RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 PANK3Q9H999 370 aa23.32■■□□□ 1.32
CD55-202ENST00000343420 TXNRD1Q16881 649 aa23.31■■□□□ 1.32
CD55-202ENST00000343420 USHBP1Q8N6Y0 703 aa23.31■■□□□ 1.32
CD55-202ENST00000343420 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
CD55-202ENST00000343420 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
CD55-202ENST00000343420 ANO8Q9HCE9 1232 aaPredicted RBP23.28■■□□□ 1.32
CD55-202ENST00000343420 WASHC2AQ641Q2 1341 aa23.28■■□□□ 1.32
CD55-202ENST00000343420 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
CD55-202ENST00000343420 POLKQ9UBT6 870 aa23.27■■□□□ 1.32
CD55-202ENST00000343420 DOT1LQ8TEK3 1739 aa23.26■■□□□ 1.31
CD55-202ENST00000343420 NSD2O96028 1365 aa23.25■■□□□ 1.31
CD55-202ENST00000343420 TNNT2P45379 298 aaPredicted RBP23.23■■□□□ 1.31
CD55-202ENST00000343420 STK32BQ9NY57 414 aa23.23■■□□□ 1.31
CD55-202ENST00000343420 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
CD55-202ENST00000343420 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
CD55-202ENST00000343420 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
CD55-202ENST00000343420 KIF7Q2M1P5 1343 aa23.21■■□□□ 1.31
CD55-202ENST00000343420 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
CD55-202ENST00000343420 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
CD55-202ENST00000343420 SLC15A2Q16348 729 aa23.2■■□□□ 1.3
CD55-202ENST00000343420 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
CD55-202ENST00000343420 SPON1Q9HCB6 807 aa23.2■■□□□ 1.3
CD55-202ENST00000343420 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
CD55-202ENST00000343420 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
CD55-202ENST00000343420 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
CD55-202ENST00000343420 EYA1Q99502 592 aa23.19■■□□□ 1.3
CD55-202ENST00000343420 SLC27A3Q5K4L6 730 aa23.17■■□□□ 1.3
CD55-202ENST00000343420 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
CD55-202ENST00000343420 EIF4A2Q14240 407 aaKnown RBP23.16■■□□□ 1.3
CD55-202ENST00000343420 LY75O60449 1722 aa23.16■■□□□ 1.3
CD55-202ENST00000343420 PDGFDQ9GZP0 370 aaPredicted RBP23.15■■□□□ 1.3
CD55-202ENST00000343420 LRRC4BQ9NT99 713 aa23.15■■□□□ 1.3
CD55-202ENST00000343420 CYP27B1O15528 508 aa23.14■■□□□ 1.29
CD55-202ENST00000343420 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
CD55-202ENST00000343420 AMER1Q5JTC6 1135 aaPredicted RBP23.12■■□□□ 1.29
CD55-202ENST00000343420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.291e-7■■■□□ 16.2
CD55-202ENST00000343420 ITGB4P16144 1822 aa23.12■■□□□ 1.29
CD55-202ENST00000343420 PPP1R1BQ9UD71 204 aaPredicted RBP23.11■■□□□ 1.29
CD55-202ENST00000343420 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
CD55-202ENST00000343420 ZBTB7AO95365 584 aa23.1■■□□□ 1.29
CD55-202ENST00000343420 IGSF1Q8N6C5 1336 aa23.09■■□□□ 1.29
CD55-202ENST00000343420 QSER1Q2KHR3 1735 aa23.09■■□□□ 1.29
CD55-202ENST00000343420 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
CD55-202ENST00000343420 ZNF827Q17R98 1081 aa23.09■■□□□ 1.29
CD55-202ENST00000343420 AKT1S1Q96B36 256 aa23.08■■□□□ 1.29
CD55-202ENST00000343420 PLEKHG2Q9H7P9 1386 aa23.08■■□□□ 1.29
CD55-202ENST00000343420 PER1O15534 1290 aaPredicted RBP23.07■■□□□ 1.28
CD55-202ENST00000343420 MPRIPQ6WCQ1 1025 aa23.07■■□□□ 1.28
CD55-202ENST00000343420 CCNL1Q9UK58 526 aaPredicted RBP23.07■■□□□ 1.28
CD55-202ENST00000343420 KCNQ4P56696 695 aa23.06■■□□□ 1.28
CD55-202ENST00000343420 MTFR1LQ9H019 292 aa23.06■■□□□ 1.28
CD55-202ENST00000343420 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
CD55-202ENST00000343420 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
CD55-202ENST00000343420 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
CD55-202ENST00000343420 PTGER2P43116 358 aa23.04■■□□□ 1.28
CD55-202ENST00000343420 PHKG2P15735 406 aa23.03■■□□□ 1.28
CD55-202ENST00000343420 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
CD55-202ENST00000343420 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
CD55-202ENST00000343420 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
CD55-202ENST00000343420 C5P01031 1676 aa23.01■■□□□ 1.27
CD55-202ENST00000343420 HMGB2P26583 209 aaKnown RBP23.01■■□□□ 1.27
CD55-202ENST00000343420 PIGBQ92521 554 aa23.01■■□□□ 1.27
CD55-202ENST00000343420 SMARCC1Q92922 1105 aaPredicted RBP23.01■■□□□ 1.27
CD55-202ENST00000343420 PNPLA7Q6ZV29 1317 aa23■■□□□ 1.27
CD55-202ENST00000343420 IL13P35225 146 aa22.99■■□□□ 1.27
CD55-202ENST00000343420 PLEKHO1Q53GL0 409 aaPredicted RBP22.99■■□□□ 1.27
CD55-202ENST00000343420 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
CD55-202ENST00000343420 SLC16A10Q8TF71 515 aa22.99■■□□□ 1.27
CD55-202ENST00000343420 SGIP1Q9BQI5 828 aa22.99■■□□□ 1.27
CD55-202ENST00000343420 NPC1L1Q9UHC9 1359 aa22.99■■□□□ 1.27
CD55-202ENST00000343420 MTHFSP49914 203 aa22.98■■□□□ 1.27
CD55-202ENST00000343420 AMOTQ4VCS5 1084 aa22.98■■□□□ 1.27
CD55-202ENST00000343420 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
CD55-202ENST00000343420 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
CD55-202ENST00000343420 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
CD55-202ENST00000343420 SULT6B1Q6IMI4 303 aa22.96■■□□□ 1.27
CD55-202ENST00000343420 KDRP35968 1356 aa22.96■■□□□ 1.27
CD55-202ENST00000343420 COL24A1Q17RW2 1714 aa22.95■■□□□ 1.26
CD55-202ENST00000343420 ZNF530Q6P9A1 599 aaPredicted RBP22.94■■□□□ 1.26
CD55-202ENST00000343420 ERVV-2B6SEH9 535 aa22.93■■□□□ 1.26
CD55-202ENST00000343420 DCAF5Q96JK2 942 aa22.93■■□□□ 1.26
CD55-202ENST00000343420 ARXQ96QS3 562 aa22.93■■□□□ 1.26
CD55-202ENST00000343420 C4BP0C0L5 1744 aa22.91■■□□□ 1.26
CD55-202ENST00000343420 ASAP1Q9ULH1 1129 aa22.91■■□□□ 1.26
CD55-202ENST00000343420 LOC102724428A0A0B4J2F2 783 aa22.9■■□□□ 1.26
CD55-202ENST00000343420 DCAF8L1A6NGE4 600 aa22.9■■□□□ 1.26
CD55-202ENST00000343420 SIK1P57059 783 aa22.9■■□□□ 1.26
CD55-202ENST00000343420 C1orf141Q5JVX7 400 aa22.9■■□□□ 1.26
CD55-202ENST00000343420 COL23A1Q86Y22 540 aaPredicted RBP22.9■■□□□ 1.26
CD55-202ENST00000343420 FHDC1Q9C0D6 1143 aaPredicted RBP22.9■■□□□ 1.26
CD55-202ENST00000343420 MSH5O43196 834 aa22.89■■□□□ 1.25
CD55-202ENST00000343420 DIAPH1O60610 1272 aaKnown RBP22.89■■□□□ 1.25
CD55-202ENST00000343420 POLD1P28340 1107 aa22.89■■□□□ 1.25
CD55-202ENST00000343420 CNGB1Q14028 1251 aaPredicted RBP22.89■■□□□ 1.25
CD55-202ENST00000343420 FLAD1Q8NFF5 587 aa22.89■■□□□ 1.25
CD55-202ENST00000343420 SYT17Q9BSW7 474 aa22.89■■□□□ 1.25
CD55-202ENST00000343420 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
CD55-202ENST00000343420 KDM6AO15550 1401 aaPredicted RBP22.89■■□□□ 1.25
CD55-202ENST00000343420 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
CD55-202ENST00000343420 AK7Q96M32 723 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms