RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RSPH6AQ9H0K4 717 aa18.76■□□□□ 0.59
APOBEC3B-202ENST00000335760 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 EXOC5O00471 708 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 FCHSD2O94868 740 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 DDB1Q16531 1140 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 LRRC37A3O60309 1634 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
APOBEC3B-202ENST00000335760 ZCRB1Q8TBF4 217 aaKnown RBP18.74■□□□□ 0.59
APOBEC3B-202ENST00000335760 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
APOBEC3B-202ENST00000335760 TNS2Q63HR2 1409 aa18.73■□□□□ 0.59
APOBEC3B-202ENST00000335760 BRWD3Q6RI45 1802 aa18.72■□□□□ 0.59
APOBEC3B-202ENST00000335760 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
APOBEC3B-202ENST00000335760 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
APOBEC3B-202ENST00000335760 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
APOBEC3B-202ENST00000335760 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
APOBEC3B-202ENST00000335760 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 AMOTQ4VCS5 1084 aa18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 PLEKHG2Q9H7P9 1386 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 NEFMP07197 916 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 MARCH10Q8NA82 808 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 CYP27B1O15528 508 aa18.66■□□□□ 0.58
APOBEC3B-202ENST00000335760 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
APOBEC3B-202ENST00000335760 RUNDC1Q96C34 613 aa18.66■□□□□ 0.58
APOBEC3B-202ENST00000335760 PHKG2P15735 406 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
APOBEC3B-202ENST00000335760 NFE2L2Q16236 605 aa18.61■□□□□ 0.57
APOBEC3B-202ENST00000335760 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
APOBEC3B-202ENST00000335760 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
APOBEC3B-202ENST00000335760 NKX1-1Q15270 411 aaPredicted RBP18.6■□□□□ 0.57
APOBEC3B-202ENST00000335760 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
APOBEC3B-202ENST00000335760 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 APAF1O14727 1248 aa18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.57
APOBEC3B-202ENST00000335760 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.57
APOBEC3B-202ENST00000335760 RIPK4P57078 832 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 DCAF5Q96JK2 942 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 BCL9O00512 1426 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 DOT1LQ8TEK3 1739 aa18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 SBF2Q86WG5 1849 aa18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 TOGARAM1Q9Y4F4 1720 aa18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 KCNQ2O43526 872 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 TRIM37O94972 964 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 MCM10Q7L590 875 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 NHSQ6T4R5 1651 aa18.52■□□□□ 0.56
APOBEC3B-202ENST00000335760 ADAMTS7Q9UKP4 1686 aa18.52■□□□□ 0.56
APOBEC3B-202ENST00000335760 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.55
APOBEC3B-202ENST00000335760 CABP4P57796 275 aa18.52■□□□□ 0.55
APOBEC3B-202ENST00000335760 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.55
APOBEC3B-202ENST00000335760 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
APOBEC3B-202ENST00000335760 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
APOBEC3B-202ENST00000335760 ITGB4P16144 1822 aa18.51■□□□□ 0.55
APOBEC3B-202ENST00000335760 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 TEFQ10587 303 aa18.49■□□□□ 0.55
APOBEC3B-202ENST00000335760 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
APOBEC3B-202ENST00000335760 EP400Q96L91 3159 aa18.49■□□□□ 0.55
APOBEC3B-202ENST00000335760 PIGBQ92521 554 aa18.48■□□□□ 0.55
APOBEC3B-202ENST00000335760 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
APOBEC3B-202ENST00000335760 MRC1P22897 1456 aa18.48■□□□□ 0.55
APOBEC3B-202ENST00000335760 BTAF1O14981 1849 aa18.46■□□□□ 0.55
APOBEC3B-202ENST00000335760 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
APOBEC3B-202ENST00000335760 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms