RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 AKT1S1Q96B36 256 aa22.89■■□□□ 1.25
H3F3C-201ENST00000340398 USP47Q96K76 1375 aa22.89■■□□□ 1.25
H3F3C-201ENST00000340398 ARXQ96QS3 562 aa22.88■■□□□ 1.25
H3F3C-201ENST00000340398 FAM208AQ9UK61 1670 aaKnown RBP22.87■■□□□ 1.25
H3F3C-201ENST00000340398 MEGF6O75095 1541 aa22.87■■□□□ 1.25
H3F3C-201ENST00000340398 SLC27A3Q5K4L6 730 aa22.86■■□□□ 1.25
H3F3C-201ENST00000340398 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
H3F3C-201ENST00000340398 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
H3F3C-201ENST00000340398 NSD2O96028 1365 aa22.84■■□□□ 1.25
H3F3C-201ENST00000340398 SHANK3Q9BYB0 1731 aa22.83■■□□□ 1.25
H3F3C-201ENST00000340398 TFCP2L1Q9NZI6 479 aa22.83■■□□□ 1.25
H3F3C-201ENST00000340398 PNPLA7Q6ZV29 1317 aa22.82■■□□□ 1.24
H3F3C-201ENST00000340398 DOT1LQ8TEK3 1739 aa22.82■■□□□ 1.24
H3F3C-201ENST00000340398 RTL1A6NKG5 1358 aa22.8■■□□□ 1.24
H3F3C-201ENST00000340398 RAPGEF4Q8WZA2 1011 aa22.8■■□□□ 1.24
H3F3C-201ENST00000340398 TATP17735 454 aaPredicted RBP22.79■■□□□ 1.24
H3F3C-201ENST00000340398 SLC16A10Q8TF71 515 aa22.79■■□□□ 1.24
H3F3C-201ENST00000340398 CCNL1Q9UK58 526 aaPredicted RBP22.79■■□□□ 1.24
H3F3C-201ENST00000340398 CDCA8Q53HL2 280 aa22.78■■□□□ 1.24
H3F3C-201ENST00000340398 KLHL34Q8N239 644 aa22.78■■□□□ 1.24
H3F3C-201ENST00000340398 INSRP06213 1382 aa22.77■■□□□ 1.24
H3F3C-201ENST00000340398 EMILIN1Q9Y6C2 1016 aa22.77■■□□□ 1.24
H3F3C-201ENST00000340398 TUBGCP6Q96RT7 1819 aa22.76■■□□□ 1.23
H3F3C-201ENST00000340398 LY75O60449 1722 aa22.76■■□□□ 1.23
H3F3C-201ENST00000340398 CGNL1Q0VF96 1302 aa22.76■■□□□ 1.23
H3F3C-201ENST00000340398 ZNF784Q8NCA9 323 aaPredicted RBP22.75■■□□□ 1.23
H3F3C-201ENST00000340398 KIF20BQ96Q89 1820 aa22.75■■□□□ 1.23
H3F3C-201ENST00000340398 SMG6Q86US8 1419 aaKnown RBP22.74■■□□□ 1.23
H3F3C-201ENST00000340398 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
H3F3C-201ENST00000340398 POLD1P28340 1107 aa22.74■■□□□ 1.23
H3F3C-201ENST00000340398 COL23A1Q86Y22 540 aaPredicted RBP22.74■■□□□ 1.23
H3F3C-201ENST00000340398 QSER1Q2KHR3 1735 aa22.74■■□□□ 1.23
H3F3C-201ENST00000340398 CYP27B1O15528 508 aa22.73■■□□□ 1.23
H3F3C-201ENST00000340398 MSH5O43196 834 aa22.73■■□□□ 1.23
H3F3C-201ENST00000340398 MPRIPQ6WCQ1 1025 aa22.73■■□□□ 1.23
H3F3C-201ENST00000340398 FLT4P35916 1363 aa22.73■■□□□ 1.23
H3F3C-201ENST00000340398 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
H3F3C-201ENST00000340398 GPR162Q16538 588 aa22.72■■□□□ 1.23
H3F3C-201ENST00000340398 MAP3K5Q99683 1374 aa22.72■■□□□ 1.23
H3F3C-201ENST00000340398 GOLGB1Q14789 3259 aaKnown RBP22.71■■□□□ 1.23
H3F3C-201ENST00000340398 NLGN2Q8NFZ4 835 aa22.7■■□□□ 1.22
H3F3C-201ENST00000340398 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
H3F3C-201ENST00000340398 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
H3F3C-201ENST00000340398 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
H3F3C-201ENST00000340398 CHD4Q14839 1912 aa22.7■■□□□ 1.22
H3F3C-201ENST00000340398 KIF24Q5T7B8 1368 aa22.69■■□□□ 1.22
H3F3C-201ENST00000340398 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
H3F3C-201ENST00000340398 POLR3GLQ9BT43 218 aa22.69■■□□□ 1.22
H3F3C-201ENST00000340398 COL24A1Q17RW2 1714 aa22.68■■□□□ 1.22
H3F3C-201ENST00000340398 MSL1Q68DK7 614 aa22.68■■□□□ 1.22
H3F3C-201ENST00000340398 EYA1Q99502 592 aa22.66■■□□□ 1.22
H3F3C-201ENST00000340398 MAP2P11137 1827 aaKnown RBP22.66■■□□□ 1.22
H3F3C-201ENST00000340398 PALLDQ8WX93 1383 aa22.65■■□□□ 1.22
H3F3C-201ENST00000340398 SMIM5Q71RC9 77 aa22.65■■□□□ 1.22
H3F3C-201ENST00000340398 PIGBQ92521 554 aa22.65■■□□□ 1.22
H3F3C-201ENST00000340398 TIMELESSQ9UNS1 1208 aa22.65■■□□□ 1.22
H3F3C-201ENST00000340398 WASHC2AQ641Q2 1341 aa22.64■■□□□ 1.22
H3F3C-201ENST00000340398 POLKQ9UBT6 870 aa22.64■■□□□ 1.21
H3F3C-201ENST00000340398 ITGB4P16144 1822 aa22.64■■□□□ 1.21
H3F3C-201ENST00000340398 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
H3F3C-201ENST00000340398 AMIGO3Q86WK7 504 aa22.62■■□□□ 1.21
H3F3C-201ENST00000340398 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
H3F3C-201ENST00000340398 C5P01031 1676 aa22.62■■□□□ 1.21
H3F3C-201ENST00000340398 NKX1-1Q15270 411 aaPredicted RBP22.61■■□□□ 1.21
H3F3C-201ENST00000340398 SPG7Q9UQ90 795 aa22.61■■□□□ 1.21
H3F3C-201ENST00000340398 TAF1LQ8IZX4 1826 aa22.6■■□□□ 1.21
H3F3C-201ENST00000340398 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
H3F3C-201ENST00000340398 YBX3P16989 372 aaKnown RBP eCLIP22.59■■□□□ 1.21
H3F3C-201ENST00000340398 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
H3F3C-201ENST00000340398 PKD1L3Q7Z443 1732 aa22.58■■□□□ 1.21
H3F3C-201ENST00000340398 PHF14O94880 888 aa22.57■■□□□ 1.2
H3F3C-201ENST00000340398 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
H3F3C-201ENST00000340398 ASAP1Q9ULH1 1129 aa22.57■■□□□ 1.2
H3F3C-201ENST00000340398 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
H3F3C-201ENST00000340398 AK7Q96M32 723 aa22.56■■□□□ 1.2
H3F3C-201ENST00000340398 ANKRD26Q9UPS8 1709 aa22.55■■□□□ 1.2
H3F3C-201ENST00000340398 LOC102724428A0A0B4J2F2 783 aa22.55■■□□□ 1.2
H3F3C-201ENST00000340398 PHKG2P15735 406 aa22.55■■□□□ 1.2
H3F3C-201ENST00000340398 SIK1P57059 783 aa22.55■■□□□ 1.2
H3F3C-201ENST00000340398 LINC00116Q8NCU8 138 aa22.55■■□□□ 1.2
H3F3C-201ENST00000340398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.55■■□□□ 1.2
H3F3C-201ENST00000340398 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
H3F3C-201ENST00000340398 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
H3F3C-201ENST00000340398 PANK3Q9H999 370 aa22.54■■□□□ 1.2
H3F3C-201ENST00000340398 TMOD3Q9NYL9 352 aa22.54■■□□□ 1.2
H3F3C-201ENST00000340398 C4BP0C0L5 1744 aa22.54■■□□□ 1.2
H3F3C-201ENST00000340398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.53■■□□□ 1.2
H3F3C-201ENST00000340398 ITPK1Q13572 414 aa22.53■■□□□ 1.2
H3F3C-201ENST00000340398 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
H3F3C-201ENST00000340398 HMGB2P26583 209 aaKnown RBP22.52■■□□□ 1.2
H3F3C-201ENST00000340398 C1QTNF8P60827 252 aa22.52■■□□□ 1.2
H3F3C-201ENST00000340398 EIF4G2P78344 907 aaKnown RBP eCLIP22.52■■□□□ 1.2
H3F3C-201ENST00000340398 GRIN3BO60391 1043 aa22.51■■□□□ 1.19
H3F3C-201ENST00000340398 ATG3Q9NT62 314 aa22.51■■□□□ 1.19
H3F3C-201ENST00000340398 CD2APQ9Y5K6 639 aa22.51■■□□□ 1.19
H3F3C-201ENST00000340398 ATP6V1AP38606 617 aa22.5■■□□□ 1.19
H3F3C-201ENST00000340398 UBR3Q6ZT12 1888 aa22.49■■□□□ 1.19
H3F3C-201ENST00000340398 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
H3F3C-201ENST00000340398 GNPATO15228 680 aa22.47■■□□□ 1.19
H3F3C-201ENST00000340398 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms