RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
SRPK1-201ENST00000346162 PZPP20742 1482 aa18.4■□□□□ 0.54
SRPK1-201ENST00000346162 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
SRPK1-201ENST00000346162 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
SRPK1-201ENST00000346162 WASHC4Q2M389 1173 aa18.39■□□□□ 0.53
SRPK1-201ENST00000346162 GNAT3A8MTJ3 354 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 TRIM29Q14134 588 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 ZKSCAN5Q9Y2L8 839 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 IGHDP01880 384 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 EXOC6BQ9Y2D4 811 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
SRPK1-201ENST00000346162 ASXL1Q8IXJ9 1541 aa18.37■□□□□ 0.53
SRPK1-201ENST00000346162 HIP1O00291 1037 aa18.37■□□□□ 0.53
SRPK1-201ENST00000346162 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
SRPK1-201ENST00000346162 POGZQ7Z3K3 1410 aa18.37■□□□□ 0.53
SRPK1-201ENST00000346162 CCDC70Q6NSX1 233 aa18.37■□□□□ 0.53
SRPK1-201ENST00000346162 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
SRPK1-201ENST00000346162 USP8P40818 1118 aa18.37■□□□□ 0.53
SRPK1-201ENST00000346162 DISP1Q96F81 1524 aa18.36■□□□□ 0.53
SRPK1-201ENST00000346162 FIBPO43427 364 aa18.36■□□□□ 0.53
SRPK1-201ENST00000346162 SSFA2P28290 1259 aa18.36■□□□□ 0.53
SRPK1-201ENST00000346162 GTF2A1P52655 376 aaPredicted RBP18.36■□□□□ 0.53
SRPK1-201ENST00000346162 ARHGEF12Q9NZN5 1544 aa18.36■□□□□ 0.53
SRPK1-201ENST00000346162 FOSBP53539 338 aa18.35■□□□□ 0.53
SRPK1-201ENST00000346162 CCDC27Q2M243 656 aa18.35■□□□□ 0.53
SRPK1-201ENST00000346162 FBXW7Q969H0 707 aa18.35■□□□□ 0.53
SRPK1-201ENST00000346162 FYB1O15117 783 aa18.35■□□□□ 0.53
SRPK1-201ENST00000346162 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
SRPK1-201ENST00000346162 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 IPO4Q8TEX9 1081 aaKnown RBP18.34■□□□□ 0.53
SRPK1-201ENST00000346162 CCDC192P0DO97 292 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 KLHL40Q2TBA0 621 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 CCDC73Q6ZRK6 1079 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 SIL1Q9H173 461 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 G3V3G9 751 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 PDCP20941 246 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 FBLN1P23142 703 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 AMOTL2Q9Y2J4 779 aa18.34■□□□□ 0.53
SRPK1-201ENST00000346162 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.53
SRPK1-201ENST00000346162 TPM1P09493 284 aa18.33■□□□□ 0.53
SRPK1-201ENST00000346162 USP25Q9UHP3 1055 aa18.33■□□□□ 0.53
SRPK1-201ENST00000346162 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.53
SRPK1-201ENST00000346162 A2MP01023 1474 aa18.33■□□□□ 0.53
SRPK1-201ENST00000346162 IL16Q14005 1332 aa18.33■□□□□ 0.52
SRPK1-201ENST00000346162 ASXL2Q76L83 1435 aa18.33■□□□□ 0.52
SRPK1-201ENST00000346162 POLR3GO15318 223 aaPredicted RBP18.33■□□□□ 0.52
SRPK1-201ENST00000346162 C8orf34Q49A92 452 aa18.33■□□□□ 0.52
SRPK1-201ENST00000346162 VPS37DQ86XT2 251 aa18.33■□□□□ 0.52
SRPK1-201ENST00000346162 TBC1D32Q96NH3 1257 aa18.33■□□□□ 0.52
SRPK1-201ENST00000346162 KRT222Q8N1A0 295 aa18.32■□□□□ 0.52
SRPK1-201ENST00000346162 TRIM34Q9BYJ4 488 aa18.32■□□□□ 0.52
SRPK1-201ENST00000346162 TMCO3Q6UWJ1 677 aa18.32■□□□□ 0.52
SRPK1-201ENST00000346162 MYL6BP14649 208 aa18.32■□□□□ 0.52
SRPK1-201ENST00000346162 UBXN4Q92575 508 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 NOL10Q9BSC4 688 aaKnown RBP18.31■□□□□ 0.52
SRPK1-201ENST00000346162 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 F6X3S4 739 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
SRPK1-201ENST00000346162 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
SRPK1-201ENST00000346162 TERF1P54274 439 aa18.3■□□□□ 0.52
SRPK1-201ENST00000346162 CABP4P57796 275 aa18.3■□□□□ 0.52
SRPK1-201ENST00000346162 NOLC1Q14978 699 aaKnown RBP eCLIP18.3■□□□□ 0.521e-5■□□□□ 10.6
SRPK1-201ENST00000346162 TAF7Q15545 349 aaPredicted RBP18.3■□□□□ 0.52
SRPK1-201ENST00000346162 C16orf45Q96MC5 204 aaPredicted RBP18.3■□□□□ 0.52
SRPK1-201ENST00000346162 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
SRPK1-201ENST00000346162 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
SRPK1-201ENST00000346162 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
SRPK1-201ENST00000346162 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
SRPK1-201ENST00000346162 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
SRPK1-201ENST00000346162 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
SRPK1-201ENST00000346162 CCP110O43303 1012 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 ERCC4Q92889 916 aaPredicted RBP18.29■□□□□ 0.52
SRPK1-201ENST00000346162 NAT10Q9H0A0 1025 aaKnown RBP18.29■□□□□ 0.52
SRPK1-201ENST00000346162 MBIPQ9NS73 344 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 PLEKHH1Q9ULM0 1364 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 TNNT1P13805 278 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 AACSQ86V21 672 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
SRPK1-201ENST00000346162 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
SRPK1-201ENST00000346162 TSR1Q2NL82 804 aaKnown RBP18.29■□□□□ 0.52
SRPK1-201ENST00000346162 ERICH2A1L162 156 aa18.28■□□□□ 0.52
SRPK1-201ENST00000346162 RUFY1Q96T51 708 aa18.28■□□□□ 0.52
SRPK1-201ENST00000346162 ADGRL2O95490 1459 aa18.28■□□□□ 0.52
SRPK1-201ENST00000346162 WDR33Q9C0J8 1336 aaKnown RBP18.28■□□□□ 0.52
SRPK1-201ENST00000346162 BAG4O95429 457 aaKnown RBP18.28■□□□□ 0.52
SRPK1-201ENST00000346162 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
SRPK1-201ENST00000346162 MARCH6O60337 910 aa18.28■□□□□ 0.52
SRPK1-201ENST00000346162 MX1P20591 662 aa18.27■□□□□ 0.52
SRPK1-201ENST00000346162 GIMAP7Q8NHV1 300 aa18.27■□□□□ 0.52
SRPK1-201ENST00000346162 PTPN14Q15678 1187 aa18.27■□□□□ 0.52
SRPK1-201ENST00000346162 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.52
SRPK1-201ENST00000346162 TOM1L2Q6ZVM7 507 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms