RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 DISP2A7MBM2 1401 aa24.78■■□□□ 1.56
TSSC4-201ENST00000333256 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
TSSC4-201ENST00000333256 MAPK8IP3Q9UPT6 1336 aa24.77■■□□□ 1.56
TSSC4-201ENST00000333256 OVOS2A0A0G2JMS6 1433 aa24.76■■□□□ 1.55
TSSC4-201ENST00000333256 PNNQ9H307 717 aaKnown RBP24.76■■□□□ 1.55
TSSC4-201ENST00000333256 RBM6P78332 1123 aaKnown RBP24.75■■□□□ 1.55
TSSC4-201ENST00000333256 NEFMP07197 916 aa24.75■■□□□ 1.55
TSSC4-201ENST00000333256 MTHFSDQ2M296 383 aaKnown RBP24.75■■□□□ 1.55
TSSC4-201ENST00000333256 RRP7AQ9Y3A4 280 aaKnown RBP24.74■■□□□ 1.55
TSSC4-201ENST00000333256 APAF1O14727 1248 aa24.73■■□□□ 1.55
TSSC4-201ENST00000333256 RXRBP28702 533 aa24.73■■□□□ 1.55
TSSC4-201ENST00000333256 PLEKHO1Q53GL0 409 aaPredicted RBP24.73■■□□□ 1.55
TSSC4-201ENST00000333256 ZCRB1Q8TBF4 217 aaKnown RBP24.73■■□□□ 1.55
TSSC4-201ENST00000333256 CDCA7Q9BWT1 371 aaPredicted RBP24.73■■□□□ 1.55
TSSC4-201ENST00000333256 NEUROD2Q15784 382 aa24.72■■□□□ 1.55
TSSC4-201ENST00000333256 WNK3Q9BYP7 1800 aa24.72■■□□□ 1.55
TSSC4-201ENST00000333256 PARP4Q9UKK3 1724 aaKnown RBP24.72■■□□□ 1.55
TSSC4-201ENST00000333256 DDB1Q16531 1140 aa24.72■■□□□ 1.55
TSSC4-201ENST00000333256 EXOC5O00471 708 aa24.71■■□□□ 1.55
TSSC4-201ENST00000333256 AMOTQ4VCS5 1084 aa24.71■■□□□ 1.55
TSSC4-201ENST00000333256 ZNF530Q6P9A1 599 aaPredicted RBP24.71■■□□□ 1.55
TSSC4-201ENST00000333256 SEPT12Q8IYM1 358 aa24.71■■□□□ 1.55
TSSC4-201ENST00000333256 DDX54Q8TDD1 881 aaKnown RBP24.71■■□□□ 1.55
TSSC4-201ENST00000333256 SPG7Q9UQ90 795 aa24.71■■□□□ 1.55
TSSC4-201ENST00000333256 ONECUT3O60422 494 aaPredicted RBP24.7■■□□□ 1.54
TSSC4-201ENST00000333256 SALL2Q9Y467 1007 aaPredicted RBP24.7■■□□□ 1.54
TSSC4-201ENST00000333256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.69■■□□□ 1.54
TSSC4-201ENST00000333256 THSD7AQ9UPZ6 1657 aa24.68■■□□□ 1.54
TSSC4-201ENST00000333256 LRRC37A3O60309 1634 aa24.68■■□□□ 1.54
TSSC4-201ENST00000333256 CYP27B1O15528 508 aa24.68■■□□□ 1.54
TSSC4-201ENST00000333256 TMPOP42166 694 aaKnown RBP24.68■■□□□ 1.54
TSSC4-201ENST00000333256 NFE2L2Q16236 605 aa24.68■■□□□ 1.54
TSSC4-201ENST00000333256 GAS2L2Q8NHY3 880 aa24.68■■□□□ 1.54
TSSC4-201ENST00000333256 TNS2Q63HR2 1409 aa24.68■■□□□ 1.54
TSSC4-201ENST00000333256 PKD1L3Q7Z443 1732 aa24.67■■□□□ 1.54
TSSC4-201ENST00000333256 PCDH11XQ9BZA7 1347 aa24.66■■□□□ 1.54
TSSC4-201ENST00000333256 PCDH11YQ9BZA8 1340 aa24.66■■□□□ 1.54
TSSC4-201ENST00000333256 RIPK4P57078 832 aa24.66■■□□□ 1.54
TSSC4-201ENST00000333256 C1orf141Q5JVX7 400 aa24.65■■□□□ 1.54
TSSC4-201ENST00000333256 PLEKHG2Q9H7P9 1386 aa24.64■■□□□ 1.54
TSSC4-201ENST00000333256 PHKG2P15735 406 aa24.64■■□□□ 1.53
TSSC4-201ENST00000333256 YTHDC1Q96MU7 727 aaKnown RBP24.64■■□□□ 1.53
TSSC4-201ENST00000333256 RGS12O14924 1447 aa24.63■■□□□ 1.53
TSSC4-201ENST00000333256 HNRNPUQ00839 825 aaKnown RBP eCLIP24.63■■□□□ 1.53
TSSC4-201ENST00000333256 PDE3BQ13370 1112 aa24.63■■□□□ 1.53
TSSC4-201ENST00000333256 FAM182BQ5T319 152 aa24.63■■□□□ 1.53
TSSC4-201ENST00000333256 IFNL2Q8IZJ0 200 aa24.63■■□□□ 1.53
TSSC4-201ENST00000333256 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
TSSC4-201ENST00000333256 SHANK3Q9BYB0 1731 aa24.63■■□□□ 1.53
TSSC4-201ENST00000333256 DCTN1Q14203 1278 aa24.62■■□□□ 1.53
TSSC4-201ENST00000333256 AKAP4Q5JQC9 854 aa24.62■■□□□ 1.53
TSSC4-201ENST00000333256 MPRIPQ6WCQ1 1025 aa24.62■■□□□ 1.53
TSSC4-201ENST00000333256 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
TSSC4-201ENST00000333256 GNAT3A8MTJ3 354 aa24.61■■□□□ 1.53
TSSC4-201ENST00000333256 MCM10Q7L590 875 aa24.59■■□□□ 1.53
TSSC4-201ENST00000333256 THUMPD2Q9BTF0 503 aaKnown RBP24.59■■□□□ 1.53
TSSC4-201ENST00000333256 TRIM35Q9UPQ4 493 aa24.59■■□□□ 1.53
TSSC4-201ENST00000333256 LGR6Q9HBX8 967 aa24.58■■□□□ 1.53
TSSC4-201ENST00000333256 KRT27Q7Z3Y8 459 aa24.57■■□□□ 1.52
TSSC4-201ENST00000333256 RTF1Q92541 710 aaKnown RBP24.57■■□□□ 1.52
TSSC4-201ENST00000333256 IL17REQ8NFR9 667 aa24.56■■□□□ 1.52
TSSC4-201ENST00000333256 DLG5Q8TDM6 1919 aa24.56■■□□□ 1.52
TSSC4-201ENST00000333256 KDM6AO15550 1401 aaPredicted RBP24.56■■□□□ 1.52
TSSC4-201ENST00000333256 BRWD3Q6RI45 1802 aa24.55■■□□□ 1.52
TSSC4-201ENST00000333256 RNMTO43148 476 aaKnown RBP24.54■■□□□ 1.52
TSSC4-201ENST00000333256 NKX1-1Q15270 411 aaPredicted RBP24.54■■□□□ 1.52
TSSC4-201ENST00000333256 DCAF5Q96JK2 942 aa24.54■■□□□ 1.52
TSSC4-201ENST00000333256 WWC1Q8IX03 1113 aa24.53■■□□□ 1.52
TSSC4-201ENST00000333256 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
TSSC4-201ENST00000333256 LMOD3Q0VAK6 560 aa24.53■■□□□ 1.52
TSSC4-201ENST00000333256 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
TSSC4-201ENST00000333256 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
TSSC4-201ENST00000333256 CCDC27Q2M243 656 aa24.5■■□□□ 1.51
TSSC4-201ENST00000333256 EP400Q96L91 3159 aa24.49■■□□□ 1.51
TSSC4-201ENST00000333256 CEMIPQ8WUJ3 1361 aa24.49■■□□□ 1.51
TSSC4-201ENST00000333256 SYTL4Q96C24 671 aaPredicted RBP24.49■■□□□ 1.51
TSSC4-201ENST00000333256 NGEFQ8N5V2 710 aa24.48■■□□□ 1.51
TSSC4-201ENST00000333256 TEFQ10587 303 aa24.47■■□□□ 1.51
TSSC4-201ENST00000333256 TOGARAM1Q9Y4F4 1720 aa24.47■■□□□ 1.51
TSSC4-201ENST00000333256 KCNQ2O43526 872 aa24.46■■□□□ 1.51
TSSC4-201ENST00000333256 PRIM1P49642 420 aaKnown RBP24.46■■□□□ 1.51
TSSC4-201ENST00000333256 NCBP3Q53F19 620 aaKnown RBP24.46■■□□□ 1.51
TSSC4-201ENST00000333256 NFATC2IPQ8NCF5 419 aa24.46■■□□□ 1.51
TSSC4-201ENST00000333256 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
TSSC4-201ENST00000333256 CABP4P57796 275 aa24.46■■□□□ 1.51
TSSC4-201ENST00000333256 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
TSSC4-201ENST00000333256 LAS1LQ9Y4W2 734 aaKnown RBP24.46■■□□□ 1.51
TSSC4-201ENST00000333256 ADAMTS7Q9UKP4 1686 aa24.45■■□□□ 1.5
TSSC4-201ENST00000333256 SCN11AQ9UI33 1791 aa24.45■■□□□ 1.5
TSSC4-201ENST00000333256 DOT1LQ8TEK3 1739 aa24.45■■□□□ 1.5
TSSC4-201ENST00000333256 ERVV-2B6SEH9 535 aa24.44■■□□□ 1.5
TSSC4-201ENST00000333256 FAM196AQ6ZSG2 479 aa24.44■■□□□ 1.5
TSSC4-201ENST00000333256 PTF1AQ7RTS3 328 aa24.44■■□□□ 1.5
TSSC4-201ENST00000333256 MIS18AQ9NYP9 233 aa24.44■■□□□ 1.5
TSSC4-201ENST00000333256 ZBED9Q6R2W3 1325 aa24.44■■□□□ 1.5
TSSC4-201ENST00000333256 SPINK5Q9NQ38 1064 aaPredicted RBP24.43■■□□□ 1.5
TSSC4-201ENST00000333256 TMOD3Q9NYL9 352 aa24.43■■□□□ 1.5
TSSC4-201ENST00000333256 VIRMAQ69YN4 1812 aaKnown RBP24.41■■□□□ 1.5
TSSC4-201ENST00000333256 WDR63Q8IWG1 891 aa24.41■■□□□ 1.5
TSSC4-201ENST00000333256 PIGBQ92521 554 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms