
ECHDC1-203ENST00000368291 CCNL1Q9UK58 526 aaPredicted RBP29.95■■■□□ 2.39
ECHDC1-203ENST00000368291 CABP4P57796 275 aa29.94■■■□□ 2.38
ECHDC1-203ENST00000368291 SLC15A2Q16348 729 aa29.94■■■□□ 2.38
ECHDC1-203ENST00000368291 DLG5Q8TDM6 1919 aa29.93■■■□□ 2.38
ECHDC1-203ENST00000368291 ZNF827Q17R98 1081 aa29.93■■■□□ 2.38
ECHDC1-203ENST00000368291 QSER1Q2KHR3 1735 aa29.93■■■□□ 2.38
ECHDC1-203ENST00000368291 NFATC2IPQ8NCF5 419 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms