RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
CHAMP1-201ENST00000361283 LAS1LQ9Y4W2 734 aaKnown RBP14.7□□□□□ -0.06
CHAMP1-201ENST00000361283 IPO8O15397 1037 aaKnown RBP14.7□□□□□ -0.06
CHAMP1-201ENST00000361283 RTF1Q92541 710 aaKnown RBP14.7□□□□□ -0.06
CHAMP1-201ENST00000361283 ARHGAP45Q92619 1136 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 SOS2Q07890 1332 aaPredicted RBP14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 DCTN1Q14203 1278 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 NBPF6Q5VWK0 638 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 NBPF4Q96M43 638 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 RGPD5Q99666 1765 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 GNAT3A8MTJ3 354 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 ATF7IPQ6VMQ6 1270 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 PANK1Q8TE04 598 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 BCL2L13Q9BXK5 485 aa14.69□□□□□ -0.06
CHAMP1-201ENST00000361283 DZIP1LQ8IYY4 767 aaKnown RBP14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 MCM10Q7L590 875 aa14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 OVOS2A0A0G2JMS6 1433 aa14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 TWISTNBQ3B726 338 aaPredicted RBP14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 LMOD2Q6P5Q4 547 aa14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 CLUAP1Q96AJ1 413 aa14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 LTV1Q96GA3 475 aaPredicted RBP14.68□□□□□ -0.06
CHAMP1-201ENST00000361283 MVPQ14764 893 aaKnown RBP14.67□□□□□ -0.06
CHAMP1-201ENST00000361283 RLBP1P12271 317 aa14.67□□□□□ -0.06
CHAMP1-201ENST00000361283 ANKRD24Q8TF21 1146 aa14.67□□□□□ -0.06
CHAMP1-201ENST00000361283 ABCA3Q99758 1704 aa14.67□□□□□ -0.06
CHAMP1-201ENST00000361283 MRPL50Q8N5N7 158 aaKnown RBP14.67□□□□□ -0.06
CHAMP1-201ENST00000361283 COG6Q9Y2V7 657 aa14.67□□□□□ -0.06
CHAMP1-201ENST00000361283 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 TRIM27P14373 513 aa14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 CEMIPQ8WUJ3 1361 aa14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 ADAMTS7Q9UKP4 1686 aa14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 TSPYL6Q8N831 410 aa14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 NOB1Q9ULX3 412 aaKnown RBP14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 ERBB3P21860 1342 aa14.66□□□□□ -0.06
CHAMP1-201ENST00000361283 AMOTQ4VCS5 1084 aa14.65□□□□□ -0.06
CHAMP1-201ENST00000361283 C8orf58Q8NAV2 365 aa14.65□□□□□ -0.06
CHAMP1-201ENST00000361283 DDX17Q92841 729 aaKnown RBP14.65□□□□□ -0.06
CHAMP1-201ENST00000361283 FTSJ3Q8IY81 847 aaKnown RBP14.65□□□□□ -0.06
CHAMP1-201ENST00000361283 AXIN2Q9Y2T1 843 aa14.64□□□□□ -0.07
CHAMP1-201ENST00000361283 DDX19BQ9UMR2 479 aa14.63□□□□□ -0.07
CHAMP1-201ENST00000361283 TCERG1O14776 1098 aaKnown RBP14.63□□□□□ -0.07
CHAMP1-201ENST00000361283 PLEKHO1Q53GL0 409 aaPredicted RBP14.63□□□□□ -0.07
CHAMP1-201ENST00000361283 USHBP1Q8N6Y0 703 aa14.63□□□□□ -0.07
CHAMP1-201ENST00000361283 TNNQ9UQP3 1299 aa14.63□□□□□ -0.07
CHAMP1-201ENST00000361283 KDM3BQ7LBC6 1761 aa14.63□□□□□ -0.07
CHAMP1-201ENST00000361283 AKAP4Q5JQC9 854 aa14.62□□□□□ -0.07
CHAMP1-201ENST00000361283 LRRC59Q96AG4 307 aaKnown RBP14.62□□□□□ -0.07
CHAMP1-201ENST00000361283 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
CHAMP1-201ENST00000361283 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
CHAMP1-201ENST00000361283 ZBTB7CA1YPR0 619 aa14.61□□□□□ -0.07
CHAMP1-201ENST00000361283 LTBP4Q8N2S1 1624 aa14.61□□□□□ -0.07
CHAMP1-201ENST00000361283 TSPYL4Q9UJ04 414 aa14.61□□□□□ -0.07
CHAMP1-201ENST00000361283 ABCC4O15439 1325 aa14.61□□□□□ -0.07
CHAMP1-201ENST00000361283 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 PKD1L3Q7Z443 1732 aa14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 API5Q9BZZ5 524 aaKnown RBP14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
CHAMP1-201ENST00000361283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.59□□□□□ -0.077e-7■■■□□ 14.8
CHAMP1-201ENST00000361283 CACNA1FO60840 1977 aa14.59□□□□□ -0.07
CHAMP1-201ENST00000361283 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.07
CHAMP1-201ENST00000361283 PTPRCP08575 1304 aa14.58□□□□□ -0.07
CHAMP1-201ENST00000361283 RBM19Q9Y4C8 960 aaKnown RBP14.58□□□□□ -0.08
CHAMP1-201ENST00000361283 COL22A1Q8NFW1 1626 aaPredicted RBP14.58□□□□□ -0.08
CHAMP1-201ENST00000361283 ELL2O00472 640 aaPredicted RBP14.57□□□□□ -0.08
CHAMP1-201ENST00000361283 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
CHAMP1-201ENST00000361283 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
CHAMP1-201ENST00000361283 ZBTB40Q9NUA8 1239 aa14.57□□□□□ -0.08
CHAMP1-201ENST00000361283 RGS12O14924 1447 aa14.57□□□□□ -0.08
CHAMP1-201ENST00000361283 PARP4Q9UKK3 1724 aaKnown RBP14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 IGHDP01880 384 aa14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 CABLES1Q8TDN4 633 aa14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 C1orf141Q5JVX7 400 aa14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 SCN11AQ9UI33 1791 aa14.56□□□□□ -0.08
CHAMP1-201ENST00000361283 HOXB7P09629 217 aa14.55□□□□□ -0.08
CHAMP1-201ENST00000361283 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
CHAMP1-201ENST00000361283 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
CHAMP1-201ENST00000361283 KRT24Q2M2I5 525 aa14.55□□□□□ -0.08
CHAMP1-201ENST00000361283 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
CHAMP1-201ENST00000361283 MEGF6O75095 1541 aa14.54□□□□□ -0.08
CHAMP1-201ENST00000361283 COL5A2P05997 1499 aaPredicted RBP14.54□□□□□ -0.08
CHAMP1-201ENST00000361283 RNMTO43148 476 aaKnown RBP14.54□□□□□ -0.08
CHAMP1-201ENST00000361283 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
CHAMP1-201ENST00000361283 MIS18AQ9NYP9 233 aa14.54□□□□□ -0.08
CHAMP1-201ENST00000361283 MRC1P22897 1456 aa14.54□□□□□ -0.08
CHAMP1-201ENST00000361283 INTS3Q68E01 1043 aaKnown RBP14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 ZBTB7BO15156 539 aaPredicted RBP14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 TATP17735 454 aaPredicted RBP14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 NLRP2Q9NX02 1062 aa14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 WDR17Q8IZU2 1322 aa14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 SPG7Q9UQ90 795 aa14.53□□□□□ -0.08
CHAMP1-201ENST00000361283 CCDC30Q5VVM6 783 aa14.52□□□□□ -0.08
CHAMP1-201ENST00000361283 LGR6Q9HBX8 967 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms