RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
CDC42BPB-201ENST00000361246 EXOC5O00471 708 aa24.04■■□□□ 1.44
CDC42BPB-201ENST00000361246 CA8P35219 290 aa24.04■■□□□ 1.44
CDC42BPB-201ENST00000361246 KRT28Q7Z3Y7 464 aa24.04■■□□□ 1.44
CDC42BPB-201ENST00000361246 CCDC96Q2M329 555 aa24.03■■□□□ 1.44
CDC42BPB-201ENST00000361246 CCDC173Q0VFZ6 552 aa24.03■■□□□ 1.44
CDC42BPB-201ENST00000361246 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
CDC42BPB-201ENST00000361246 EXOC6BQ9Y2D4 811 aa24.03■■□□□ 1.44
CDC42BPB-201ENST00000361246 NSD3Q9BZ95 1437 aa24.03■■□□□ 1.44
CDC42BPB-201ENST00000361246 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
CDC42BPB-201ENST00000361246 SSR1P43307 286 aaKnown RBP24.02■■□□□ 1.44
CDC42BPB-201ENST00000361246 FAM177A1Q8N128 213 aaPredicted RBP24.02■■□□□ 1.44
CDC42BPB-201ENST00000361246 ZNF396Q96N95 335 aaPredicted RBP24.02■■□□□ 1.44
CDC42BPB-201ENST00000361246 FILIP1LQ4L180 1135 aa24.02■■□□□ 1.44
CDC42BPB-201ENST00000361246 FAM13BQ9NYF5 915 aa24.02■■□□□ 1.44
CDC42BPB-201ENST00000361246 BOLA2Q9H3K6 86 aa24.02■■□□□ 1.43
CDC42BPB-201ENST00000361246 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
CDC42BPB-201ENST00000361246 ANKRD62A6NC57 917 aa24.01■■□□□ 1.43
CDC42BPB-201ENST00000361246 CLEC11AQ9Y240 323 aa24.01■■□□□ 1.43
CDC42BPB-201ENST00000361246 DUSP27Q5VZP5 1158 aa24.01■■□□□ 1.43
CDC42BPB-201ENST00000361246 WDR70Q9NW82 654 aa24.01■■□□□ 1.43
CDC42BPB-201ENST00000361246 SERPINC1P01008 464 aa24■■□□□ 1.43
CDC42BPB-201ENST00000361246 KCNH5Q8NCM2 988 aa24■■□□□ 1.43
CDC42BPB-201ENST00000361246 DEF6Q9H4E7 631 aa24■■□□□ 1.43
CDC42BPB-201ENST00000361246 F6X3S4 739 aa24■■□□□ 1.43
CDC42BPB-201ENST00000361246 NEFHP12036 1026 aa24■■□□□ 1.43
CDC42BPB-201ENST00000361246 TMEM87AQ8NBN3 555 aa24■■□□□ 1.43
CDC42BPB-201ENST00000361246 PLCD3Q8N3E9 789 aa23.99■■□□□ 1.43
CDC42BPB-201ENST00000361246 NEBLO76041 1014 aa23.99■■□□□ 1.43
CDC42BPB-201ENST00000361246 RFC4P35249 363 aa23.99■■□□□ 1.43
CDC42BPB-201ENST00000361246 CCDC97Q96F63 343 aaPredicted RBP23.99■■□□□ 1.43
CDC42BPB-201ENST00000361246 HECW1Q76N89 1606 aa23.98■■□□□ 1.43
CDC42BPB-201ENST00000361246 F8W031 263 aaPredicted RBP23.98■■□□□ 1.43
CDC42BPB-201ENST00000361246 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
CDC42BPB-201ENST00000361246 RANBP6O60518 1105 aaKnown RBP23.98■■□□□ 1.43
CDC42BPB-201ENST00000361246 CCDC8Q9H0W5 538 aaPredicted RBP23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 STAC3Q96MF2 364 aa23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 FBLN1P23142 703 aa23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 UBA5Q9GZZ9 404 aa23.97■■□□□ 1.43
CDC42BPB-201ENST00000361246 TTC16Q8NEE8 873 aa23.96■■□□□ 1.43
CDC42BPB-201ENST00000361246 BRD4O60885 1362 aaPredicted RBP23.96■■□□□ 1.43
CDC42BPB-201ENST00000361246 EPRSP07814 1512 aaKnown RBP23.96■■□□□ 1.43
CDC42BPB-201ENST00000361246 CCDC61Q9Y6R9 512 aa23.96■■□□□ 1.43
CDC42BPB-201ENST00000361246 VAT1LQ9HCJ6 419 aa23.96■■□□□ 1.43
CDC42BPB-201ENST00000361246 PDRG1Q9NUG6 133 aa23.96■■□□□ 1.43
CDC42BPB-201ENST00000361246 LARP6Q9BRS8 491 aaKnown RBP23.95■■□□□ 1.43
CDC42BPB-201ENST00000361246 CCDC144CPQ8IYA2 1237 aa23.95■■□□□ 1.43
CDC42BPB-201ENST00000361246 SEC63Q9UGP8 760 aaKnown RBP23.95■■□□□ 1.43
CDC42BPB-201ENST00000361246 GUCY1B3Q02153 619 aa23.95■■□□□ 1.42
CDC42BPB-201ENST00000361246 EMILIN1Q9Y6C2 1016 aa23.95■■□□□ 1.42
CDC42BPB-201ENST00000361246 SMARCE1Q969G3 411 aa23.95■■□□□ 1.42
CDC42BPB-201ENST00000361246 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.42
CDC42BPB-201ENST00000361246 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
CDC42BPB-201ENST00000361246 SUPT6HQ7KZ85 1726 aaKnown RBP23.94■■□□□ 1.42
CDC42BPB-201ENST00000361246 LARP1BQ659C4 914 aaKnown RBP23.94■■□□□ 1.42
CDC42BPB-201ENST00000361246 GCC1Q96CN9 775 aa23.94■■□□□ 1.42
CDC42BPB-201ENST00000361246 PIP4K2AP48426 406 aaPredicted RBP23.94■■□□□ 1.42
CDC42BPB-201ENST00000361246 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 NOM1Q5C9Z4 860 aaKnown RBP23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 NOL7Q9UMY1 257 aaKnown RBP23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 AKNAQ7Z591 1439 aa23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 KIAA1107Q9UPP5 1409 aa23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 CASTP20810 708 aaKnown RBP23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 IFIT5Q13325 482 aaKnown RBP23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 PPFIA3O75145 1194 aa23.93■■□□□ 1.42
CDC42BPB-201ENST00000361246 BLOC1S2Q6QNY1 142 aa23.92■■□□□ 1.42
CDC42BPB-201ENST00000361246 WDHD1O75717 1129 aaPredicted RBP23.92■■□□□ 1.42
CDC42BPB-201ENST00000361246 IFIT1P09914 478 aaKnown RBP23.92■■□□□ 1.42
CDC42BPB-201ENST00000361246 ATF7IPQ6VMQ6 1270 aa23.92■■□□□ 1.42
CDC42BPB-201ENST00000361246 IMMTQ16891 758 aaKnown RBP23.92■■□□□ 1.42
CDC42BPB-201ENST00000361246 TAF7Q15545 349 aaPredicted RBP23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 HSP90AA2PQ14568 343 aaPredicted RBP23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 TMEM57Q8N5G2 664 aa23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 FEZ1Q99689 392 aa23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 EHBP1L1Q8N3D4 1523 aa23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 RDXP35241 583 aaKnown RBP23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 ZNF444Q8N0Y2 327 aaPredicted RBP23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 RBM26Q5T8P6 1007 aaKnown RBP23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 CHD1LQ86WJ1 897 aa23.91■■□□□ 1.42
CDC42BPB-201ENST00000361246 STIM1Q13586 685 aa23.9■■□□□ 1.42
CDC42BPB-201ENST00000361246 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
CDC42BPB-201ENST00000361246 NASPP49321 788 aaPredicted RBP23.89■■□□□ 1.42
CDC42BPB-201ENST00000361246 TSPY26PQ9H489 355 aa23.89■■□□□ 1.42
CDC42BPB-201ENST00000361246 NAIPQ13075 1403 aa23.89■■□□□ 1.42
CDC42BPB-201ENST00000361246 NFKBIBQ15653 356 aa23.89■■□□□ 1.42
CDC42BPB-201ENST00000361246 RAB11FIP4Q86YS3 637 aa23.89■■□□□ 1.42
CDC42BPB-201ENST00000361246 TNMDQ9H2S6 317 aa23.89■■□□□ 1.41
CDC42BPB-201ENST00000361246 PLEKHH2Q8IVE3 1493 aa23.89■■□□□ 1.41
CDC42BPB-201ENST00000361246 VTI1AQ96AJ9 217 aa23.88■■□□□ 1.41
CDC42BPB-201ENST00000361246 ENOX2Q16206 610 aaKnown RBP23.88■■□□□ 1.41
CDC42BPB-201ENST00000361246 NAPBQ9H115 298 aa23.88■■□□□ 1.41
CDC42BPB-201ENST00000361246 ZNHIT6Q9NWK9 470 aaKnown RBP23.87■■□□□ 1.41
CDC42BPB-201ENST00000361246 DAPK1P53355 1430 aa23.87■■□□□ 1.41
CDC42BPB-201ENST00000361246 SLC5A1P13866 664 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms