RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RAPGEF4Q8WZA2 1011 aa30.03■■■□□ 2.4
SNX3-202ENST00000349379 ZCRB1Q8TBF4 217 aaKnown RBP30.02■■■□□ 2.4
SNX3-202ENST00000349379 DOT1LQ8TEK3 1739 aa30.02■■■□□ 2.4
SNX3-202ENST00000349379 TATP17735 454 aaPredicted RBP30.01■■■□□ 2.39
SNX3-202ENST00000349379 MTHFSP49914 203 aa30.01■■■□□ 2.39
SNX3-202ENST00000349379 BTAF1O14981 1849 aa30■■■□□ 2.39
SNX3-202ENST00000349379 PLEKHG2Q9H7P9 1386 aa30■■■□□ 2.39
SNX3-202ENST00000349379 EN1Q05925 392 aaPredicted RBP29.99■■■□□ 2.39
SNX3-202ENST00000349379 BCL11BQ9C0K0 894 aaPredicted RBP29.99■■■□□ 2.39
SNX3-202ENST00000349379 APBA3O96018 575 aa29.98■■■□□ 2.39
SNX3-202ENST00000349379 PARD3Q8TEW0 1356 aa29.98■■■□□ 2.39
SNX3-202ENST00000349379 COL3A1P02461 1466 aaPredicted RBP29.98■■■□□ 2.39
SNX3-202ENST00000349379 NUP188Q5SRE5 1749 aa29.97■■■□□ 2.39
SNX3-202ENST00000349379 IL13P35225 146 aa29.97■■■□□ 2.39
SNX3-202ENST00000349379 PTF1AQ7RTS3 328 aa29.97■■■□□ 2.39
SNX3-202ENST00000349379 CAMKK2Q96RR4 588 aa29.97■■■□□ 2.39
SNX3-202ENST00000349379 DDX54Q8TDD1 881 aaKnown RBP29.96■■■□□ 2.39
SNX3-202ENST00000349379 CNGB1Q14028 1251 aaPredicted RBP29.94■■■□□ 2.38
SNX3-202ENST00000349379 KDRP35968 1356 aa29.93■■■□□ 2.38
SNX3-202ENST00000349379 EZH2Q15910 746 aaKnown RBP29.93■■■□□ 2.38
SNX3-202ENST00000349379 TOGARAM1Q9Y4F4 1720 aa29.93■■■□□ 2.38
SNX3-202ENST00000349379 PCDH11XQ9BZA7 1347 aa29.93■■■□□ 2.38
SNX3-202ENST00000349379 PCDH11YQ9BZA8 1340 aa29.93■■■□□ 2.38
SNX3-202ENST00000349379 KCNQ2O43526 872 aa29.92■■■□□ 2.38
SNX3-202ENST00000349379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.92■■■□□ 2.38
SNX3-202ENST00000349379 PLSCR1O15162 318 aa29.91■■■□□ 2.38
SNX3-202ENST00000349379 ITGB4P16144 1822 aa29.91■■■□□ 2.38
SNX3-202ENST00000349379 ACSBG1Q96GR2 724 aa29.9■■■□□ 2.38
SNX3-202ENST00000349379 CYP27B1O15528 508 aa29.89■■■□□ 2.38
SNX3-202ENST00000349379 AEBP1Q8IUX7 1158 aa29.87■■■□□ 2.37
SNX3-202ENST00000349379 PPP2R1AP30153 589 aa29.86■■■□□ 2.37
SNX3-202ENST00000349379 DDX10Q13206 875 aaKnown RBP29.86■■■□□ 2.37
SNX3-202ENST00000349379 SPG7Q9UQ90 795 aa29.86■■■□□ 2.37
SNX3-202ENST00000349379 DIAPH1O60610 1272 aaKnown RBP29.85■■■□□ 2.37
SNX3-202ENST00000349379 SULT6B1Q6IMI4 303 aa29.84■■■□□ 2.37
SNX3-202ENST00000349379 LY75O60449 1722 aa29.84■■■□□ 2.37
SNX3-202ENST00000349379 NKX1-1Q15270 411 aaPredicted RBP29.83■■■□□ 2.37
SNX3-202ENST00000349379 PRIM1P49642 420 aaKnown RBP29.8■■■□□ 2.36
SNX3-202ENST00000349379 VIRMAQ69YN4 1812 aaKnown RBP29.8■■■□□ 2.36
SNX3-202ENST00000349379 PROM2Q8N271 834 aa29.79■■■□□ 2.36
SNX3-202ENST00000349379 PHKG2P15735 406 aa29.78■■■□□ 2.36
SNX3-202ENST00000349379 AMOTQ4VCS5 1084 aa29.77■■■□□ 2.36
SNX3-202ENST00000349379 IFNL2Q8IZJ0 200 aa29.77■■■□□ 2.36
SNX3-202ENST00000349379 PAPPAQ13219 1627 aa29.76■■■□□ 2.35
SNX3-202ENST00000349379 PLEKHO1Q53GL0 409 aaPredicted RBP29.76■■■□□ 2.35
SNX3-202ENST00000349379 CFAP53Q96M91 514 aa29.76■■■□□ 2.35
SNX3-202ENST00000349379 SCN11AQ9UI33 1791 aa29.75■■■□□ 2.35
SNX3-202ENST00000349379 TXNRD1Q16881 649 aa29.74■■■□□ 2.35
SNX3-202ENST00000349379 SYTL4Q96C24 671 aaPredicted RBP29.74■■■□□ 2.35
SNX3-202ENST00000349379 HMOX1P09601 288 aa29.73■■■□□ 2.35
SNX3-202ENST00000349379 RALBP1Q15311 655 aa29.72■■■□□ 2.35
SNX3-202ENST00000349379 ZNF530Q6P9A1 599 aaPredicted RBP29.7■■■□□ 2.35
SNX3-202ENST00000349379 KDM6AO15550 1401 aaPredicted RBP29.7■■■□□ 2.34
SNX3-202ENST00000349379 ADAMTS7Q9UKP4 1686 aa29.69■■■□□ 2.34
SNX3-202ENST00000349379 U2SURPO15042 1029 aaKnown RBP29.69■■■□□ 2.34
SNX3-202ENST00000349379 ZNF316A6NFI3 1004 aaPredicted RBP29.67■■■□□ 2.34
SNX3-202ENST00000349379 HSP90AB1P08238 724 aaKnown RBP29.67■■■□□ 2.34
SNX3-202ENST00000349379 TAF1LQ8IZX4 1826 aa29.66■■■□□ 2.34
SNX3-202ENST00000349379 NBPF14Q5TI25 921 aa29.66■■■□□ 2.34
SNX3-202ENST00000349379 PSDA5PKW4 1024 aaPredicted RBP29.65■■■□□ 2.34
SNX3-202ENST00000349379 R3HDM1Q15032 1099 aaKnown RBP29.65■■■□□ 2.34
SNX3-202ENST00000349379 MPRIPQ6WCQ1 1025 aa29.65■■■□□ 2.34
SNX3-202ENST00000349379 DCAF5Q96JK2 942 aa29.65■■■□□ 2.34
SNX3-202ENST00000349379 ANO8Q9HCE9 1232 aaPredicted RBP29.65■■■□□ 2.34
SNX3-202ENST00000349379 NUDCQ9Y266 331 aa29.65■■■□□ 2.34
SNX3-202ENST00000349379 PIGBQ92521 554 aa29.64■■■□□ 2.34
SNX3-202ENST00000349379 QSER1Q2KHR3 1735 aa29.63■■■□□ 2.33
SNX3-202ENST00000349379 CASZ1Q86V15 1759 aa29.63■■■□□ 2.33
SNX3-202ENST00000349379 SLC27A3Q5K4L6 730 aa29.63■■■□□ 2.33
SNX3-202ENST00000349379 LRRC4BQ9NT99 713 aa29.63■■■□□ 2.33
SNX3-202ENST00000349379 C1orf141Q5JVX7 400 aa29.62■■■□□ 2.33
SNX3-202ENST00000349379 RSPH6AQ9H0K4 717 aa29.62■■■□□ 2.33
SNX3-202ENST00000349379 C5P01031 1676 aa29.62■■■□□ 2.33
SNX3-202ENST00000349379 ERVV-2B6SEH9 535 aa29.61■■■□□ 2.33
SNX3-202ENST00000349379 MTHFSDQ2M296 383 aaKnown RBP29.61■■■□□ 2.33
SNX3-202ENST00000349379 AKAP4Q5JQC9 854 aa29.61■■■□□ 2.33
SNX3-202ENST00000349379 TUBGCP6Q96RT7 1819 aa29.61■■■□□ 2.33
SNX3-202ENST00000349379 TMOD3Q9NYL9 352 aa29.6■■■□□ 2.33
SNX3-202ENST00000349379 MYBBP1AQ9BQG0 1328 aaKnown RBP29.6■■■□□ 2.33
SNX3-202ENST00000349379 PALLDQ8WX93 1383 aa29.6■■■□□ 2.33
SNX3-202ENST00000349379 LRP5O75197 1615 aa29.6■■■□□ 2.33
SNX3-202ENST00000349379 MRC1P22897 1456 aa29.58■■■□□ 2.33
SNX3-202ENST00000349379 ZNF831Q5JPB2 1677 aa29.57■■■□□ 2.32
SNX3-202ENST00000349379 U2AF1L5P0DN76 240 aaPredicted RBP29.57■■■□□ 2.32
SNX3-202ENST00000349379 U2AF1Q01081 240 aaKnown RBP eCLIP29.57■■■□□ 2.32
SNX3-202ENST00000349379 SMARCC1Q92922 1105 aaPredicted RBP29.57■■■□□ 2.32
SNX3-202ENST00000349379 PRKRIP1Q9H875 184 aaPredicted RBP29.57■■■□□ 2.32
SNX3-202ENST00000349379 PRKAR2BP31323 418 aa29.56■■■□□ 2.32
SNX3-202ENST00000349379 FCHSD2O94868 740 aa29.55■■■□□ 2.32
SNX3-202ENST00000349379 SLC15A2Q16348 729 aa29.55■■■□□ 2.32
SNX3-202ENST00000349379 SIPA1L3O60292 1781 aaPredicted RBP29.54■■■□□ 2.32
SNX3-202ENST00000349379 CCNL1Q9UK58 526 aaPredicted RBP29.54■■■□□ 2.32
SNX3-202ENST00000349379 DLG5Q8TDM6 1919 aa29.53■■■□□ 2.32
SNX3-202ENST00000349379 GAS2L2Q8NHY3 880 aa29.53■■■□□ 2.32
SNX3-202ENST00000349379 PHACTR3Q96KR7 559 aa29.53■■■□□ 2.32
SNX3-202ENST00000349379 STK32BQ9NY57 414 aa29.53■■■□□ 2.32
SNX3-202ENST00000349379 KCNQ4P56696 695 aa29.52■■■□□ 2.32
SNX3-202ENST00000349379 ASAP1Q9ULH1 1129 aa29.52■■■□□ 2.32
SNX3-202ENST00000349379 CABP4P57796 275 aa29.51■■■□□ 2.31
SNX3-202ENST00000349379 ZNF827Q17R98 1081 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms