RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SETQ01105 290 aaPredicted RBP19.05■□□□□ 0.64
NPHP3-201ENST00000337331 G3V3G9 751 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 DCAF8Q5TAQ9 597 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
NPHP3-201ENST00000337331 LRRCC1Q9C099 1032 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 NKTRP30414 1462 aaKnown RBP19.04■□□□□ 0.64
NPHP3-201ENST00000337331 CCT4P50991 539 aaKnown RBP19.04■□□□□ 0.64
NPHP3-201ENST00000337331 ZNF445P59923 1031 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 LEKR1Q6ZMV7 388 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
NPHP3-201ENST00000337331 WDR62O43379 1518 aa19.03■□□□□ 0.64
NPHP3-201ENST00000337331 ATP2B3Q16720 1220 aa19.03■□□□□ 0.64
NPHP3-201ENST00000337331 PDCP20941 246 aa19.03■□□□□ 0.64
NPHP3-201ENST00000337331 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
NPHP3-201ENST00000337331 AK7Q96M32 723 aa19.02■□□□□ 0.64
NPHP3-201ENST00000337331 NFE2L2Q16236 605 aa19.02■□□□□ 0.63
NPHP3-201ENST00000337331 C10orf67Q8IYJ2 551 aa19.02■□□□□ 0.63
NPHP3-201ENST00000337331 PTPN23Q9H3S7 1636 aa19.02■□□□□ 0.63
NPHP3-201ENST00000337331 GABPB1Q06547 395 aaPredicted RBP19.01■□□□□ 0.63
NPHP3-201ENST00000337331 VPS53Q5VIR6 699 aa19.01■□□□□ 0.63
NPHP3-201ENST00000337331 PIBF1Q8WXW3 757 aa19.01■□□□□ 0.63
NPHP3-201ENST00000337331 SRCIN1Q9C0H9 1055 aa19.01■□□□□ 0.63
NPHP3-201ENST00000337331 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
NPHP3-201ENST00000337331 CCDC192P0DO97 292 aa19.01■□□□□ 0.63
NPHP3-201ENST00000337331 ZBTB9Q96C00 473 aa19.01■□□□□ 0.63
NPHP3-201ENST00000337331 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
NPHP3-201ENST00000337331 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
NPHP3-201ENST00000337331 IL1RAPL2Q9NP60 686 aa19■□□□□ 0.63
NPHP3-201ENST00000337331 PLEKHO1Q53GL0 409 aaPredicted RBP19■□□□□ 0.63
NPHP3-201ENST00000337331 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
NPHP3-201ENST00000337331 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
NPHP3-201ENST00000337331 PLEKHH1Q9ULM0 1364 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 SAFBQ15424 915 aaKnown RBP eCLIP18.99■□□□□ 0.63
NPHP3-201ENST00000337331 FILIP1Q7Z7B0 1213 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 SLC26A8Q96RN1 970 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 IPO7O95373 1038 aaKnown RBP18.99■□□□□ 0.63
NPHP3-201ENST00000337331 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 VPS37DQ86XT2 251 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 CAMSAP2Q08AD1 1489 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 RLBP1P12271 317 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 PTPN14Q15678 1187 aa18.99■□□□□ 0.63
NPHP3-201ENST00000337331 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
NPHP3-201ENST00000337331 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
NPHP3-201ENST00000337331 MAP4K4O95819 1239 aaPredicted RBP18.98■□□□□ 0.63
NPHP3-201ENST00000337331 EXOC6BQ9Y2D4 811 aa18.98■□□□□ 0.63
NPHP3-201ENST00000337331 ESCO1Q5FWF5 840 aa18.98■□□□□ 0.63
NPHP3-201ENST00000337331 TRMT1Q9NXH9 659 aaKnown RBP18.98■□□□□ 0.63
NPHP3-201ENST00000337331 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 ERICH2A1L162 156 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 ANKRD20A12PQ8NF67 263 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 FMNL2Q96PY5 1086 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 SRGAP3O43295 1099 aa18.97■□□□□ 0.63
NPHP3-201ENST00000337331 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 TMCO3Q6UWJ1 677 aa18.96■□□□□ 0.63
NPHP3-201ENST00000337331 SIL1Q9H173 461 aa18.96■□□□□ 0.63
NPHP3-201ENST00000337331 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
NPHP3-201ENST00000337331 ADGRF5Q8IZF2 1346 aa18.96■□□□□ 0.63
NPHP3-201ENST00000337331 KINO60870 393 aaKnown RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 CEBPZQ03701 1054 aaKnown RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 ZNF530Q6P9A1 599 aaPredicted RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 PCMTD1Q96MG8 357 aaPredicted RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
NPHP3-201ENST00000337331 ATF3P18847 181 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 CCDC183Q5T5S1 534 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 ERC1Q8IUD2 1116 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 GPRASP1Q5JY77 1395 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 HIP1O00291 1037 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 KDM4AO75164 1064 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 BMS1Q14692 1282 aaKnown RBP18.95■□□□□ 0.62
NPHP3-201ENST00000337331 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
NPHP3-201ENST00000337331 UBXN4Q92575 508 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 RASSF4Q9H2L5 321 aa18.95■□□□□ 0.62
NPHP3-201ENST00000337331 UVSSAQ2YD98 709 aa18.94■□□□□ 0.62
NPHP3-201ENST00000337331 HSP90B2PQ58FF3 399 aa18.94■□□□□ 0.62
NPHP3-201ENST00000337331 ATP2B1P20020 1258 aa18.94■□□□□ 0.62
NPHP3-201ENST00000337331 LMBRD1Q9NUN5 540 aa18.94■□□□□ 0.62
NPHP3-201ENST00000337331 RSPH14Q9UHP6 348 aa18.94■□□□□ 0.62
NPHP3-201ENST00000337331 NAT10Q9H0A0 1025 aaKnown RBP18.94■□□□□ 0.62
NPHP3-201ENST00000337331 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
NPHP3-201ENST00000337331 DHX16O60231 1041 aaKnown RBP18.93■□□□□ 0.62
NPHP3-201ENST00000337331 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
NPHP3-201ENST00000337331 STK3Q13188 491 aa18.93■□□□□ 0.62
NPHP3-201ENST00000337331 GTF3C6Q969F1 213 aa18.93■□□□□ 0.62
NPHP3-201ENST00000337331 CAMK4Q16566 473 aa18.93■□□□□ 0.62
NPHP3-201ENST00000337331 MCM10Q7L590 875 aa18.93■□□□□ 0.62
NPHP3-201ENST00000337331 UPF3BQ9BZI7 483 aaKnown RBP18.93■□□□□ 0.62
NPHP3-201ENST00000337331 RAD21O60216 631 aa18.92■□□□□ 0.62
NPHP3-201ENST00000337331 TRIM27P14373 513 aa18.92■□□□□ 0.62
NPHP3-201ENST00000337331 CCDC186Q7Z3E2 898 aa18.92■□□□□ 0.62
NPHP3-201ENST00000337331 KIF18AQ8NI77 898 aa18.92■□□□□ 0.62
NPHP3-201ENST00000337331 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
NPHP3-201ENST00000337331 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
NPHP3-201ENST00000337331 GIMAP6Q6P9H5 292 aa18.92■□□□□ 0.62
NPHP3-201ENST00000337331 AMOTL1Q8IY63 956 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms