RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 CASC1Q6TDU7 716 aa24.62■■□□□ 1.53
UBC-201ENST00000339647 ZNF830Q96NB3 372 aaPredicted RBP24.62■■□□□ 1.53
UBC-201ENST00000339647 TERF2IPQ9NYB0 399 aa24.62■■□□□ 1.53
UBC-201ENST00000339647 RPGRIP1LQ68CZ1 1315 aa24.61■■□□□ 1.53
UBC-201ENST00000339647 MYRIPQ8NFW9 859 aa24.6■■□□□ 1.53
UBC-201ENST00000339647 TMX3Q96JJ7 454 aa24.6■■□□□ 1.53
UBC-201ENST00000339647 IFT57Q9NWB7 429 aa24.6■■□□□ 1.53
UBC-201ENST00000339647 NEK4P51957 841 aa24.6■■□□□ 1.53
UBC-201ENST00000339647 FOXD4L6Q3SYB3 417 aaPredicted RBP24.6■■□□□ 1.53
UBC-201ENST00000339647 FOXD4L3Q6VB84 417 aaPredicted RBP24.6■■□□□ 1.53
UBC-201ENST00000339647 PODXL2Q9NZ53 605 aa24.6■■□□□ 1.53
UBC-201ENST00000339647 MINK1Q8N4C8 1332 aaPredicted RBP24.6■■□□□ 1.53
UBC-201ENST00000339647 ZNF853P0CG23 659 aa24.59■■□□□ 1.53
UBC-201ENST00000339647 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
UBC-201ENST00000339647 REC8O95072 547 aa24.59■■□□□ 1.53
UBC-201ENST00000339647 ANKRD44Q8N8A2 993 aa24.58■■□□□ 1.53
UBC-201ENST00000339647 CD163L1Q9NR16 1453 aa24.58■■□□□ 1.52
UBC-201ENST00000339647 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.52
UBC-201ENST00000339647 BRD1O95696 1058 aa24.58■■□□□ 1.52
UBC-201ENST00000339647 ERC2O15083 957 aa24.57■■□□□ 1.52
UBC-201ENST00000339647 ZNF710Q8N1W2 664 aa24.57■■□□□ 1.52
UBC-201ENST00000339647 NOL8Q76FK4 1167 aaKnown RBP24.57■■□□□ 1.52
UBC-201ENST00000339647 GDPD2Q9HCC8 539 aa24.57■■□□□ 1.52
UBC-201ENST00000339647 C17orf53Q8N3J3 647 aaPredicted RBP24.56■■□□□ 1.52
UBC-201ENST00000339647 POLKQ9UBT6 870 aa24.56■■□□□ 1.52
UBC-201ENST00000339647 FAM177BA6PVY3 158 aa24.56■■□□□ 1.52
UBC-201ENST00000339647 VGFO15240 615 aaPredicted RBP24.56■■□□□ 1.52
UBC-201ENST00000339647 GADD45BO75293 160 aaPredicted RBP24.56■■□□□ 1.52
UBC-201ENST00000339647 CEP85Q6P2H3 762 aa24.55■■□□□ 1.52
UBC-201ENST00000339647 ANKRD26Q9UPS8 1709 aa24.55■■□□□ 1.52
UBC-201ENST00000339647 ATP10DQ9P241 1426 aa24.55■■□□□ 1.52
UBC-201ENST00000339647 FAM83GA6ND36 823 aa24.54■■□□□ 1.52
UBC-201ENST00000339647 ZSCAN20P17040 1043 aaPredicted RBP24.54■■□□□ 1.52
UBC-201ENST00000339647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.54■■□□□ 1.52
UBC-201ENST00000339647 DMTNQ08495 405 aa24.53■■□□□ 1.52
UBC-201ENST00000339647 DCTN1Q14203 1278 aa24.52■■□□□ 1.52
UBC-201ENST00000339647 NOLC1Q14978 699 aaKnown RBP eCLIP24.52■■□□□ 1.524e-29■■□□□ 13.6
UBC-201ENST00000339647 TTC12Q9H892 705 aaPredicted RBP24.52■■□□□ 1.52
UBC-201ENST00000339647 KRT24Q2M2I5 525 aa24.52■■□□□ 1.52
UBC-201ENST00000339647 HDGFL2Q7Z4V5 671 aaPredicted RBP24.52■■□□□ 1.52
UBC-201ENST00000339647 PIBF1Q8WXW3 757 aa24.52■■□□□ 1.52
UBC-201ENST00000339647 USP25Q9UHP3 1055 aa24.52■■□□□ 1.52
UBC-201ENST00000339647 RPAP2Q8IXW5 612 aaPredicted RBP24.51■■□□□ 1.51
UBC-201ENST00000339647 CABP1Q9NZU7 370 aa24.51■■□□□ 1.51
UBC-201ENST00000339647 YEATS2Q9ULM3 1422 aa24.51■■□□□ 1.51
UBC-201ENST00000339647 CDC42BPGQ6DT37 1551 aa24.51■■□□□ 1.51
UBC-201ENST00000339647 CBX1P83916 185 aa24.51■■□□□ 1.51
UBC-201ENST00000339647 SYAP1Q96A49 352 aaPredicted RBP24.5■■□□□ 1.51
UBC-201ENST00000339647 KIF24Q5T7B8 1368 aa24.5■■□□□ 1.51
UBC-201ENST00000339647 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
UBC-201ENST00000339647 PRAM1Q96QH2 718 aa24.5■■□□□ 1.51
UBC-201ENST00000339647 ZFYVE9O95405 1425 aa24.5■■□□□ 1.51
UBC-201ENST00000339647 FAM69CQ0P6D2 419 aa24.49■■□□□ 1.51
UBC-201ENST00000339647 PRIMPOLQ96LW4 560 aa24.49■■□□□ 1.51
UBC-201ENST00000339647 PALD1Q9ULE6 856 aa24.49■■□□□ 1.51
UBC-201ENST00000339647 CUL4AQ13619 759 aa24.49■■□□□ 1.51
UBC-201ENST00000339647 TPRNQ4KMQ1 711 aa24.49■■□□□ 1.51
UBC-201ENST00000339647 USP48Q86UV5 1035 aa24.48■■□□□ 1.51
UBC-201ENST00000339647 MEIS3Q99687 375 aa24.48■■□□□ 1.51
UBC-201ENST00000339647 UTP14CQ5TAP6 766 aaKnown RBP24.48■■□□□ 1.51
UBC-201ENST00000339647 EMILIN1Q9Y6C2 1016 aa24.48■■□□□ 1.51
UBC-201ENST00000339647 TSHZ3Q63HK5 1081 aa24.48■■□□□ 1.51
UBC-201ENST00000339647 ADCY5O95622 1261 aa24.47■■□□□ 1.51
UBC-201ENST00000339647 HMGN5P82970 282 aaKnown RBP24.47■■□□□ 1.51
UBC-201ENST00000339647 RTL1A6NKG5 1358 aa24.46■■□□□ 1.51
UBC-201ENST00000339647 ATP2B3Q16720 1220 aa24.46■■□□□ 1.51
UBC-201ENST00000339647 GTF2F1P35269 517 aaKnown RBP eCLIP24.46■■□□□ 1.519e-7■■□□□ 13.9
UBC-201ENST00000339647 ABCC3O15438 1527 aa24.46■■□□□ 1.51
UBC-201ENST00000339647 MSH6P52701 1360 aa24.45■■□□□ 1.51
UBC-201ENST00000339647 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.5
UBC-201ENST00000339647 PDE1AP54750 535 aa24.45■■□□□ 1.5
UBC-201ENST00000339647 PPP4R3BQ5MIZ7 849 aa24.45■■□□□ 1.5
UBC-201ENST00000339647 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.5
UBC-201ENST00000339647 CDK19Q9BWU1 502 aa24.45■■□□□ 1.5
UBC-201ENST00000339647 PHF14O94880 888 aa24.44■■□□□ 1.5
UBC-201ENST00000339647 IL13P35225 146 aa24.44■■□□□ 1.5
UBC-201ENST00000339647 A0A0U1RQG5 324 aaPredicted RBP24.44■■□□□ 1.5
UBC-201ENST00000339647 MCM2P49736 904 aa24.44■■□□□ 1.5
UBC-201ENST00000339647 RGS12O14924 1447 aa24.44■■□□□ 1.5
UBC-201ENST00000339647 UVSSAQ2YD98 709 aa24.43■■□□□ 1.5
UBC-201ENST00000339647 KIF3AQ9Y496 699 aa24.43■■□□□ 1.5
UBC-201ENST00000339647 HCLS1P14317 486 aaPredicted RBP24.42■■□□□ 1.5
UBC-201ENST00000339647 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
UBC-201ENST00000339647 FAM184AQ8NB25 1140 aa24.42■■□□□ 1.5
UBC-201ENST00000339647 INTS4Q96HW7 963 aaKnown RBP24.42■■□□□ 1.5
UBC-201ENST00000339647 ESYT1Q9BSJ8 1104 aa24.42■■□□□ 1.5
UBC-201ENST00000339647 UPF3BQ9BZI7 483 aaKnown RBP24.42■■□□□ 1.5
UBC-201ENST00000339647 POGZQ7Z3K3 1410 aa24.42■■□□□ 1.5
UBC-201ENST00000339647 YTHDC2Q9H6S0 1430 aaKnown RBP24.42■■□□□ 1.5
UBC-201ENST00000339647 PTPRMP28827 1452 aa24.41■■□□□ 1.5
UBC-201ENST00000339647 FKBP5Q13451 457 aaPredicted RBP24.41■■□□□ 1.5
UBC-201ENST00000339647 BCL2L12Q9HB09 334 aa24.41■■□□□ 1.5
UBC-201ENST00000339647 TCHHQ07283 1943 aa24.4■■□□□ 1.5
UBC-201ENST00000339647 PLEKHG5O94827 1062 aa24.4■■□□□ 1.5
UBC-201ENST00000339647 SPTLC3Q9NUV7 552 aa24.4■■□□□ 1.5
UBC-201ENST00000339647 KIF20BQ96Q89 1820 aa24.4■■□□□ 1.5
UBC-201ENST00000339647 LMOD3Q0VAK6 560 aa24.39■■□□□ 1.5
UBC-201ENST00000339647 OSBPL3Q9H4L5 887 aa24.39■■□□□ 1.5
UBC-201ENST00000339647 ANO2Q9NQ90 1003 aa24.39■■□□□ 1.5
UBC-201ENST00000339647 MAP2P11137 1827 aaKnown RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms