RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 DDX11L8A8MPP1 907 aa17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 REREQ9P2R6 1566 aa17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-201ENST00000328560 G2E3Q7L622 706 aa17.4■□□□□ 0.38
ATP2C1-201ENST00000328560 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
ATP2C1-201ENST00000328560 LTV1Q96GA3 475 aaPredicted RBP17.4■□□□□ 0.38
ATP2C1-201ENST00000328560 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
ATP2C1-201ENST00000328560 THEMISQ8N1K5 641 aaPredicted RBP17.39■□□□□ 0.37
ATP2C1-201ENST00000328560 GBP4Q96PP9 640 aa17.39■□□□□ 0.37
ATP2C1-201ENST00000328560 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
ATP2C1-201ENST00000328560 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
ATP2C1-201ENST00000328560 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
ATP2C1-201ENST00000328560 MSH6P52701 1360 aa17.38■□□□□ 0.37
ATP2C1-201ENST00000328560 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
ATP2C1-201ENST00000328560 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
ATP2C1-201ENST00000328560 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-201ENST00000328560 SSFA2P28290 1259 aa17.37■□□□□ 0.37
ATP2C1-201ENST00000328560 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
ATP2C1-201ENST00000328560 SDSP20132 328 aa17.36■□□□□ 0.37
ATP2C1-201ENST00000328560 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
ATP2C1-201ENST00000328560 NLRP6P59044 892 aa17.35■□□□□ 0.37
ATP2C1-201ENST00000328560 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
ATP2C1-201ENST00000328560 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
ATP2C1-201ENST00000328560 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
ATP2C1-201ENST00000328560 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
ATP2C1-201ENST00000328560 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
ATP2C1-201ENST00000328560 DDIT3P35638 169 aa17.34■□□□□ 0.37
ATP2C1-201ENST00000328560 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
ATP2C1-201ENST00000328560 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.37
ATP2C1-201ENST00000328560 RTL1A6NKG5 1358 aa17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 EYA1Q99502 592 aa17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 RRAGDQ9NQL2 400 aaPredicted RBP17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 FSD2A1L4K1 749 aa17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 HMMRO75330 724 aa17.33■□□□□ 0.36
ATP2C1-201ENST00000328560 PTPRCP08575 1304 aa17.32■□□□□ 0.36
ATP2C1-201ENST00000328560 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
ATP2C1-201ENST00000328560 DLG5Q8TDM6 1919 aa17.32■□□□□ 0.36
ATP2C1-201ENST00000328560 USP6P35125 1406 aa17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 RABEP1Q15276 862 aa17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 USP26Q9BXU7 913 aa17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 GRPEL1Q9HAV7 217 aa17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 PLEKHG1Q9ULL1 1385 aa17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 SETD1AO15047 1707 aaKnown RBP17.31■□□□□ 0.36
ATP2C1-201ENST00000328560 GOLGA6L22H0YM25 854 aa17.3■□□□□ 0.36
ATP2C1-201ENST00000328560 MRE11P49959 708 aa17.3■□□□□ 0.36
ATP2C1-201ENST00000328560 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
ATP2C1-201ENST00000328560 TECPR2O15040 1411 aa17.3■□□□□ 0.36
ATP2C1-201ENST00000328560 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
ATP2C1-201ENST00000328560 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 FOXD4L5Q5VV16 416 aaPredicted RBP17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 FOXD4L4Q8WXT5 416 aaPredicted RBP17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 RGS12O14924 1447 aa17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
ATP2C1-201ENST00000328560 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
ATP2C1-201ENST00000328560 OVOS2A0A0J9YW53 1432 aa17.28■□□□□ 0.36
ATP2C1-201ENST00000328560 OVOS2Q6IE36 1432 aa17.28■□□□□ 0.36
ATP2C1-201ENST00000328560 GNAI2P04899 355 aa17.28■□□□□ 0.36
ATP2C1-201ENST00000328560 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
ATP2C1-201ENST00000328560 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
ATP2C1-201ENST00000328560 TRIM6-TRIM34B2RNG4 842 aa17.27■□□□□ 0.36
ATP2C1-201ENST00000328560 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.36
ATP2C1-201ENST00000328560 RILPL2Q969X0 211 aa17.27■□□□□ 0.36
ATP2C1-201ENST00000328560 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.36
ATP2C1-201ENST00000328560 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
ATP2C1-201ENST00000328560 ABTB2Q8N961 1025 aa17.27■□□□□ 0.35
ATP2C1-201ENST00000328560 CRB1P82279 1406 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 REC8O95072 547 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 FLIIQ13045 1269 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 ST18O60284 1047 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 PDE1AP54750 535 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 PKP1Q13835 747 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 FLT4P35916 1363 aa17.26■□□□□ 0.35
ATP2C1-201ENST00000328560 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
ATP2C1-201ENST00000328560 SKOR2Q2VWA4 1001 aaPredicted RBP17.25■□□□□ 0.35
ATP2C1-201ENST00000328560 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
ATP2C1-201ENST00000328560 ERC2O15083 957 aa17.25■□□□□ 0.35
ATP2C1-201ENST00000328560 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
ATP2C1-201ENST00000328560 MON2Q7Z3U7 1717 aa17.25■□□□□ 0.35
ATP2C1-201ENST00000328560 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 PTPRUQ92729 1446 aa17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 C3P01024 1663 aa17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
ATP2C1-201ENST00000328560 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 KCNA6P17658 529 aa17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 NEK4P51957 841 aa17.23■□□□□ 0.35
ATP2C1-201ENST00000328560 TRIM44Q96DX7 344 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms