RNA–Protein interactions for RNA: ENST00000343619.8

ATP6V0A1-202, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP6V0A1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-202ENST00000343619 TOM1O60784 492 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TOM1L2Q6ZVM7 507 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 MBIPQ9NS73 344 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 RARSP54136 660 aaKnown RBP12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 ARXQ96QS3 562 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
ATP6V0A1-202ENST00000343619 NFAT5O94916 1531 aa12.17□□□□□ -0.46
ATP6V0A1-202ENST00000343619 ERBB3P21860 1342 aa12.17□□□□□ -0.46
ATP6V0A1-202ENST00000343619 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
ATP6V0A1-202ENST00000343619 PXDNQ92626 1479 aa12.17□□□□□ -0.46
ATP6V0A1-202ENST00000343619 KDRP35968 1356 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 LTN1O94822 1766 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 SSH1Q8WYL5 1049 aa12.16□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TEFQ10587 303 aa12.15□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
ATP6V0A1-202ENST00000343619 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
ATP6V0A1-202ENST00000343619 TRPM3Q9HCF6 1732 aaPredicted RBP12.15□□□□□ -0.46
ATP6V0A1-202ENST00000343619 C8orf58Q8NAV2 365 aa12.14□□□□□ -0.47
ATP6V0A1-202ENST00000343619 MED1Q15648 1581 aaPredicted RBP12.14□□□□□ -0.47
ATP6V0A1-202ENST00000343619 SLIT3O75094 1523 aa12.14□□□□□ -0.47
ATP6V0A1-202ENST00000343619 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
ATP6V0A1-202ENST00000343619 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
ATP6V0A1-202ENST00000343619 CT47B1P0C2W7 299 aaPredicted RBP12.12□□□□□ -0.47
ATP6V0A1-202ENST00000343619 ANP32AP39687 249 aaKnown RBP12.12□□□□□ -0.47
ATP6V0A1-202ENST00000343619 NBR1Q14596 966 aa12.12□□□□□ -0.47
ATP6V0A1-202ENST00000343619 BTG4Q9NY30 223 aa12.12□□□□□ -0.47
ATP6V0A1-202ENST00000343619 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
ATP6V0A1-202ENST00000343619 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
ATP6V0A1-202ENST00000343619 ALS2Q96Q42 1657 aa12.11□□□□□ -0.47
ATP6V0A1-202ENST00000343619 CHL1O00533 1208 aa12.11□□□□□ -0.47
ATP6V0A1-202ENST00000343619 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
ATP6V0A1-202ENST00000343619 VAMP4O75379 141 aa12.1□□□□□ -0.47
ATP6V0A1-202ENST00000343619 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
ATP6V0A1-202ENST00000343619 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
ATP6V0A1-202ENST00000343619 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
ATP6V0A1-202ENST00000343619 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
ATP6V0A1-202ENST00000343619 HTATSF1O43719 755 aaKnown RBP12.1□□□□□ -0.47
ATP6V0A1-202ENST00000343619 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
ATP6V0A1-202ENST00000343619 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
ATP6V0A1-202ENST00000343619 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
ATP6V0A1-202ENST00000343619 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
ATP6V0A1-202ENST00000343619 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
ATP6V0A1-202ENST00000343619 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 USP54Q70EL1 1684 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 CPDO75976 1380 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 RLBP1P12271 317 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 MS4A1P11836 297 aa12.08□□□□□ -0.48
ATP6V0A1-202ENST00000343619 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 TRIM27P14373 513 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 RGPD2P0DJD1 1756 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 IFNL2Q8IZJ0 200 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
ATP6V0A1-202ENST00000343619 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
ATP6V0A1-202ENST00000343619 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
ATP6V0A1-202ENST00000343619 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
ATP6V0A1-202ENST00000343619 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
ATP6V0A1-202ENST00000343619 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
ATP6V0A1-202ENST00000343619 CRB1P82279 1406 aa12.06□□□□□ -0.48
ATP6V0A1-202ENST00000343619 KCNQ3O43525 872 aa12.05□□□□□ -0.48
ATP6V0A1-202ENST00000343619 IL2RBP14784 551 aa12.05□□□□□ -0.48
ATP6V0A1-202ENST00000343619 ZCRB1Q8TBF4 217 aaKnown RBP12.05□□□□□ -0.48
ATP6V0A1-202ENST00000343619 PHRF1Q9P1Y6 1649 aaKnown RBP12.05□□□□□ -0.48
ATP6V0A1-202ENST00000343619 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
ATP6V0A1-202ENST00000343619 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 CAMTA1Q9Y6Y1 1673 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 SLC39A6Q13433 755 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 PHKG2P15735 406 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 SLC4A10Q6U841 1118 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
ATP6V0A1-202ENST00000343619 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms