RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TMEM2Q9UHN6 1383 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 PLEKHG3A1L390 1219 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 DRC7Q8IY82 874 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 DBF4Q9UBU7 674 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-202ENST00000338368 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
PRKDC-202ENST00000338368 C8orf34Q49A92 452 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 BMP2KLQ5H9B9 411 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 DNAAF4Q8WXU2 420 aa7.62□□□□□ -1.19
PRKDC-202ENST00000338368 MAP4K4O95819 1239 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-202ENST00000338368 PSMA5P28066 241 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 LTKP29376 864 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 TRMT2AQ8IZ69 625 aaKnown RBP7.61□□□□□ -1.19
PRKDC-202ENST00000338368 ANKRD44Q8N8A2 993 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 MX1P20591 662 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 ZBTB40Q9NUA8 1239 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 H3BQV1 296 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 IFFO2Q5TF58 517 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 LARP1Q6PKG0 1096 aaKnown RBP7.61□□□□□ -1.19
PRKDC-202ENST00000338368 NUTM1Q86Y26 1132 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 ERVK-7P63135 1459 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 ZFYVE9O95405 1425 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 NUCB1Q02818 461 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 PTCD1O75127 700 aaKnown RBP7.61□□□□□ -1.19
PRKDC-202ENST00000338368 KIF1BPQ96EK5 621 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 TTC37Q6PGP7 1564 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 VPS37CA5D8V6 355 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-202ENST00000338368 IFNL2Q8IZJ0 200 aa7.61□□□□□ -1.19
PRKDC-202ENST00000338368 CADPS2Q86UW7 1296 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 GOLGA6L6A8MZA4 724 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-202ENST00000338368 WASHC4Q2M389 1173 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 TRPM2O94759 1503 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 PRDM15P57071 1507 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-202ENST00000338368 UGGT1Q9NYU2 1555 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 CPLX2Q6PUV4 134 aaKnown RBP7.6□□□□□ -1.19
PRKDC-202ENST00000338368 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 RAB11FIP3O75154 756 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 HIP1O00291 1037 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 APPP05067 770 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 ZNF521Q96K83 1311 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 PI4KAP2A4QPH2 592 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 PHF14O94880 888 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 PI4KAP1Q8N8J0 262 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 EDC4Q6P2E9 1401 aaKnown RBP7.6□□□□□ -1.19
PRKDC-202ENST00000338368 FAM177BA6PVY3 158 aa7.6□□□□□ -1.19
PRKDC-202ENST00000338368 SF3A1Q15459 793 aaKnown RBP7.6□□□□□ -1.19
PRKDC-202ENST00000338368 LRRC59Q96AG4 307 aaKnown RBP7.6□□□□□ -1.19
PRKDC-202ENST00000338368 MYOM2P54296 1465 aa7.59□□□□□ -1.19
PRKDC-202ENST00000338368 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
PRKDC-202ENST00000338368 CHRNA2Q15822 529 aa7.59□□□□□ -1.19
PRKDC-202ENST00000338368 ANXA1P04083 346 aa7.59□□□□□ -1.19
PRKDC-202ENST00000338368 C19orf44Q9H6X5 657 aa7.59□□□□□ -1.19
PRKDC-202ENST00000338368 GLRX3O76003 335 aaKnown RBP7.59□□□□□ -1.19
PRKDC-202ENST00000338368 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
PRKDC-202ENST00000338368 KDM2BQ8NHM5 1336 aa7.59□□□□□ -1.19
PRKDC-202ENST00000338368 AACSQ86V21 672 aa7.59□□□□□ -1.19
PRKDC-202ENST00000338368 AKAP4Q5JQC9 854 aa7.59□□□□□ -1.2
PRKDC-202ENST00000338368 DCTPP1Q9H773 170 aa7.59□□□□□ -1.2
PRKDC-202ENST00000338368 PRPF40AO75400 957 aaKnown RBP7.58□□□□□ -1.2
PRKDC-202ENST00000338368 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 TBC1D9Q6ZT07 1266 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 TBC1D32Q96NH3 1257 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 HOXC9P31274 260 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 MCM4P33991 863 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 TRDNQ13061 729 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 KIF6Q6ZMV9 814 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 CYP46A1Q9Y6A2 500 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 CWC27Q6UX04 472 aaKnown RBP7.58□□□□□ -1.2
PRKDC-202ENST00000338368 CIZ1Q9ULV3 898 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-202ENST00000338368 POLR1AO95602 1720 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-202ENST00000338368 NRDCO43847 1150 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 C16orf71Q8IYS4 520 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-202ENST00000338368 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 ORAI2Q96SN7 254 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 MRE11P49959 708 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 MYD88Q99836 296 aa7.58□□□□□ -1.2
PRKDC-202ENST00000338368 METP08581 1390 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 SYNE3Q6ZMZ3 975 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 NUTM2BA6NNL0 878 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-202ENST00000338368 NUTM2EB1AL46 878 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-202ENST00000338368 CPLX1O14810 134 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 NUTM2AQ8IVF1 878 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-202ENST00000338368 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-202ENST00000338368 HYPKQ9NX55 129 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 KDM5CP41229 1560 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 FMNL2Q96PY5 1086 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 CEP126Q9P2H0 1117 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 ZMYM4Q5VZL5 1548 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 CHL1O00533 1208 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 UPF3BQ9BZI7 483 aaKnown RBP7.57□□□□□ -1.2
PRKDC-202ENST00000338368 CNNM1Q9NRU3 951 aa7.57□□□□□ -1.2
PRKDC-202ENST00000338368 CCDC158Q5M9N0 1113 aa7.56□□□□□ -1.2
PRKDC-202ENST00000338368 PPP1R42Q7Z4L9 355 aa7.56□□□□□ -1.2
PRKDC-202ENST00000338368 RHPN1Q8TCX5 695 aa7.56□□□□□ -1.2
PRKDC-202ENST00000338368 IP6K1Q92551 441 aa7.56□□□□□ -1.2
PRKDC-202ENST00000338368 CCDC8Q9H0W5 538 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-202ENST00000338368 CHPF2Q9P2E5 772 aa7.56□□□□□ -1.2
PRKDC-202ENST00000338368 CCDC57Q2TAC2 916 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms