RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 EXOSC9Q06265 439 aaKnown RBP13.82□□□□□ -0.2
SHANK2-201ENST00000338508 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 CAMK4Q16566 473 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 ANKIB1Q9P2G1 1089 aa13.82□□□□□ -0.2
SHANK2-201ENST00000338508 SULT6B1Q6IMI4 303 aa13.81□□□□□ -0.2
SHANK2-201ENST00000338508 PPP4R3AQ6IN85 833 aa13.81□□□□□ -0.2
SHANK2-201ENST00000338508 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
SHANK2-201ENST00000338508 GSTTP1A0A1W2PQM5 241 aa13.81□□□□□ -0.2
SHANK2-201ENST00000338508 EPB41L2O43491 1005 aaKnown RBP13.81□□□□□ -0.2
SHANK2-201ENST00000338508 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
SHANK2-201ENST00000338508 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
SHANK2-201ENST00000338508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■■■■□ 20.4
SHANK2-201ENST00000338508 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
SHANK2-201ENST00000338508 TNIP1Q15025 636 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 SPATA32Q96LK8 384 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 JAKMIP1Q96N16 626 aaKnown RBP13.8□□□□□ -0.2
SHANK2-201ENST00000338508 PDZRN3Q9UPQ7 1066 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 ZNF530Q6P9A1 599 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-201ENST00000338508 TXLNBQ8N3L3 684 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 BTBD11A6QL63 1104 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■□□□□ 8.1
SHANK2-201ENST00000338508 MKNK2Q9HBH9 465 aa13.8□□□□□ -0.2
SHANK2-201ENST00000338508 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 EIF3JO75822 258 aaKnown RBP13.79□□□□□ -0.2
SHANK2-201ENST00000338508 SPTY2D1Q68D10 685 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-201ENST00000338508 ZNF397Q8NF99 534 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-201ENST00000338508 MBD3O95983 291 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 IGHMBP2P38935 993 aaKnown RBP13.79□□□□□ -0.2
SHANK2-201ENST00000338508 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 PTPRGP23470 1445 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 STAMBPO95630 424 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 SMC1AQ14683 1233 aaKnown RBP13.79□□□□□ -0.2
SHANK2-201ENST00000338508 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
SHANK2-201ENST00000338508 ERLIN1O75477 346 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 KRT85P78386 507 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 ANKRD1Q15327 319 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 CBFA2T2O43439 604 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 GUCY1B3Q02153 619 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 AIDAQ96BJ3 306 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 CTNNA2P26232 953 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 BLOC1S2Q6QNY1 142 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
SHANK2-201ENST00000338508 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.2
SHANK2-201ENST00000338508 ZNF354CQ86Y25 554 aa13.77□□□□□ -0.2
SHANK2-201ENST00000338508 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.2
SHANK2-201ENST00000338508 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.2
SHANK2-201ENST00000338508 GIMAP7Q8NHV1 300 aa13.77□□□□□ -0.2
SHANK2-201ENST00000338508 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.2
SHANK2-201ENST00000338508 WDHD1O75717 1129 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-201ENST00000338508 IQCEQ6IPM2 695 aa13.77□□□□□ -0.21
SHANK2-201ENST00000338508 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
SHANK2-201ENST00000338508 PRAM1Q96QH2 718 aa13.77□□□□□ -0.21
SHANK2-201ENST00000338508 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
SHANK2-201ENST00000338508 CACNA2D4Q7Z3S7 1137 aa13.77□□□□□ -0.21
SHANK2-201ENST00000338508 CETN2P41208 172 aa13.77□□□□□ -0.21
SHANK2-201ENST00000338508 METTL24Q5JXM2 366 aa13.77□□□□□ -0.21
SHANK2-201ENST00000338508 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
SHANK2-201ENST00000338508 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 ZPR1O75312 459 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 USP8P40818 1118 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 AEBP1Q8IUX7 1158 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 HOMER2Q9NSB8 354 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 CDKL5O76039 1030 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 CCDC148Q8NFR7 591 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 UQCRHP07919 91 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 MRPS9P82933 396 aaKnown RBP13.76□□□□□ -0.21
SHANK2-201ENST00000338508 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
SHANK2-201ENST00000338508 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-201ENST00000338508 MCM2P49736 904 aa13.75□□□□□ -0.21
SHANK2-201ENST00000338508 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
SHANK2-201ENST00000338508 DDX23Q9BUQ8 820 aaKnown RBP13.75□□□□□ -0.21
SHANK2-201ENST00000338508 TMCO5BA8MYB1 307 aa13.75□□□□□ -0.21
SHANK2-201ENST00000338508 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
SHANK2-201ENST00000338508 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
SHANK2-201ENST00000338508 RRS1Q15050 365 aaKnown RBP13.75□□□□□ -0.21
SHANK2-201ENST00000338508 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
SHANK2-201ENST00000338508 ADAMTS2O95450 1211 aa13.74□□□□□ -0.21
SHANK2-201ENST00000338508 SPA17Q15506 151 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms