RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 ZCRB1Q8TBF4 217 aaKnown RBP28.73■■■□□ 2.19
RAB28-203ENST00000338176 NSD2O96028 1365 aa28.72■■■□□ 2.19
RAB28-203ENST00000338176 MORC1Q86VD1 984 aa28.72■■■□□ 2.19
RAB28-203ENST00000338176 PLSCR1O15162 318 aa28.71■■■□□ 2.19
RAB28-203ENST00000338176 PROM2Q8N271 834 aa28.71■■■□□ 2.19
RAB28-203ENST00000338176 AMER1Q5JTC6 1135 aaPredicted RBP28.7■■■□□ 2.19
RAB28-203ENST00000338176 RAPGEF4Q8WZA2 1011 aa28.7■■■□□ 2.19
RAB28-203ENST00000338176 RGPD3A6NKT7 1758 aaPredicted RBP28.69■■■□□ 2.18
RAB28-203ENST00000338176 RGPD4Q7Z3J3 1758 aa28.69■■■□□ 2.18
RAB28-203ENST00000338176 EYA1Q99502 592 aa28.68■■■□□ 2.18
RAB28-203ENST00000338176 TATP17735 454 aaPredicted RBP28.67■■■□□ 2.18
RAB28-203ENST00000338176 EIF4A2Q14240 407 aaKnown RBP28.67■■■□□ 2.18
RAB28-203ENST00000338176 BTAF1O14981 1849 aa28.67■■■□□ 2.18
RAB28-203ENST00000338176 PER1O15534 1290 aaPredicted RBP28.67■■■□□ 2.18
RAB28-203ENST00000338176 NCAPD2Q15021 1401 aa28.65■■■□□ 2.18
RAB28-203ENST00000338176 DOT1LQ8TEK3 1739 aa28.64■■■□□ 2.18
RAB28-203ENST00000338176 ANO8Q9HCE9 1232 aaPredicted RBP28.64■■■□□ 2.18
RAB28-203ENST00000338176 CNGB1Q14028 1251 aaPredicted RBP28.63■■■□□ 2.17
RAB28-203ENST00000338176 TXNRD1Q16881 649 aa28.63■■■□□ 2.17
RAB28-203ENST00000338176 PRIM1P49642 420 aaKnown RBP28.62■■■□□ 2.17
RAB28-203ENST00000338176 CC2D1BQ5T0F9 858 aaKnown RBP28.62■■■□□ 2.17
RAB28-203ENST00000338176 NBPF14Q5TI25 921 aa28.62■■■□□ 2.17
RAB28-203ENST00000338176 SYTL4Q96C24 671 aaPredicted RBP28.62■■■□□ 2.17
RAB28-203ENST00000338176 CYP27B1O15528 508 aa28.59■■■□□ 2.17
RAB28-203ENST00000338176 PKD1L3Q7Z443 1732 aa28.57■■■□□ 2.16
RAB28-203ENST00000338176 PCDH11XQ9BZA7 1347 aa28.57■■■□□ 2.16
RAB28-203ENST00000338176 PCDH11YQ9BZA8 1340 aa28.57■■■□□ 2.16
RAB28-203ENST00000338176 IGSF1Q8N6C5 1336 aa28.54■■■□□ 2.16
RAB28-203ENST00000338176 LRP5O75197 1615 aa28.53■■■□□ 2.16
RAB28-203ENST00000338176 PDGFDQ9GZP0 370 aaPredicted RBP28.52■■■□□ 2.16
RAB28-203ENST00000338176 LRRC4BQ9NT99 713 aa28.52■■■□□ 2.16
RAB28-203ENST00000338176 KCNQ4P56696 695 aa28.52■■■□□ 2.16
RAB28-203ENST00000338176 TOGARAM1Q9Y4F4 1720 aa28.51■■■□□ 2.15
RAB28-203ENST00000338176 MTHFSP49914 203 aa28.51■■■□□ 2.15
RAB28-203ENST00000338176 AEBP1Q8IUX7 1158 aa28.51■■■□□ 2.15
RAB28-203ENST00000338176 SPG7Q9UQ90 795 aa28.5■■■□□ 2.15
RAB28-203ENST00000338176 IL13P35225 146 aa28.47■■■□□ 2.15
RAB28-203ENST00000338176 PAPPAQ13219 1627 aa28.47■■■□□ 2.15
RAB28-203ENST00000338176 SLC15A2Q16348 729 aa28.46■■■□□ 2.15
RAB28-203ENST00000338176 STK32BQ9NY57 414 aa28.46■■■□□ 2.15
RAB28-203ENST00000338176 ITGB4P16144 1822 aa28.45■■■□□ 2.15
RAB28-203ENST00000338176 MPRIPQ6WCQ1 1025 aa28.45■■■□□ 2.15
RAB28-203ENST00000338176 NPC1L1Q9UHC9 1359 aa28.45■■■□□ 2.14
RAB28-203ENST00000338176 ZNF827Q17R98 1081 aa28.45■■■□□ 2.14
RAB28-203ENST00000338176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.45■■■□□ 2.141e-6■■□□□ 13.8
RAB28-203ENST00000338176 CASZ1Q86V15 1759 aa28.44■■■□□ 2.14
RAB28-203ENST00000338176 LY75O60449 1722 aa28.44■■■□□ 2.14
RAB28-203ENST00000338176 PHKG2P15735 406 aa28.43■■■□□ 2.14
RAB28-203ENST00000338176 NKX1-1Q15270 411 aaPredicted RBP28.43■■■□□ 2.14
RAB28-203ENST00000338176 SULT6B1Q6IMI4 303 aa28.43■■■□□ 2.14
RAB28-203ENST00000338176 IFNL2Q8IZJ0 200 aa28.41■■■□□ 2.14
RAB28-203ENST00000338176 SLC27A3Q5K4L6 730 aa28.39■■■□□ 2.13
RAB28-203ENST00000338176 PIGBQ92521 554 aa28.39■■■□□ 2.13
RAB28-203ENST00000338176 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
RAB28-203ENST00000338176 CCNL1Q9UK58 526 aaPredicted RBP28.37■■■□□ 2.13
RAB28-203ENST00000338176 KDRP35968 1356 aa28.36■■■□□ 2.13
RAB28-203ENST00000338176 HMOX1P09601 288 aa28.36■■■□□ 2.13
RAB28-203ENST00000338176 PLEKHO1Q53GL0 409 aaPredicted RBP28.36■■■□□ 2.13
RAB28-203ENST00000338176 ZNF530Q6P9A1 599 aaPredicted RBP28.36■■■□□ 2.13
RAB28-203ENST00000338176 AKT1S1Q96B36 256 aa28.36■■■□□ 2.13
RAB28-203ENST00000338176 PALLDQ8WX93 1383 aa28.35■■■□□ 2.13
RAB28-203ENST00000338176 COL3A1P02461 1466 aaPredicted RBP28.34■■■□□ 2.13
RAB28-203ENST00000338176 SPON1Q9HCB6 807 aa28.34■■■□□ 2.13
RAB28-203ENST00000338176 DIAPH1O60610 1272 aaKnown RBP28.34■■■□□ 2.13
RAB28-203ENST00000338176 ATF5Q9Y2D1 282 aaPredicted RBP28.33■■■□□ 2.13
RAB28-203ENST00000338176 TUBGCP6Q96RT7 1819 aa28.33■■■□□ 2.13
RAB28-203ENST00000338176 TMOD3Q9NYL9 352 aa28.32■■■□□ 2.12
RAB28-203ENST00000338176 PLEKHG2Q9H7P9 1386 aa28.31■■■□□ 2.12
RAB28-203ENST00000338176 KDM6AO15550 1401 aaPredicted RBP28.31■■■□□ 2.12
RAB28-203ENST00000338176 AMOTQ4VCS5 1084 aa28.31■■■□□ 2.12
RAB28-203ENST00000338176 ASAP1Q9ULH1 1129 aa28.3■■■□□ 2.12
RAB28-203ENST00000338176 TFCP2L1Q9NZI6 479 aa28.27■■■□□ 2.12
RAB28-203ENST00000338176 PNPLA7Q6ZV29 1317 aa28.27■■■□□ 2.12
RAB28-203ENST00000338176 C5P01031 1676 aa28.27■■■□□ 2.12
RAB28-203ENST00000338176 PPP2R1AP30153 589 aa28.27■■■□□ 2.12
RAB28-203ENST00000338176 TAF1LQ8IZX4 1826 aa28.26■■■□□ 2.12
RAB28-203ENST00000338176 U2SURPO15042 1029 aaKnown RBP28.26■■■□□ 2.11
RAB28-203ENST00000338176 PTGER2P43116 358 aa28.26■■■□□ 2.11
RAB28-203ENST00000338176 C1orf141Q5JVX7 400 aa28.26■■■□□ 2.11
RAB28-203ENST00000338176 SMARCC1Q92922 1105 aaPredicted RBP28.26■■■□□ 2.11
RAB28-203ENST00000338176 DCAF5Q96JK2 942 aa28.26■■■□□ 2.11
RAB28-203ENST00000338176 ATG3Q9NT62 314 aa28.25■■■□□ 2.11
RAB28-203ENST00000338176 PPP1R1BQ9UD71 204 aaPredicted RBP28.24■■■□□ 2.11
RAB28-203ENST00000338176 QSER1Q2KHR3 1735 aa28.24■■■□□ 2.11
RAB28-203ENST00000338176 HSP90AB1P08238 724 aaKnown RBP28.24■■■□□ 2.11
RAB28-203ENST00000338176 ERVV-2B6SEH9 535 aa28.23■■■□□ 2.11
RAB28-203ENST00000338176 MTFR1LQ9H019 292 aa28.22■■■□□ 2.11
RAB28-203ENST00000338176 LOC102724428A0A0B4J2F2 783 aa28.21■■■□□ 2.11
RAB28-203ENST00000338176 SIK1P57059 783 aa28.21■■■□□ 2.11
RAB28-203ENST00000338176 MTHFSDQ2M296 383 aaKnown RBP28.21■■■□□ 2.11
RAB28-203ENST00000338176 SMIM5Q71RC9 77 aa28.21■■■□□ 2.11
RAB28-203ENST00000338176 CABP4P57796 275 aa28.2■■■□□ 2.11
RAB28-203ENST00000338176 SGIP1Q9BQI5 828 aa28.19■■■□□ 2.1
RAB28-203ENST00000338176 C4BP0C0L5 1744 aa28.19■■■□□ 2.1
RAB28-203ENST00000338176 ITPK1Q13572 414 aa28.19■■■□□ 2.1
RAB28-203ENST00000338176 AMIGO3Q86WK7 504 aa28.19■■■□□ 2.1
RAB28-203ENST00000338176 LGR6Q9HBX8 967 aa28.19■■■□□ 2.1
RAB28-203ENST00000338176 SCN11AQ9UI33 1791 aa28.18■■■□□ 2.1
RAB28-203ENST00000338176 AKAP4Q5JQC9 854 aa28.18■■■□□ 2.1
RAB28-203ENST00000338176 COL23A1Q86Y22 540 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms