RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 HOXC9P31274 260 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ORAI2Q96SN7 254 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 GNAI2P04899 355 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 HSPA2P54652 639 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
PRDM8-201ENST00000339711 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 PPLO60437 1756 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 NAP1L2Q9ULW6 460 aaPredicted RBP20.3■□□□□ 0.84
PRDM8-201ENST00000339711 F6X3S4 739 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 GOLGA6L3A6NEY3 463 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
PRDM8-201ENST00000339711 GCP02774 474 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 FGD1P98174 961 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
PRDM8-201ENST00000339711 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 KIAA1211Q6ZU35 1233 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 ANKRD24Q8TF21 1146 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
PRDM8-201ENST00000339711 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
PRDM8-201ENST00000339711 RIC3Q7Z5B4 369 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.83
PRDM8-201ENST00000339711 USP6P35125 1406 aa20.27■□□□□ 0.83
PRDM8-201ENST00000339711 SRCIN1Q9C0H9 1055 aa20.26■□□□□ 0.83
PRDM8-201ENST00000339711 KDM2BQ8NHM5 1336 aa20.26■□□□□ 0.83
PRDM8-201ENST00000339711 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
PRDM8-201ENST00000339711 GPATCH3Q96I76 525 aa20.26■□□□□ 0.83
PRDM8-201ENST00000339711 IP6K1Q92551 441 aa20.25■□□□□ 0.83
PRDM8-201ENST00000339711 PTPRCP08575 1304 aa20.25■□□□□ 0.83
PRDM8-201ENST00000339711 HDAC1Q13547 482 aaPredicted RBP20.25■□□□□ 0.83
PRDM8-201ENST00000339711 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
PRDM8-201ENST00000339711 FLIIQ13045 1269 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 HTATSF1O43719 755 aaKnown RBP20.23■□□□□ 0.83
PRDM8-201ENST00000339711 CDC45O75419 566 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 IL27Q8NEV9 243 aa20.22■□□□□ 0.83
PRDM8-201ENST00000339711 MSNP26038 577 aaKnown RBP20.22■□□□□ 0.83
PRDM8-201ENST00000339711 CHRNA2Q15822 529 aa20.22■□□□□ 0.83
PRDM8-201ENST00000339711 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
PRDM8-201ENST00000339711 CHL1O00533 1208 aa20.22■□□□□ 0.83
PRDM8-201ENST00000339711 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
PRDM8-201ENST00000339711 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
PRDM8-201ENST00000339711 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
PRDM8-201ENST00000339711 REC8O95072 547 aa20.21■□□□□ 0.83
PRDM8-201ENST00000339711 CABP4P57796 275 aa20.21■□□□□ 0.83
PRDM8-201ENST00000339711 DLC1Q96QB1 1528 aa20.2■□□□□ 0.82
PRDM8-201ENST00000339711 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
PRDM8-201ENST00000339711 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
PRDM8-201ENST00000339711 MSH6P52701 1360 aa20.2■□□□□ 0.82
PRDM8-201ENST00000339711 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
PRDM8-201ENST00000339711 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
PRDM8-201ENST00000339711 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
PRDM8-201ENST00000339711 ADAMTS13Q76LX8 1427 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 BRPF3Q9ULD4 1205 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 MED14O60244 1454 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 PNPLA6Q8IY17 1366 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 CPSF1Q10570 1443 aaKnown RBP20.17■□□□□ 0.82
PRDM8-201ENST00000339711 MYL6BP14649 208 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRDM8-201ENST00000339711 MEIS3Q99687 375 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 CDK12Q9NYV4 1490 aaPredicted RBP20.17■□□□□ 0.82
PRDM8-201ENST00000339711 GOLGA6L4A6NEF3 574 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 C8orf34Q49A92 452 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 ST18O60284 1047 aa20.16■□□□□ 0.82
PRDM8-201ENST00000339711 IFIT2P09913 472 aaKnown RBP20.16■□□□□ 0.82
PRDM8-201ENST00000339711 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
PRDM8-201ENST00000339711 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
PRDM8-201ENST00000339711 LRRCC1Q9C099 1032 aa20.16■□□□□ 0.82
PRDM8-201ENST00000339711 ARHGEF10O15013 1369 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 AKAP4Q5JQC9 854 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
PRDM8-201ENST00000339711 NBPF6Q5VWK0 638 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 NPHP4O75161 1426 aaPredicted RBP20.15■□□□□ 0.82
PRDM8-201ENST00000339711 SRGAP3O43295 1099 aa20.14■□□□□ 0.82
PRDM8-201ENST00000339711 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
PRDM8-201ENST00000339711 ANXA1P04083 346 aa20.14■□□□□ 0.81
PRDM8-201ENST00000339711 NUCB1Q02818 461 aa20.14■□□□□ 0.81
PRDM8-201ENST00000339711 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
PRDM8-201ENST00000339711 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms