RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.43■■□□□ 1.98
VRK2-201ENST00000340157 CRBNQ96SW2 442 aa27.43■■□□□ 1.98
VRK2-201ENST00000340157 BCL2L13Q9BXK5 485 aa27.42■■□□□ 1.98
VRK2-201ENST00000340157 MAP3K5Q99683 1374 aa27.4■■□□□ 1.98
VRK2-201ENST00000340157 CHL1O00533 1208 aa27.38■■□□□ 1.97
VRK2-201ENST00000340157 VIRMAQ69YN4 1812 aaKnown RBP27.38■■□□□ 1.97
VRK2-201ENST00000340157 GNAT3A8MTJ3 354 aa27.38■■□□□ 1.97
VRK2-201ENST00000340157 HTATSF1O43719 755 aaKnown RBP27.38■■□□□ 1.97
VRK2-201ENST00000340157 TSPYL6Q8N831 410 aa27.38■■□□□ 1.97
VRK2-201ENST00000340157 RTF1Q92541 710 aaKnown RBP27.37■■□□□ 1.97
VRK2-201ENST00000340157 SSH1Q8WYL5 1049 aa27.36■■□□□ 1.97
VRK2-201ENST00000340157 VAMP4O75379 141 aa27.34■■□□□ 1.97
VRK2-201ENST00000340157 C8orf58Q8NAV2 365 aa27.34■■□□□ 1.97
VRK2-201ENST00000340157 IL17REQ8NFR9 667 aa27.34■■□□□ 1.97
VRK2-201ENST00000340157 COL22A1Q8NFW1 1626 aaPredicted RBP27.34■■□□□ 1.97
VRK2-201ENST00000340157 FRAT1Q92837 279 aaPredicted RBP27.33■■□□□ 1.97
VRK2-201ENST00000340157 PRDM11Q9NQV5 511 aa27.33■■□□□ 1.97
VRK2-201ENST00000340157 PDE3AQ14432 1141 aa27.32■■□□□ 1.96
VRK2-201ENST00000340157 SMC4Q9NTJ3 1288 aa27.32■■□□□ 1.96
VRK2-201ENST00000340157 NLRP2Q9NX02 1062 aa27.32■■□□□ 1.96
VRK2-201ENST00000340157 TNNQ9UQP3 1299 aa27.32■■□□□ 1.96
VRK2-201ENST00000340157 PHLPP1O60346 1717 aa27.31■■□□□ 1.96
VRK2-201ENST00000340157 COL16A1Q07092 1604 aaPredicted RBP27.31■■□□□ 1.96
VRK2-201ENST00000340157 MEGF6O75095 1541 aa27.31■■□□□ 1.96
VRK2-201ENST00000340157 COL5A2P05997 1499 aaPredicted RBP27.3■■□□□ 1.96
VRK2-201ENST00000340157 CEMIPQ8WUJ3 1361 aa27.3■■□□□ 1.96
VRK2-201ENST00000340157 CCDC136Q96JN2 1154 aa27.3■■□□□ 1.96
VRK2-201ENST00000340157 MIS18AQ9NYP9 233 aa27.3■■□□□ 1.96
VRK2-201ENST00000340157 PLEKHO1Q53GL0 409 aaPredicted RBP27.3■■□□□ 1.96
VRK2-201ENST00000340157 PANK1Q8TE04 598 aa27.3■■□□□ 1.96
VRK2-201ENST00000340157 ELL2O00472 640 aaPredicted RBP27.29■■□□□ 1.96
VRK2-201ENST00000340157 CSB-PGBD3P0DP91 1061 aa27.29■■□□□ 1.96
VRK2-201ENST00000340157 CANXP27824 592 aaKnown RBP27.29■■□□□ 1.96
VRK2-201ENST00000340157 HAP1P54257 671 aaPredicted RBP27.29■■□□□ 1.96
VRK2-201ENST00000340157 KRT24Q2M2I5 525 aa27.29■■□□□ 1.96
VRK2-201ENST00000340157 TWISTNBQ3B726 338 aaPredicted RBP27.29■■□□□ 1.96
VRK2-201ENST00000340157 ALDH1L2Q3SY69 923 aa27.29■■□□□ 1.96
VRK2-201ENST00000340157 AMOTQ4VCS5 1084 aa27.29■■□□□ 1.96
VRK2-201ENST00000340157 ZNF428Q96B54 188 aa27.29■■□□□ 1.96
VRK2-201ENST00000340157 ZNF530Q6P9A1 599 aaPredicted RBP27.28■■□□□ 1.96
VRK2-201ENST00000340157 RLBP1P12271 317 aa27.27■■□□□ 1.96
VRK2-201ENST00000340157 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
VRK2-201ENST00000340157 PKD1L3Q7Z443 1732 aa27.26■■□□□ 1.95
VRK2-201ENST00000340157 AKAP4Q5JQC9 854 aa27.26■■□□□ 1.95
VRK2-201ENST00000340157 BRPF1P55201 1214 aaPredicted RBP27.25■■□□□ 1.95
VRK2-201ENST00000340157 LGR6Q9HBX8 967 aa27.25■■□□□ 1.95
VRK2-201ENST00000340157 TSPYL4Q9UJ04 414 aa27.25■■□□□ 1.95
VRK2-201ENST00000340157 WDR17Q8IZU2 1322 aa27.25■■□□□ 1.95
VRK2-201ENST00000340157 ZKSCAN2Q63HK3 967 aa27.23■■□□□ 1.95
VRK2-201ENST00000340157 KDM3BQ7LBC6 1761 aa27.23■■□□□ 1.95
VRK2-201ENST00000340157 RAPGEF4Q8WZA2 1011 aa27.23■■□□□ 1.95
VRK2-201ENST00000340157 NOB1Q9ULX3 412 aaKnown RBP27.23■■□□□ 1.95
VRK2-201ENST00000340157 COG6Q9Y2V7 657 aa27.23■■□□□ 1.95
VRK2-201ENST00000340157 SIPA1L3O60292 1781 aaPredicted RBP27.23■■□□□ 1.95
VRK2-201ENST00000340157 MRPL50Q8N5N7 158 aaKnown RBP27.22■■□□□ 1.95
VRK2-201ENST00000340157 TRIM27P14373 513 aa27.21■■□□□ 1.95
VRK2-201ENST00000340157 CLUAP1Q96AJ1 413 aa27.21■■□□□ 1.95
VRK2-201ENST00000340157 SCN11AQ9UI33 1791 aa27.2■■□□□ 1.95
VRK2-201ENST00000340157 PLEKHG2Q9H7P9 1386 aa27.2■■□□□ 1.95
VRK2-201ENST00000340157 PARP4Q9UKK3 1724 aaKnown RBP27.2■■□□□ 1.95
VRK2-201ENST00000340157 KIF16BQ96L93 1317 aa27.2■■□□□ 1.94
VRK2-201ENST00000340157 TOM1O60784 492 aa27.2■■□□□ 1.94
VRK2-201ENST00000340157 TAF7Q15545 349 aaPredicted RBP27.2■■□□□ 1.94
VRK2-201ENST00000340157 MPRIPQ6WCQ1 1025 aa27.2■■□□□ 1.94
VRK2-201ENST00000340157 COL14A1Q05707 1796 aaKnown RBP27.2■■□□□ 1.94
VRK2-201ENST00000340157 OVOS2A0A0G2JMS6 1433 aa27.2■■□□□ 1.94
VRK2-201ENST00000340157 TCERG1O14776 1098 aaKnown RBP27.19■■□□□ 1.94
VRK2-201ENST00000340157 TATP17735 454 aaPredicted RBP27.19■■□□□ 1.94
VRK2-201ENST00000340157 C1orf141Q5JVX7 400 aa27.19■■□□□ 1.94
VRK2-201ENST00000340157 ATF7IPQ6VMQ6 1270 aa27.19■■□□□ 1.94
VRK2-201ENST00000340157 BABAM1Q9NWV8 329 aa27.18■■□□□ 1.94
VRK2-201ENST00000340157 RNMTO43148 476 aaKnown RBP27.17■■□□□ 1.94
VRK2-201ENST00000340157 PIP4K2BP78356 416 aa27.17■■□□□ 1.94
VRK2-201ENST00000340157 DZIP1LQ8IYY4 767 aaKnown RBP27.17■■□□□ 1.94
VRK2-201ENST00000340157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.17■■□□□ 1.942e-6■■■■□ 23.5
VRK2-201ENST00000340157 TOM1L2Q6ZVM7 507 aa27.16■■□□□ 1.94
VRK2-201ENST00000340157 LARP1Q6PKG0 1096 aaKnown RBP27.15■■□□□ 1.94
VRK2-201ENST00000340157 KDM6AO15550 1401 aaPredicted RBP27.14■■□□□ 1.94
VRK2-201ENST00000340157 PELP1Q8IZL8 1130 aaKnown RBP27.14■■□□□ 1.94
VRK2-201ENST00000340157 SHANK3Q9BYB0 1731 aa27.14■■□□□ 1.93
VRK2-201ENST00000340157 CARD10Q9BWT7 1032 aa27.13■■□□□ 1.93
VRK2-201ENST00000340157 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
VRK2-201ENST00000340157 SPG7Q9UQ90 795 aa27.13■■□□□ 1.93
VRK2-201ENST00000340157 PHKG2P15735 406 aa27.13■■□□□ 1.93
VRK2-201ENST00000340157 MVPQ14764 893 aaKnown RBP27.13■■□□□ 1.93
VRK2-201ENST00000340157 UBAP1LF5GYI3 381 aa27.12■■□□□ 1.93
VRK2-201ENST00000340157 IPO8O15397 1037 aaKnown RBP27.12■■□□□ 1.93
VRK2-201ENST00000340157 FTSJ3Q8IY81 847 aaKnown RBP27.12■■□□□ 1.93
VRK2-201ENST00000340157 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
VRK2-201ENST00000340157 PLCH1Q4KWH8 1693 aa27.11■■□□□ 1.93
VRK2-201ENST00000340157 CYP27B1O15528 508 aa27.1■■□□□ 1.93
VRK2-201ENST00000340157 MS4A1P11836 297 aa27.1■■□□□ 1.93
VRK2-201ENST00000340157 ARHGAP45Q92619 1136 aa27.1■■□□□ 1.93
VRK2-201ENST00000340157 BTG4Q9NY30 223 aa27.1■■□□□ 1.93
VRK2-201ENST00000340157 TEFQ10587 303 aa27.1■■□□□ 1.93
VRK2-201ENST00000340157 KCNQ3O43525 872 aa27.08■■□□□ 1.93
VRK2-201ENST00000340157 EVA1CP58658 441 aa27.08■■□□□ 1.93
VRK2-201ENST00000340157 KDM2BQ8NHM5 1336 aa27.08■■□□□ 1.93
VRK2-201ENST00000340157 TMEM57Q8N5G2 664 aa27.08■■□□□ 1.93
VRK2-201ENST00000340157 IFNL2Q8IZJ0 200 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms