RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
MSL3-202ENST00000337339 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
MSL3-202ENST00000337339 NCLP19338 710 aaKnown RBP12.02□□□□□ -0.48
MSL3-202ENST00000337339 MCM4P33991 863 aa12.02□□□□□ -0.48
MSL3-202ENST00000337339 FOXD4L5Q5VV16 416 aaPredicted RBP12.02□□□□□ -0.48
MSL3-202ENST00000337339 CASC1Q6TDU7 716 aa12.02□□□□□ -0.48
MSL3-202ENST00000337339 FOXD4L4Q8WXT5 416 aaPredicted RBP12.02□□□□□ -0.48
MSL3-202ENST00000337339 HMMRO75330 724 aa12.02□□□□□ -0.49
MSL3-202ENST00000337339 TPRNQ4KMQ1 711 aa12.02□□□□□ -0.49
MSL3-202ENST00000337339 PLEKHM2Q8IWE5 1019 aa12.02□□□□□ -0.49
MSL3-202ENST00000337339 GAS2L2Q8NHY3 880 aa12.02□□□□□ -0.49
MSL3-202ENST00000337339 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
MSL3-202ENST00000337339 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 MAP2P11137 1827 aaKnown RBP12.01□□□□□ -0.49
MSL3-202ENST00000337339 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 TRAK2O60296 914 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 ANXA1P04083 346 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 GSPT1P15170 499 aaKnown RBP12.01□□□□□ -0.49
MSL3-202ENST00000337339 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 DCTPP1Q9H773 170 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 MSH6P52701 1360 aa12.01□□□□□ -0.49
MSL3-202ENST00000337339 CDK12Q9NYV4 1490 aaPredicted RBP12.01□□□□□ -0.49
MSL3-202ENST00000337339 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
MSL3-202ENST00000337339 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
MSL3-202ENST00000337339 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
MSL3-202ENST00000337339 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
MSL3-202ENST00000337339 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
MSL3-202ENST00000337339 IL1RAPL2Q9NP60 686 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 USP6P35125 1406 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 SDSP20132 328 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 FLIIQ13045 1269 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 GNAI2P04899 355 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
MSL3-202ENST00000337339 SPATA31D1Q6ZQQ2 1576 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 ADAMTS13Q76LX8 1427 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 GOLGA6L3A6NEY3 463 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 LRRC59Q96AG4 307 aaKnown RBP11.98□□□□□ -0.49
MSL3-202ENST00000337339 AGLP35573 1532 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 MAP4K4O95819 1239 aaPredicted RBP11.98□□□□□ -0.49
MSL3-202ENST00000337339 HOXC9P31274 260 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 FLT4P35916 1363 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
MSL3-202ENST00000337339 TEFQ10587 303 aa11.98□□□□□ -0.49
MSL3-202ENST00000337339 OS9Q13438 667 aaPredicted RBP11.98□□□□□ -0.49
MSL3-202ENST00000337339 PIK3R4Q99570 1358 aa11.97□□□□□ -0.49
MSL3-202ENST00000337339 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
MSL3-202ENST00000337339 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 PHAXQ9H814 394 aaKnown RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 DLC1Q96QB1 1528 aa11.97□□□□□ -0.49
MSL3-202ENST00000337339 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 LRRFIP2Q9Y608 721 aaKnown RBP11.97□□□□□ -0.49
MSL3-202ENST00000337339 PTPRCP08575 1304 aa11.97□□□□□ -0.49
MSL3-202ENST00000337339 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
MSL3-202ENST00000337339 IL17REQ8NFR9 667 aa11.96□□□□□ -0.49
MSL3-202ENST00000337339 TTC21AQ8NDW8 1320 aa11.96□□□□□ -0.49
MSL3-202ENST00000337339 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
MSL3-202ENST00000337339 GBP4Q96PP9 640 aa11.96□□□□□ -0.49
MSL3-202ENST00000337339 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.49
MSL3-202ENST00000337339 PTCH1Q13635 1447 aa11.96□□□□□ -0.5
MSL3-202ENST00000337339 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.5
MSL3-202ENST00000337339 TAF7Q15545 349 aaPredicted RBP11.96□□□□□ -0.5
MSL3-202ENST00000337339 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.5
MSL3-202ENST00000337339 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
MSL3-202ENST00000337339 PNMA6EA0A0J9YXQ4 647 aa11.95□□□□□ -0.5
MSL3-202ENST00000337339 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
MSL3-202ENST00000337339 SSFA2P28290 1259 aa11.95□□□□□ -0.5
MSL3-202ENST00000337339 RTL1A6NKG5 1358 aa11.95□□□□□ -0.5
MSL3-202ENST00000337339 ANKLE2Q86XL3 938 aa11.95□□□□□ -0.5
MSL3-202ENST00000337339 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
MSL3-202ENST00000337339 AIMP1Q12904 312 aaKnown RBP11.94□□□□□ -0.5
MSL3-202ENST00000337339 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
MSL3-202ENST00000337339 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
MSL3-202ENST00000337339 L1TD1Q5T7N2 865 aaKnown RBP11.94□□□□□ -0.5
MSL3-202ENST00000337339 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
MSL3-202ENST00000337339 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
MSL3-202ENST00000337339 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
MSL3-202ENST00000337339 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
MSL3-202ENST00000337339 KIF20BQ96Q89 1820 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
MSL3-202ENST00000337339 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 KIF2CQ99661 725 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 KCNQ3O43525 872 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 GNAI3P08754 354 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 REC8O95072 547 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 NEK4P51957 841 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 PDE1AP54750 535 aa11.93□□□□□ -0.5
MSL3-202ENST00000337339 ST18O60284 1047 aa11.92□□□□□ -0.5
MSL3-202ENST00000337339 MCTP1Q6DN14 999 aa11.92□□□□□ -0.5
MSL3-202ENST00000337339 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
MSL3-202ENST00000337339 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms