RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ZC3H6P61129 1189 aaKnown RBP19.65■□□□□ 0.74
MBD1-203ENST00000339998 C19orf44Q9H6X5 657 aa19.65■□□□□ 0.74
MBD1-203ENST00000339998 ANP32EQ9BTT0 268 aa19.65■□□□□ 0.74
MBD1-203ENST00000339998 FAM161AQ3B820 660 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 IL17REQ8NFR9 667 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 IP6K1Q92551 441 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 NWD1Q149M9 1564 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 LTN1O94822 1766 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 ERICH6Q7L0X2 663 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 CABLES1Q8TDN4 633 aa19.64■□□□□ 0.73
MBD1-203ENST00000339998 SEC24BO95487 1268 aa19.63■□□□□ 0.73
MBD1-203ENST00000339998 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
MBD1-203ENST00000339998 ZBTB7BO15156 539 aaPredicted RBP19.62■□□□□ 0.73
MBD1-203ENST00000339998 G2E3Q7L622 706 aa19.62■□□□□ 0.73
MBD1-203ENST00000339998 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
MBD1-203ENST00000339998 C1orf167Q5SNV9 1468 aa19.61■□□□□ 0.73
MBD1-203ENST00000339998 ATF3P18847 181 aa19.61■□□□□ 0.73
MBD1-203ENST00000339998 GNAT3A8MTJ3 354 aa19.61■□□□□ 0.73
MBD1-203ENST00000339998 STRCP1A6NGW2 1772 aa19.6■□□□□ 0.73
MBD1-203ENST00000339998 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
MBD1-203ENST00000339998 LGR6Q9HBX8 967 aa19.6■□□□□ 0.73
MBD1-203ENST00000339998 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
MBD1-203ENST00000339998 RGPD2P0DJD1 1756 aa19.6■□□□□ 0.73
MBD1-203ENST00000339998 NFAT5O94916 1531 aa19.6■□□□□ 0.73
MBD1-203ENST00000339998 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
MBD1-203ENST00000339998 BRPF1P55201 1214 aaPredicted RBP19.6■□□□□ 0.73
MBD1-203ENST00000339998 SLC4A3P48751 1232 aa19.59■□□□□ 0.73
MBD1-203ENST00000339998 F6X3S4 739 aa19.59■□□□□ 0.73
MBD1-203ENST00000339998 ARHGEF25Q86VW2 580 aa19.59■□□□□ 0.73
MBD1-203ENST00000339998 MSH6P52701 1360 aa19.58■□□□□ 0.73
MBD1-203ENST00000339998 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
MBD1-203ENST00000339998 KCNH5Q8NCM2 988 aa19.57■□□□□ 0.72
MBD1-203ENST00000339998 ABCC4O15439 1325 aa19.57■□□□□ 0.72
MBD1-203ENST00000339998 AAMPQ13685 434 aa19.57■□□□□ 0.72
MBD1-203ENST00000339998 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
MBD1-203ENST00000339998 ARHGAP45Q92619 1136 aa19.56■□□□□ 0.72
MBD1-203ENST00000339998 LNPKQ9C0E8 428 aa19.56■□□□□ 0.72
MBD1-203ENST00000339998 ZBTB47Q9UFB7 747 aaPredicted RBP19.56■□□□□ 0.72
MBD1-203ENST00000339998 ANKRD24Q8TF21 1146 aa19.56■□□□□ 0.72
MBD1-203ENST00000339998 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
MBD1-203ENST00000339998 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
MBD1-203ENST00000339998 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
MBD1-203ENST00000339998 KCNQ3O43525 872 aa19.54■□□□□ 0.72
MBD1-203ENST00000339998 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
MBD1-203ENST00000339998 MAP3K5Q99683 1374 aa19.54■□□□□ 0.72
MBD1-203ENST00000339998 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
MBD1-203ENST00000339998 API5Q9BZZ5 524 aaKnown RBP19.53■□□□□ 0.72
MBD1-203ENST00000339998 MST1RQ04912 1400 aa19.53■□□□□ 0.72
MBD1-203ENST00000339998 RGS12O14924 1447 aa19.52■□□□□ 0.72
MBD1-203ENST00000339998 SMC5Q8IY18 1101 aa19.52■□□□□ 0.71
MBD1-203ENST00000339998 RTL1A6NKG5 1358 aa19.52■□□□□ 0.71
MBD1-203ENST00000339998 KIAA0232Q92628 1395 aa19.52■□□□□ 0.71
MBD1-203ENST00000339998 USP54Q70EL1 1684 aa19.51■□□□□ 0.71
MBD1-203ENST00000339998 ZNF530Q6P9A1 599 aaPredicted RBP19.51■□□□□ 0.71
MBD1-203ENST00000339998 MEIS3Q99687 375 aa19.5■□□□□ 0.71
MBD1-203ENST00000339998 ZNF335Q9H4Z2 1342 aaPredicted RBP19.5■□□□□ 0.71
MBD1-203ENST00000339998 TAF7Q15545 349 aaPredicted RBP19.5■□□□□ 0.71
MBD1-203ENST00000339998 ANKRD45Q5TZF3 282 aa19.5■□□□□ 0.71
MBD1-203ENST00000339998 EIF2S2P20042 333 aaKnown RBP19.49■□□□□ 0.71
MBD1-203ENST00000339998 RGPD5Q99666 1765 aa19.49■□□□□ 0.71
MBD1-203ENST00000339998 NBR1Q14596 966 aa19.49■□□□□ 0.71
MBD1-203ENST00000339998 APBB1O00213 710 aa19.48■□□□□ 0.71
MBD1-203ENST00000339998 USP19O94966 1318 aa19.48■□□□□ 0.71
MBD1-203ENST00000339998 ANXA1P04083 346 aa19.48■□□□□ 0.71
MBD1-203ENST00000339998 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
MBD1-203ENST00000339998 PXDNQ92626 1479 aa19.48■□□□□ 0.71
MBD1-203ENST00000339998 NLRP2Q9NX02 1062 aa19.47■□□□□ 0.71
MBD1-203ENST00000339998 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
MBD1-203ENST00000339998 MED1Q15648 1581 aaPredicted RBP19.46■□□□□ 0.71
MBD1-203ENST00000339998 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
MBD1-203ENST00000339998 CADPS2Q86UW7 1296 aa19.46■□□□□ 0.71
MBD1-203ENST00000339998 PHAXQ9H814 394 aaKnown RBP19.46■□□□□ 0.71
MBD1-203ENST00000339998 NUCB1Q02818 461 aa19.45■□□□□ 0.7
MBD1-203ENST00000339998 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
MBD1-203ENST00000339998 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
MBD1-203ENST00000339998 SLIT3O75094 1523 aa19.44■□□□□ 0.7
MBD1-203ENST00000339998 ERBB3P21860 1342 aa19.44■□□□□ 0.7
MBD1-203ENST00000339998 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
MBD1-203ENST00000339998 STK31Q9BXU1 1019 aa19.44■□□□□ 0.7
MBD1-203ENST00000339998 FLIIQ13045 1269 aa19.44■□□□□ 0.7
MBD1-203ENST00000339998 TEFQ10587 303 aa19.43■□□□□ 0.7
MBD1-203ENST00000339998 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
MBD1-203ENST00000339998 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
MBD1-203ENST00000339998 CSB-PGBD3P0DP91 1061 aa19.42■□□□□ 0.7
MBD1-203ENST00000339998 HDGFL1Q5TGJ6 251 aa19.42■□□□□ 0.7
MBD1-203ENST00000339998 C16orf71Q8IYS4 520 aaPredicted RBP19.42■□□□□ 0.7
MBD1-203ENST00000339998 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
MBD1-203ENST00000339998 CEMIPQ8WUJ3 1361 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 PTPRCP08575 1304 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 AKAP4Q5JQC9 854 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 C1orf141Q5JVX7 400 aa19.41■□□□□ 0.7
MBD1-203ENST00000339998 SMARCA5O60264 1052 aaPredicted RBP19.4■□□□□ 0.7
MBD1-203ENST00000339998 EIF4A1P60842 406 aaKnown RBP19.4■□□□□ 0.7
MBD1-203ENST00000339998 RNMTO43148 476 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms