RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 ATP7BP35670 1465 aa29.68■■■□□ 2.34
DDX42-201ENST00000359353 ATP10DQ9P241 1426 aa29.68■■■□□ 2.34
DDX42-201ENST00000359353 SLC4A10Q6U841 1118 aa29.67■■■□□ 2.34
DDX42-201ENST00000359353 RICTORQ6R327 1708 aa29.67■■■□□ 2.34
DDX42-201ENST00000359353 INTS3Q68E01 1043 aaKnown RBP29.67■■■□□ 2.34
DDX42-201ENST00000359353 F6X3S4 739 aa29.66■■■□□ 2.34
DDX42-201ENST00000359353 CDK12Q9NYV4 1490 aaPredicted RBP29.65■■■□□ 2.34
DDX42-201ENST00000359353 EDC4Q6P2E9 1401 aaKnown RBP29.65■■■□□ 2.34
DDX42-201ENST00000359353 PRPF40AO75400 957 aaKnown RBP29.64■■■□□ 2.34
DDX42-201ENST00000359353 EIF4A2Q14240 407 aaKnown RBP29.64■■■□□ 2.33
DDX42-201ENST00000359353 NOL8Q76FK4 1167 aaKnown RBP29.64■■■□□ 2.33
DDX42-201ENST00000359353 LMBRD1Q9NUN5 540 aa29.64■■■□□ 2.33
DDX42-201ENST00000359353 RGS12O14924 1447 aa29.63■■■□□ 2.33
DDX42-201ENST00000359353 CPSF1Q10570 1443 aaKnown RBP29.63■■■□□ 2.33
DDX42-201ENST00000359353 PTMSP20962 102 aa29.62■■■□□ 2.33
DDX42-201ENST00000359353 RTL1A6NKG5 1358 aa29.62■■■□□ 2.33
DDX42-201ENST00000359353 METP08581 1390 aa29.62■■■□□ 2.33
DDX42-201ENST00000359353 SLC4A2P04920 1241 aa29.62■■■□□ 2.33
DDX42-201ENST00000359353 ZSCAN23Q3MJ62 389 aa29.62■■■□□ 2.33
DDX42-201ENST00000359353 G2E3Q7L622 706 aa29.61■■■□□ 2.33
DDX42-201ENST00000359353 RIMBP3CA6NJZ7 1639 aa29.61■■■□□ 2.33
DDX42-201ENST00000359353 RIMBP3BA6NNM3 1639 aa29.61■■■□□ 2.33
DDX42-201ENST00000359353 RIMBP3Q9UFD9 1639 aa29.61■■■□□ 2.33
DDX42-201ENST00000359353 FOXO3O43524 673 aa29.6■■■□□ 2.33
DDX42-201ENST00000359353 CCDC173Q0VFZ6 552 aa29.6■■■□□ 2.33
DDX42-201ENST00000359353 HSP90AA2PQ14568 343 aaPredicted RBP29.6■■■□□ 2.33
DDX42-201ENST00000359353 ZDHHC9Q9Y397 364 aa29.6■■■□□ 2.33
DDX42-201ENST00000359353 HSP90AB2PQ58FF8 381 aa29.59■■■□□ 2.33
DDX42-201ENST00000359353 CLEC17AQ6ZS10 378 aa29.59■■■□□ 2.33
DDX42-201ENST00000359353 RBSNQ9H1K0 784 aa29.59■■■□□ 2.33
DDX42-201ENST00000359353 CYP2E1P05181 493 aaPredicted RBP29.58■■■□□ 2.33
DDX42-201ENST00000359353 NUCB2P80303 420 aa29.58■■■□□ 2.33
DDX42-201ENST00000359353 EXOC6BQ9Y2D4 811 aa29.58■■■□□ 2.33
DDX42-201ENST00000359353 RPAP2Q8IXW5 612 aaPredicted RBP29.58■■■□□ 2.33
DDX42-201ENST00000359353 NSFL1CQ9UNZ2 370 aaKnown RBP29.58■■■□□ 2.33
DDX42-201ENST00000359353 CCDC61Q9Y6R9 512 aa29.58■■■□□ 2.33
DDX42-201ENST00000359353 PRIM1P49642 420 aaKnown RBP29.58■■■□□ 2.33
DDX42-201ENST00000359353 ANP32BQ92688 251 aaKnown RBP29.58■■■□□ 2.33
DDX42-201ENST00000359353 GPT2Q8TD30 523 aa29.57■■■□□ 2.32
DDX42-201ENST00000359353 ST18O60284 1047 aa29.57■■■□□ 2.32
DDX42-201ENST00000359353 FOXD4L6Q3SYB3 417 aaPredicted RBP29.57■■■□□ 2.32
DDX42-201ENST00000359353 FOXD4L3Q6VB84 417 aaPredicted RBP29.57■■■□□ 2.32
DDX42-201ENST00000359353 CASC1Q6TDU7 716 aa29.56■■■□□ 2.32
DDX42-201ENST00000359353 PRR36Q9H6K5 1346 aa29.56■■■□□ 2.32
DDX42-201ENST00000359353 CHL1O00533 1208 aa29.56■■■□□ 2.32
DDX42-201ENST00000359353 NECTIN2Q92692 538 aa29.56■■■□□ 2.32
DDX42-201ENST00000359353 PPP1R9BQ96SB3 815 aa29.55■■■□□ 2.32
DDX42-201ENST00000359353 A2ML1A8K2U0 1454 aa29.55■■■□□ 2.32
DDX42-201ENST00000359353 AATKQ6ZMQ8 1374 aa29.55■■■□□ 2.32
DDX42-201ENST00000359353 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.54■■■□□ 2.32
DDX42-201ENST00000359353 NEK4P51957 841 aa29.53■■■□□ 2.32
DDX42-201ENST00000359353 KIAA1211Q6ZU35 1233 aa29.53■■■□□ 2.32
DDX42-201ENST00000359353 ZSCAN30Q86W11 494 aa29.52■■■□□ 2.32
DDX42-201ENST00000359353 ERC2O15083 957 aa29.51■■■□□ 2.31
DDX42-201ENST00000359353 ZNF445P59923 1031 aa29.5■■■□□ 2.31
DDX42-201ENST00000359353 SYCE3A1L190 88 aa29.5■■■□□ 2.31
DDX42-201ENST00000359353 REC8O95072 547 aa29.5■■■□□ 2.31
DDX42-201ENST00000359353 PDE1AP54750 535 aa29.5■■■□□ 2.31
DDX42-201ENST00000359353 MSNP26038 577 aaKnown RBP29.49■■■□□ 2.31
DDX42-201ENST00000359353 TPRNQ4KMQ1 711 aa29.49■■■□□ 2.31
DDX42-201ENST00000359353 TMEM63CQ9P1W3 806 aa29.49■■■□□ 2.31
DDX42-201ENST00000359353 REREQ9P2R6 1566 aa29.49■■■□□ 2.31
DDX42-201ENST00000359353 KIF24Q5T7B8 1368 aa29.49■■■□□ 2.31
DDX42-201ENST00000359353 FAM69CQ0P6D2 419 aa29.48■■■□□ 2.31
DDX42-201ENST00000359353 PALD1Q9ULE6 856 aa29.48■■■□□ 2.31
DDX42-201ENST00000359353 RNF214Q8ND24 703 aa29.48■■■□□ 2.31
DDX42-201ENST00000359353 DLC1Q96QB1 1528 aa29.47■■■□□ 2.31
DDX42-201ENST00000359353 SETD1AO15047 1707 aaKnown RBP29.47■■■□□ 2.31
DDX42-201ENST00000359353 IBTKQ9P2D0 1353 aaPredicted RBP29.46■■■□□ 2.31
DDX42-201ENST00000359353 RILPL2Q969X0 211 aa29.46■■■□□ 2.31
DDX42-201ENST00000359353 TSPYL4Q9UJ04 414 aa29.46■■■□□ 2.31
DDX42-201ENST00000359353 TMX3Q96JJ7 454 aa29.46■■■□□ 2.31
DDX42-201ENST00000359353 CWC22Q9HCG8 908 aaKnown RBP29.45■■■□□ 2.3
DDX42-201ENST00000359353 PTPRCP08575 1304 aa29.44■■■□□ 2.3
DDX42-201ENST00000359353 TRIM6-TRIM34B2RNG4 842 aa29.44■■■□□ 2.3
DDX42-201ENST00000359353 VSIG10Q8N0Z9 540 aa29.43■■■□□ 2.3
DDX42-201ENST00000359353 ZBTB7CA1YPR0 619 aa29.43■■■□□ 2.3
DDX42-201ENST00000359353 XPCQ01831 940 aaPredicted RBP29.43■■■□□ 2.3
DDX42-201ENST00000359353 UPF3BQ9BZI7 483 aaKnown RBP29.43■■■□□ 2.3
DDX42-201ENST00000359353 TTC21BQ7Z4L5 1316 aa29.43■■■□□ 2.3
DDX42-201ENST00000359353 MTHFSDQ2M296 383 aaKnown RBP29.42■■■□□ 2.3
DDX42-201ENST00000359353 PNMA6EA0A0J9YXQ4 647 aa29.42■■■□□ 2.3
DDX42-201ENST00000359353 HMMRO75330 724 aa29.42■■■□□ 2.3
DDX42-201ENST00000359353 GDPD2Q9HCC8 539 aa29.42■■■□□ 2.3
DDX42-201ENST00000359353 ANO2Q9NQ90 1003 aa29.42■■■□□ 2.3
DDX42-201ENST00000359353 ACEP12821 1306 aa29.42■■■□□ 2.3
DDX42-201ENST00000359353 RIMS1Q86UR5 1692 aaKnown RBP29.41■■■□□ 2.3
DDX42-201ENST00000359353 RRP9O43818 475 aaKnown RBP29.41■■■□□ 2.3
DDX42-201ENST00000359353 MAP3K19Q56UN5 1328 aa29.41■■■□□ 2.3
DDX42-201ENST00000359353 MON2Q7Z3U7 1717 aa29.4■■■□□ 2.3
DDX42-201ENST00000359353 TSPOAP1O95153 1857 aa29.4■■■□□ 2.3
DDX42-201ENST00000359353 UNC5CLQ8IV45 518 aa29.39■■■□□ 2.3
DDX42-201ENST00000359353 NRXN3Q9Y4C0 1643 aa29.39■■■□□ 2.3
DDX42-201ENST00000359353 RBM10P98175 930 aaKnown RBP29.39■■■□□ 2.29
DDX42-201ENST00000359353 MPNDQ8N594 471 aa29.38■■■□□ 2.29
DDX42-201ENST00000359353 R3HCC1Q9Y3T6 440 aaKnown RBP29.38■■■□□ 2.29
DDX42-201ENST00000359353 C3P01024 1663 aa29.38■■■□□ 2.29
DDX42-201ENST00000359353 CRB1P82279 1406 aa29.38■■■□□ 2.29
DDX42-201ENST00000359353 KIAA0232Q92628 1395 aa29.38■■■□□ 2.29
DDX42-201ENST00000359353 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms