RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 BACH2Q9BYV9 841 aa22.43■■□□□ 1.18
NPAS3-202ENST00000356141 ZNF428Q96B54 188 aa22.43■■□□□ 1.18
NPAS3-202ENST00000356141 ZNF335Q9H4Z2 1342 aaPredicted RBP22.41■■□□□ 1.18
NPAS3-202ENST00000356141 PDZRN3Q9UPQ7 1066 aa22.41■■□□□ 1.18
NPAS3-202ENST00000356141 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
NPAS3-202ENST00000356141 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
NPAS3-202ENST00000356141 SLC4A10Q6U841 1118 aa22.4■■□□□ 1.18
NPAS3-202ENST00000356141 IPO8O15397 1037 aaKnown RBP22.39■■□□□ 1.18
NPAS3-202ENST00000356141 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.18
NPAS3-202ENST00000356141 F6X3S4 739 aa22.39■■□□□ 1.17
NPAS3-202ENST00000356141 ANP32AP39687 249 aaKnown RBP22.39■■□□□ 1.17
NPAS3-202ENST00000356141 IL17REQ8NFR9 667 aa22.39■■□□□ 1.17
NPAS3-202ENST00000356141 IP6K1Q92551 441 aa22.39■■□□□ 1.17
NPAS3-202ENST00000356141 ARHGEF10O15013 1369 aa22.39■■□□□ 1.17
NPAS3-202ENST00000356141 SLC4A2P04920 1241 aa22.38■■□□□ 1.17
NPAS3-202ENST00000356141 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
NPAS3-202ENST00000356141 G2E3Q7L622 706 aa22.38■■□□□ 1.17
NPAS3-202ENST00000356141 CHL1O00533 1208 aa22.38■■□□□ 1.17
NPAS3-202ENST00000356141 GNAT3A8MTJ3 354 aa22.37■■□□□ 1.17
NPAS3-202ENST00000356141 ANKRD24Q8TF21 1146 aa22.37■■□□□ 1.17
NPAS3-202ENST00000356141 DDX19BQ9UMR2 479 aa22.37■■□□□ 1.17
NPAS3-202ENST00000356141 C1orf167Q5SNV9 1468 aa22.37■■□□□ 1.17
NPAS3-202ENST00000356141 APBB1O00213 710 aa22.37■■□□□ 1.17
NPAS3-202ENST00000356141 SLC4A3P48751 1232 aa22.37■■□□□ 1.17
NPAS3-202ENST00000356141 ALDH1L2Q3SY69 923 aa22.36■■□□□ 1.17
NPAS3-202ENST00000356141 GAS2L2Q8NHY3 880 aa22.35■■□□□ 1.17
NPAS3-202ENST00000356141 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
NPAS3-202ENST00000356141 KCNQ3O43525 872 aa22.35■■□□□ 1.17
NPAS3-202ENST00000356141 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
NPAS3-202ENST00000356141 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
NPAS3-202ENST00000356141 MARF1Q9Y4F3 1742 aaKnown RBP22.34■■□□□ 1.17
NPAS3-202ENST00000356141 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
NPAS3-202ENST00000356141 UBE2Q2Q8WVN8 375 aa22.34■■□□□ 1.17
NPAS3-202ENST00000356141 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
NPAS3-202ENST00000356141 ANXA1P04083 346 aa22.33■■□□□ 1.16
NPAS3-202ENST00000356141 C8orf34Q49A92 452 aa22.33■■□□□ 1.16
NPAS3-202ENST00000356141 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.16
NPAS3-202ENST00000356141 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
NPAS3-202ENST00000356141 LNPKQ9C0E8 428 aa22.32■■□□□ 1.16
NPAS3-202ENST00000356141 ZBTB40Q9NUA8 1239 aa22.32■■□□□ 1.16
NPAS3-202ENST00000356141 SEC24BO95487 1268 aa22.32■■□□□ 1.16
NPAS3-202ENST00000356141 CRB1P82279 1406 aa22.32■■□□□ 1.16
NPAS3-202ENST00000356141 STRCP1A6NGW2 1772 aa22.31■■□□□ 1.16
NPAS3-202ENST00000356141 LTN1O94822 1766 aa22.31■■□□□ 1.16
NPAS3-202ENST00000356141 KDRP35968 1356 aa22.31■■□□□ 1.16
NPAS3-202ENST00000356141 MS4A1P11836 297 aa22.3■■□□□ 1.16
NPAS3-202ENST00000356141 RGPD2P0DJD1 1756 aa22.29■■□□□ 1.16
NPAS3-202ENST00000356141 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
NPAS3-202ENST00000356141 ZBTB7BO15156 539 aaPredicted RBP22.28■■□□□ 1.16
NPAS3-202ENST00000356141 HAP1P54257 671 aaPredicted RBP22.28■■□□□ 1.16
NPAS3-202ENST00000356141 FAM161AQ3B820 660 aa22.28■■□□□ 1.16
NPAS3-202ENST00000356141 MSH6P52701 1360 aa22.27■■□□□ 1.16
NPAS3-202ENST00000356141 MAP3K5Q99683 1374 aa22.26■■□□□ 1.15
NPAS3-202ENST00000356141 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
NPAS3-202ENST00000356141 CADPS2Q86UW7 1296 aa22.26■■□□□ 1.15
NPAS3-202ENST00000356141 MST1RQ04912 1400 aa22.26■■□□□ 1.15
NPAS3-202ENST00000356141 NFAT5O94916 1531 aa22.25■■□□□ 1.15
NPAS3-202ENST00000356141 PRAMEF22A3QJZ6 481 aa22.25■■□□□ 1.15
NPAS3-202ENST00000356141 NBR1Q14596 966 aa22.25■■□□□ 1.15
NPAS3-202ENST00000356141 USP35Q9P2H5 1018 aa22.25■■□□□ 1.15
NPAS3-202ENST00000356141 ANKRD45Q5TZF3 282 aa22.25■■□□□ 1.15
NPAS3-202ENST00000356141 FKBP5Q13451 457 aaPredicted RBP22.24■■□□□ 1.15
NPAS3-202ENST00000356141 MEIS3Q99687 375 aa22.24■■□□□ 1.15
NPAS3-202ENST00000356141 BRINP3Q76B58 766 aa22.24■■□□□ 1.15
NPAS3-202ENST00000356141 IPO9Q96P70 1041 aaKnown RBP22.24■■□□□ 1.15
NPAS3-202ENST00000356141 TEFQ10587 303 aa22.23■■□□□ 1.15
NPAS3-202ENST00000356141 SIRT2Q8IXJ6 389 aa22.23■■□□□ 1.15
NPAS3-202ENST00000356141 PHAXQ9H814 394 aaKnown RBP22.23■■□□□ 1.15
NPAS3-202ENST00000356141 TAF7Q15545 349 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-202ENST00000356141 NOP58Q9Y2X3 529 aaKnown RBP22.23■■□□□ 1.15
NPAS3-202ENST00000356141 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
NPAS3-202ENST00000356141 SLC39A6Q13433 755 aa22.21■■□□□ 1.15
NPAS3-202ENST00000356141 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
NPAS3-202ENST00000356141 API5Q9BZZ5 524 aaKnown RBP22.21■■□□□ 1.15
NPAS3-202ENST00000356141 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
NPAS3-202ENST00000356141 ABCC4O15439 1325 aa22.21■■□□□ 1.15
NPAS3-202ENST00000356141 PXDNQ92626 1479 aa22.2■■□□□ 1.14
NPAS3-202ENST00000356141 BTBD11A6QL63 1104 aa22.2■■□□□ 1.14
NPAS3-202ENST00000356141 PIP4K2AP48426 406 aaPredicted RBP22.2■■□□□ 1.14
NPAS3-202ENST00000356141 HDGFL1Q5TGJ6 251 aa22.19■■□□□ 1.14
NPAS3-202ENST00000356141 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
NPAS3-202ENST00000356141 NPHP3Q7Z494 1330 aa22.19■■□□□ 1.14
NPAS3-202ENST00000356141 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
NPAS3-202ENST00000356141 KIAA0232Q92628 1395 aa22.18■■□□□ 1.14
NPAS3-202ENST00000356141 PLEKHO1Q53GL0 409 aaPredicted RBP22.18■■□□□ 1.14
NPAS3-202ENST00000356141 ERBB3P21860 1342 aa22.18■■□□□ 1.14
NPAS3-202ENST00000356141 LMTK3Q96Q04 1460 aa22.18■■□□□ 1.14
NPAS3-202ENST00000356141 USP19O94966 1318 aa22.17■■□□□ 1.14
NPAS3-202ENST00000356141 SMARCA5O60264 1052 aaPredicted RBP22.17■■□□□ 1.14
NPAS3-202ENST00000356141 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
NPAS3-202ENST00000356141 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
NPAS3-202ENST00000356141 RTL1A6NKG5 1358 aa22.16■■□□□ 1.14
NPAS3-202ENST00000356141 FLIIQ13045 1269 aa22.16■■□□□ 1.14
NPAS3-202ENST00000356141 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
NPAS3-202ENST00000356141 ARHGAP45Q92619 1136 aa22.16■■□□□ 1.14
NPAS3-202ENST00000356141 HDAC1Q13547 482 aaPredicted RBP22.15■■□□□ 1.14
NPAS3-202ENST00000356141 CHPF2Q9P2E5 772 aa22.15■■□□□ 1.14
NPAS3-202ENST00000356141 PRDM11Q9NQV5 511 aa22.15■■□□□ 1.14
NPAS3-202ENST00000356141 MED1Q15648 1581 aaPredicted RBP22.14■■□□□ 1.13
NPAS3-202ENST00000356141 DEKP35659 375 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms