RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 ANKRD24Q8TF21 1146 aa22.27■■□□□ 1.16
CKLF-203ENST00000351137 PRIM1P49642 420 aaKnown RBP22.26■■□□□ 1.15
CKLF-203ENST00000351137 MON2Q7Z3U7 1717 aa22.26■■□□□ 1.15
CKLF-203ENST00000351137 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
CKLF-203ENST00000351137 MSH5O43196 834 aa22.25■■□□□ 1.15
CKLF-203ENST00000351137 KCNQ4P56696 695 aa22.25■■□□□ 1.15
CKLF-203ENST00000351137 JMYQ8N9B5 988 aa22.25■■□□□ 1.15
CKLF-203ENST00000351137 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
CKLF-203ENST00000351137 PRELPP51888 382 aa22.24■■□□□ 1.15
CKLF-203ENST00000351137 DDX54Q8TDD1 881 aaKnown RBP22.24■■□□□ 1.15
CKLF-203ENST00000351137 WDR90Q96KV7 1748 aa22.23■■□□□ 1.15
CKLF-203ENST00000351137 SYTL4Q96C24 671 aaPredicted RBP22.22■■□□□ 1.15
CKLF-203ENST00000351137 IGSF1Q8N6C5 1336 aa22.22■■□□□ 1.15
CKLF-203ENST00000351137 USP47Q96K76 1375 aa22.22■■□□□ 1.15
CKLF-203ENST00000351137 C5P01031 1676 aa22.21■■□□□ 1.15
CKLF-203ENST00000351137 COL13A1Q5TAT6 717 aaPredicted RBP22.21■■□□□ 1.15
CKLF-203ENST00000351137 MSL1Q68DK7 614 aa22.21■■□□□ 1.15
CKLF-203ENST00000351137 KLRG1Q96E93 195 aa22.2■■□□□ 1.14
CKLF-203ENST00000351137 PCNTO95613 3336 aa22.19■■□□□ 1.14
CKLF-203ENST00000351137 TAF1LQ8IZX4 1826 aa22.19■■□□□ 1.14
CKLF-203ENST00000351137 RBM46Q8TBY0 533 aaKnown RBP22.17■■□□□ 1.14
CKLF-203ENST00000351137 IP6K1Q92551 441 aa22.16■■□□□ 1.14
CKLF-203ENST00000351137 NSD3Q9BZ95 1437 aa22.15■■□□□ 1.14
CKLF-203ENST00000351137 TNS4Q8IZW8 715 aa22.15■■□□□ 1.14
CKLF-203ENST00000351137 ZCRB1Q8TBF4 217 aaKnown RBP22.15■■□□□ 1.14
CKLF-203ENST00000351137 SBNO2Q9Y2G9 1366 aa22.14■■□□□ 1.14
CKLF-203ENST00000351137 CGNL1Q0VF96 1302 aa22.13■■□□□ 1.13
CKLF-203ENST00000351137 FSTL1Q12841 308 aa22.13■■□□□ 1.13
CKLF-203ENST00000351137 NME9Q86XW9 330 aa22.11■■□□□ 1.13
CKLF-203ENST00000351137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
CKLF-203ENST00000351137 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
CKLF-203ENST00000351137 C4BP0C0L5 1744 aa22.1■■□□□ 1.13
CKLF-203ENST00000351137 KIF13BQ9NQT8 1826 aa22.1■■□□□ 1.13
CKLF-203ENST00000351137 CD163L1Q9NR16 1453 aa22.09■■□□□ 1.13
CKLF-203ENST00000351137 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
CKLF-203ENST00000351137 CAPN15O75808 1086 aa22.08■■□□□ 1.13
CKLF-203ENST00000351137 TOGARAM1Q9Y4F4 1720 aa22.08■■□□□ 1.12
CKLF-203ENST00000351137 C10orf71Q711Q0 1435 aa22.07■■□□□ 1.12
CKLF-203ENST00000351137 PALLDQ8WX93 1383 aa22.07■■□□□ 1.12
CKLF-203ENST00000351137 MEGF6O75095 1541 aa22.06■■□□□ 1.12
CKLF-203ENST00000351137 SSFA2P28290 1259 aa22.06■■□□□ 1.12
CKLF-203ENST00000351137 PLEKHG2Q9H7P9 1386 aa22.06■■□□□ 1.12
CKLF-203ENST00000351137 TGFB2P61812 414 aa22.05■■□□□ 1.12
CKLF-203ENST00000351137 AK7Q96M32 723 aa22.05■■□□□ 1.12
CKLF-203ENST00000351137 NMRK2Q9NPI5 230 aa22.05■■□□□ 1.12
CKLF-203ENST00000351137 SMARCC1Q92922 1105 aaPredicted RBP22.04■■□□□ 1.12
CKLF-203ENST00000351137 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
CKLF-203ENST00000351137 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
CKLF-203ENST00000351137 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
CKLF-203ENST00000351137 C16orf71Q8IYS4 520 aaPredicted RBP22.03■■□□□ 1.12
CKLF-203ENST00000351137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.02■■□□□ 1.12
CKLF-203ENST00000351137 SLC34A2O95436 690 aa22.01■■□□□ 1.11
CKLF-203ENST00000351137 LTV1Q96GA3 475 aaPredicted RBP22.01■■□□□ 1.11
CKLF-203ENST00000351137 RGPD2P0DJD1 1756 aa22■■□□□ 1.11
CKLF-203ENST00000351137 HOXC9P31274 260 aa22■■□□□ 1.11
CKLF-203ENST00000351137 WWC3Q9ULE0 1092 aa22■■□□□ 1.11
CKLF-203ENST00000351137 AMIGO3Q86WK7 504 aa21.99■■□□□ 1.11
CKLF-203ENST00000351137 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
CKLF-203ENST00000351137 PCDH11XQ9BZA7 1347 aa21.98■■□□□ 1.11
CKLF-203ENST00000351137 PCDH11YQ9BZA8 1340 aa21.98■■□□□ 1.11
CKLF-203ENST00000351137 BRCA1P38398 1863 aaKnown RBP21.98■■□□□ 1.11
CKLF-203ENST00000351137 MAP2P11137 1827 aaKnown RBP21.97■■□□□ 1.11
CKLF-203ENST00000351137 HTRA3P83110 453 aa21.97■■□□□ 1.11
CKLF-203ENST00000351137 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
CKLF-203ENST00000351137 MAP3K19Q56UN5 1328 aa21.97■■□□□ 1.11
CKLF-203ENST00000351137 KDM2BQ8NHM5 1336 aa21.97■■□□□ 1.11
CKLF-203ENST00000351137 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
CKLF-203ENST00000351137 RAPGEF4Q8WZA2 1011 aa21.96■■□□□ 1.11
CKLF-203ENST00000351137 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
CKLF-203ENST00000351137 BCS1LQ9Y276 419 aa21.96■■□□□ 1.11
CKLF-203ENST00000351137 ITGB4P16144 1822 aa21.96■■□□□ 1.11
CKLF-203ENST00000351137 ROCK2O75116 1388 aaKnown RBP21.96■■□□□ 1.11
CKLF-203ENST00000351137 TNRC6CQ9HCJ0 1690 aaKnown RBP21.95■■□□□ 1.1
CKLF-203ENST00000351137 N4BP2Q86UW6 1770 aaPredicted RBP21.95■■□□□ 1.1
CKLF-203ENST00000351137 ARHGAP27Q6ZUM4 889 aa21.95■■□□□ 1.1
CKLF-203ENST00000351137 PKD1L3Q7Z443 1732 aa21.94■■□□□ 1.1
CKLF-203ENST00000351137 PHF14O94880 888 aa21.94■■□□□ 1.1
CKLF-203ENST00000351137 AMPHP49418 695 aa21.94■■□□□ 1.1
CKLF-203ENST00000351137 A0A1W2PP64 1363 aa21.93■■□□□ 1.1
CKLF-203ENST00000351137 MMP10P09238 476 aa21.93■■□□□ 1.1
CKLF-203ENST00000351137 MPRIPQ6WCQ1 1025 aa21.93■■□□□ 1.1
CKLF-203ENST00000351137 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
CKLF-203ENST00000351137 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
CKLF-203ENST00000351137 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
CKLF-203ENST00000351137 C9orf131Q5VYM1 1079 aa21.92■■□□□ 1.1
CKLF-203ENST00000351137 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
CKLF-203ENST00000351137 HSPA1AP0DMV8 641 aaKnown RBP21.91■■□□□ 1.1
CKLF-203ENST00000351137 HSPA1BP0DMV9 641 aaKnown RBP21.91■■□□□ 1.1
CKLF-203ENST00000351137 COG3Q96JB2 828 aa21.91■■□□□ 1.1
CKLF-203ENST00000351137 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
CKLF-203ENST00000351137 NLGN1Q8N2Q7 840 aa21.9■■□□□ 1.1
CKLF-203ENST00000351137 TMC1Q8TDI8 760 aa21.9■■□□□ 1.1
CKLF-203ENST00000351137 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
CKLF-203ENST00000351137 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.1
CKLF-203ENST00000351137 ZC3H4Q9UPT8 1303 aaKnown RBP21.89■■□□□ 1.1
CKLF-203ENST00000351137 LOC102724428A0A0B4J2F2 783 aa21.89■■□□□ 1.09
CKLF-203ENST00000351137 FCHSD2O94868 740 aa21.89■■□□□ 1.09
CKLF-203ENST00000351137 SIK1P57059 783 aa21.89■■□□□ 1.09
CKLF-203ENST00000351137 A0A0G2JLW4 131 aa21.88■■□□□ 1.09
CKLF-203ENST00000351137 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms