RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 SHANK3Q9BYB0 1731 aa28.59■■■□□ 2.17
PARP1-202ENST00000366792 NPC1L1Q9UHC9 1359 aa28.59■■■□□ 2.17
PARP1-202ENST00000366792 ACSBG1Q96GR2 724 aa28.58■■■□□ 2.17
PARP1-202ENST00000366792 PARD3Q8TEW0 1356 aa28.58■■■□□ 2.17
PARP1-202ENST00000366792 NCAPD2Q15021 1401 aa28.58■■■□□ 2.17
PARP1-202ENST00000366792 NHSQ6T4R5 1651 aa28.58■■■□□ 2.16
PARP1-202ENST00000366792 KCNQ2O43526 872 aa28.55■■■□□ 2.16
PARP1-202ENST00000366792 KAT6BQ8WYB5 2073 aa28.54■■■□□ 2.16
PARP1-202ENST00000366792 MTHFSP49914 203 aa28.53■■■□□ 2.16
PARP1-202ENST00000366792 RREB1Q92766 1687 aa28.53■■■□□ 2.16
PARP1-202ENST00000366792 PCDH11XQ9BZA7 1347 aa28.51■■■□□ 2.15
PARP1-202ENST00000366792 PCDH11YQ9BZA8 1340 aa28.51■■■□□ 2.15
PARP1-202ENST00000366792 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.15
PARP1-202ENST00000366792 RGPD3A6NKT7 1758 aaPredicted RBP28.51■■■□□ 2.15
PARP1-202ENST00000366792 RGPD4Q7Z3J3 1758 aa28.51■■■□□ 2.15
PARP1-202ENST00000366792 IGSF1Q8N6C5 1336 aa28.5■■■□□ 2.15
PARP1-202ENST00000366792 PKD1L3Q7Z443 1732 aa28.5■■■□□ 2.15
PARP1-202ENST00000366792 PLSCR1O15162 318 aa28.5■■■□□ 2.15
PARP1-202ENST00000366792 DOT1LQ8TEK3 1739 aa28.49■■■□□ 2.15
PARP1-202ENST00000366792 NUP188Q5SRE5 1749 aa28.49■■■□□ 2.15
PARP1-202ENST00000366792 SYTL4Q96C24 671 aaPredicted RBP28.47■■■□□ 2.15
PARP1-202ENST00000366792 SPG7Q9UQ90 795 aa28.47■■■□□ 2.15
PARP1-202ENST00000366792 BTAF1O14981 1849 aa28.47■■■□□ 2.15
PARP1-202ENST00000366792 PSDA5PKW4 1024 aaPredicted RBP28.45■■■□□ 2.14
PARP1-202ENST00000366792 IL13P35225 146 aa28.45■■■□□ 2.14
PARP1-202ENST00000366792 PRIM1P49642 420 aaKnown RBP28.44■■■□□ 2.14
PARP1-202ENST00000366792 CYP27B1O15528 508 aa28.43■■■□□ 2.14
PARP1-202ENST00000366792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.42■■■□□ 2.14
PARP1-202ENST00000366792 R3HDM1Q15032 1099 aaKnown RBP28.41■■■□□ 2.14
PARP1-202ENST00000366792 NBPF14Q5TI25 921 aa28.41■■■□□ 2.14
PARP1-202ENST00000366792 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
PARP1-202ENST00000366792 TXNRD1Q16881 649 aa28.4■■■□□ 2.14
PARP1-202ENST00000366792 SULT6B1Q6IMI4 303 aa28.4■■■□□ 2.14
PARP1-202ENST00000366792 DIAPH1O60610 1272 aaKnown RBP28.39■■■□□ 2.14
PARP1-202ENST00000366792 PLEKHG2Q9H7P9 1386 aa28.38■■■□□ 2.13
PARP1-202ENST00000366792 PROM2Q8N271 834 aa28.38■■■□□ 2.13
PARP1-202ENST00000366792 TOGARAM1Q9Y4F4 1720 aa28.35■■■□□ 2.13
PARP1-202ENST00000366792 PLEKHO1Q53GL0 409 aaPredicted RBP28.35■■■□□ 2.13
PARP1-202ENST00000366792 IFNL2Q8IZJ0 200 aa28.35■■■□□ 2.13
PARP1-202ENST00000366792 KDRP35968 1356 aa28.35■■■□□ 2.13
PARP1-202ENST00000366792 COL3A1P02461 1466 aaPredicted RBP28.34■■■□□ 2.13
PARP1-202ENST00000366792 PHKG2P15735 406 aa28.34■■■□□ 2.13
PARP1-202ENST00000366792 DDX10Q13206 875 aaKnown RBP28.34■■■□□ 2.13
PARP1-202ENST00000366792 HMOX1P09601 288 aa28.33■■■□□ 2.13
PARP1-202ENST00000366792 PPP2R1AP30153 589 aa28.33■■■□□ 2.13
PARP1-202ENST00000366792 NKX1-1Q15270 411 aaPredicted RBP28.33■■■□□ 2.13
PARP1-202ENST00000366792 CFAP53Q96M91 514 aa28.33■■■□□ 2.13
PARP1-202ENST00000366792 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
PARP1-202ENST00000366792 ZNF530Q6P9A1 599 aaPredicted RBP28.31■■■□□ 2.12
PARP1-202ENST00000366792 MPRIPQ6WCQ1 1025 aa28.31■■■□□ 2.12
PARP1-202ENST00000366792 ANO8Q9HCE9 1232 aaPredicted RBP28.31■■■□□ 2.12
PARP1-202ENST00000366792 ITGB4P16144 1822 aa28.3■■■□□ 2.12
PARP1-202ENST00000366792 U2SURPO15042 1029 aaKnown RBP28.3■■■□□ 2.12
PARP1-202ENST00000366792 LY75O60449 1722 aa28.26■■■□□ 2.12
PARP1-202ENST00000366792 C1orf141Q5JVX7 400 aa28.26■■■□□ 2.11
PARP1-202ENST00000366792 STK32BQ9NY57 414 aa28.26■■■□□ 2.11
PARP1-202ENST00000366792 HSP90AB1P08238 724 aaKnown RBP28.25■■■□□ 2.11
PARP1-202ENST00000366792 SLC27A3Q5K4L6 730 aa28.25■■■□□ 2.11
PARP1-202ENST00000366792 LRRC4BQ9NT99 713 aa28.25■■■□□ 2.11
PARP1-202ENST00000366792 TMOD3Q9NYL9 352 aa28.24■■■□□ 2.11
PARP1-202ENST00000366792 PAPPAQ13219 1627 aa28.23■■■□□ 2.11
PARP1-202ENST00000366792 KCNQ4P56696 695 aa28.23■■■□□ 2.11
PARP1-202ENST00000366792 PIGBQ92521 554 aa28.23■■■□□ 2.11
PARP1-202ENST00000366792 DCAF5Q96JK2 942 aa28.23■■■□□ 2.11
PARP1-202ENST00000366792 CCNL1Q9UK58 526 aaPredicted RBP28.22■■■□□ 2.11
PARP1-202ENST00000366792 NUDCQ9Y266 331 aa28.22■■■□□ 2.11
PARP1-202ENST00000366792 PALLDQ8WX93 1383 aa28.22■■■□□ 2.11
PARP1-202ENST00000366792 SLC15A2Q16348 729 aa28.21■■■□□ 2.11
PARP1-202ENST00000366792 KDM6AO15550 1401 aaPredicted RBP28.2■■■□□ 2.11
PARP1-202ENST00000366792 SMARCC1Q92922 1105 aaPredicted RBP28.19■■■□□ 2.1
PARP1-202ENST00000366792 LRP5O75197 1615 aa28.18■■■□□ 2.1
PARP1-202ENST00000366792 ERVV-2B6SEH9 535 aa28.17■■■□□ 2.1
PARP1-202ENST00000366792 RALBP1Q15311 655 aa28.16■■■□□ 2.1
PARP1-202ENST00000366792 ZNF827Q17R98 1081 aa28.16■■■□□ 2.1
PARP1-202ENST00000366792 AKAP4Q5JQC9 854 aa28.16■■■□□ 2.1
PARP1-202ENST00000366792 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
PARP1-202ENST00000366792 CABP4P57796 275 aa28.15■■■□□ 2.1
PARP1-202ENST00000366792 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
PARP1-202ENST00000366792 MTHFSDQ2M296 383 aaKnown RBP28.15■■■□□ 2.1
PARP1-202ENST00000366792 ASAP1Q9ULH1 1129 aa28.14■■■□□ 2.1
PARP1-202ENST00000366792 CASZ1Q86V15 1759 aa28.14■■■□□ 2.09
PARP1-202ENST00000366792 SRCAPQ6ZRS2 3230 aa28.13■■■□□ 2.09
PARP1-202ENST00000366792 SCN11AQ9UI33 1791 aa28.12■■■□□ 2.09
PARP1-202ENST00000366792 PRKAR2BP31323 418 aa28.12■■■□□ 2.09
PARP1-202ENST00000366792 AKT1S1Q96B36 256 aa28.12■■■□□ 2.09
PARP1-202ENST00000366792 PDGFDQ9GZP0 370 aaPredicted RBP28.12■■■□□ 2.09
PARP1-202ENST00000366792 C5P01031 1676 aa28.12■■■□□ 2.09
PARP1-202ENST00000366792 RSPH6AQ9H0K4 717 aa28.11■■■□□ 2.09
PARP1-202ENST00000366792 ATG3Q9NT62 314 aa28.1■■■□□ 2.09
PARP1-202ENST00000366792 TFCP2L1Q9NZI6 479 aa28.09■■■□□ 2.09
PARP1-202ENST00000366792 LOC102724428A0A0B4J2F2 783 aa28.08■■■□□ 2.09
PARP1-202ENST00000366792 SIK1P57059 783 aa28.08■■■□□ 2.09
PARP1-202ENST00000366792 GAS2L2Q8NHY3 880 aa28.08■■■□□ 2.09
PARP1-202ENST00000366792 SPON1Q9HCB6 807 aa28.08■■■□□ 2.09
PARP1-202ENST00000366792 VIRMAQ69YN4 1812 aaKnown RBP28.08■■■□□ 2.09
PARP1-202ENST00000366792 TAF1LQ8IZX4 1826 aa28.08■■■□□ 2.09
PARP1-202ENST00000366792 ZBTB7AO95365 584 aa28.07■■■□□ 2.08
PARP1-202ENST00000366792 HMGB2P26583 209 aaKnown RBP28.07■■■□□ 2.08
PARP1-202ENST00000366792 NFATC2IPQ8NCF5 419 aa28.07■■■□□ 2.08
PARP1-202ENST00000366792 LGR6Q9HBX8 967 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms