RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 CTAGE5O15320 804 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 KIF5BP33176 963 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 DMTNQ08495 405 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 DESP17661 470 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 KIF21BO75037 1637 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 HIP1O00291 1037 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 SYCE3A1L190 88 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 ERC2O15083 957 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.485e-7■■□□□ 11.6
SPTBN1-201ENST00000333896 ZBTB17Q13105 803 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 CEP83Q9Y592 693 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 ZFYP08048 801 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 KLHL40Q2TBA0 621 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 ARHGAP29Q52LW3 1261 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 MLECQ14165 292 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 C6orf163Q5TEZ5 329 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 NUP62CLQ9H1M0 184 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 EFCC1Q9HA90 598 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 ATP2B1P20020 1258 aa12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.488e-7■■■□□ 15.4
SPTBN1-201ENST00000333896 NAP1L3Q99457 506 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-201ENST00000333896 IFFO1Q0D2I5 559 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 DZIP1Q86YF9 867 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 KIF1CO43896 1103 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 NSRP1Q9H0G5 558 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 GCC1Q96CN9 775 aa12.03□□□□□ -0.48
SPTBN1-201ENST00000333896 PPP1R1BQ9UD71 204 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-201ENST00000333896 EPB41L2O43491 1005 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-201ENST00000333896 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.498e-13■■□□□ 13.3
SPTBN1-201ENST00000333896 CCDC150Q8NCX0 1101 aa12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 FIBPO43427 364 aa12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 NACADO15069 1562 aa12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 NAA15Q9BXJ9 866 aaKnown RBP12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 CAPN2P17655 700 aa12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 CTCFLQ8NI51 663 aaPredicted RBP12.02□□□□□ -0.49
SPTBN1-201ENST00000333896 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-201ENST00000333896 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.493e-6■■■■■ 27.8
SPTBN1-201ENST00000333896 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
SPTBN1-201ENST00000333896 API5Q9BZZ5 524 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-201ENST00000333896 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
SPTBN1-201ENST00000333896 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
SPTBN1-201ENST00000333896 OTUD6BQ8N6M0 293 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 TAF4BQ92750 862 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 ARHGAP25P42331 645 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
SPTBN1-201ENST00000333896 MICALL1Q8N3F8 863 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
SPTBN1-201ENST00000333896 TACO1Q9BSH4 297 aaKnown RBP12□□□□□ -0.49
SPTBN1-201ENST00000333896 SART3Q15020 963 aaKnown RBP12□□□□□ -0.49
SPTBN1-201ENST00000333896 MPHOSPH9Q99550 1183 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 FAM184BQ9ULE4 1060 aa12□□□□□ -0.49
SPTBN1-201ENST00000333896 MYO10Q9HD67 2058 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 C10orf67Q8IYJ2 551 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 GSTTP1A0A1W2PQM5 241 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 NAA25Q14CX7 972 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 NOLC1Q14978 699 aaKnown RBP eCLIP11.99□□□□□ -0.492e-10■□□□□ 9.1
SPTBN1-201ENST00000333896 SUPT6HQ7KZ85 1726 aaKnown RBP11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 USH1CQ9Y6N9 552 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 OPA1O60313 960 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 FOXD1Q16676 465 aa11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 SPATS2LQ9NUQ6 558 aaKnown RBP11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 SPATS2Q86XZ4 545 aaKnown RBP11.99□□□□□ -0.49
SPTBN1-201ENST00000333896 NBPF11Q86T75 865 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 STK38Q15208 465 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 DDX12PQ92771 950 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 XRCC6P12956 609 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 CCDC178Q5BJE1 867 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 ZMAT2Q96NC0 199 aaKnown RBP11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 EIF5P55010 431 aaKnown RBP11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 RSPH14Q9UHP6 348 aa11.98□□□□□ -0.49
SPTBN1-201ENST00000333896 ME1P48163 572 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 STMN4Q9H169 189 aaPredicted RBP11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 RAI14Q9P0K7 980 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 PIP4K2BP78356 416 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 RPAINQ86UA6 219 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms