RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TATP17735 454 aaPredicted RBP24.56■■□□□ 1.52
EXOSC3-201ENST00000327304 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
EXOSC3-201ENST00000327304 AFF2P51816 1311 aa24.55■■□□□ 1.52
EXOSC3-201ENST00000327304 USP21Q9UK80 565 aa24.55■■□□□ 1.52
EXOSC3-201ENST00000327304 TRIM35Q9UPQ4 493 aa24.55■■□□□ 1.52
EXOSC3-201ENST00000327304 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 SPATA31A1Q5TZJ5 1347 aa24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 RNF123Q5XPI4 1314 aa24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 CCDC27Q2M243 656 aa24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 WWC1Q8IX03 1113 aa24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 GAS2L2Q8NHY3 880 aa24.54■■□□□ 1.52
EXOSC3-201ENST00000327304 OVOS2A0A0G2JMS6 1433 aa24.53■■□□□ 1.52
EXOSC3-201ENST00000327304 PARP4Q9UKK3 1724 aaKnown RBP24.53■■□□□ 1.52
EXOSC3-201ENST00000327304 SPATA31A5Q5VU36 1347 aa24.53■■□□□ 1.52
EXOSC3-201ENST00000327304 SPATA31A7Q8IWB4 1347 aa24.53■■□□□ 1.52
EXOSC3-201ENST00000327304 PLEKHO1Q53GL0 409 aaPredicted RBP24.53■■□□□ 1.52
EXOSC3-201ENST00000327304 IL2RBP14784 551 aa24.51■■□□□ 1.51
EXOSC3-201ENST00000327304 VPS72Q15906 364 aa24.51■■□□□ 1.51
EXOSC3-201ENST00000327304 CCDC9Q9Y3X0 531 aaKnown RBP24.51■■□□□ 1.51
EXOSC3-201ENST00000327304 PKD1L3Q7Z443 1732 aa24.51■■□□□ 1.51
EXOSC3-201ENST00000327304 DISP2A7MBM2 1401 aa24.51■■□□□ 1.51
EXOSC3-201ENST00000327304 AMOTQ4VCS5 1084 aa24.51■■□□□ 1.51
EXOSC3-201ENST00000327304 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
EXOSC3-201ENST00000327304 ZNF530Q6P9A1 599 aaPredicted RBP24.5■■□□□ 1.51
EXOSC3-201ENST00000327304 PLEKHG2Q9H7P9 1386 aa24.5■■□□□ 1.51
EXOSC3-201ENST00000327304 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
EXOSC3-201ENST00000327304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.48■■□□□ 1.51
EXOSC3-201ENST00000327304 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
EXOSC3-201ENST00000327304 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
EXOSC3-201ENST00000327304 DCTN1Q14203 1278 aa24.47■■□□□ 1.51
EXOSC3-201ENST00000327304 THUMPD2Q9BTF0 503 aaKnown RBP24.47■■□□□ 1.51
EXOSC3-201ENST00000327304 SPG7Q9UQ90 795 aa24.47■■□□□ 1.51
EXOSC3-201ENST00000327304 LMOD3Q0VAK6 560 aa24.47■■□□□ 1.51
EXOSC3-201ENST00000327304 THRAP3Q9Y2W1 955 aaKnown RBP24.46■■□□□ 1.51
EXOSC3-201ENST00000327304 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 MCM10Q7L590 875 aa24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 ATRNO75882 1429 aa24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 SHANK3Q9BYB0 1731 aa24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 WDR63Q8IWG1 891 aa24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 ZCRB1Q8TBF4 217 aaKnown RBP24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 SPINK5Q9NQ38 1064 aaPredicted RBP24.45■■□□□ 1.5
EXOSC3-201ENST00000327304 AKAP4Q5JQC9 854 aa24.44■■□□□ 1.5
EXOSC3-201ENST00000327304 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
EXOSC3-201ENST00000327304 RCAN3Q9UKA8 241 aa24.43■■□□□ 1.5
EXOSC3-201ENST00000327304 CYP27B1O15528 508 aa24.42■■□□□ 1.5
EXOSC3-201ENST00000327304 BARGINQ6ZT62 677 aa24.42■■□□□ 1.5
EXOSC3-201ENST00000327304 RTF1Q92541 710 aaKnown RBP24.42■■□□□ 1.5
EXOSC3-201ENST00000327304 HTATSF1O43719 755 aaKnown RBP24.42■■□□□ 1.5
EXOSC3-201ENST00000327304 GLI3P10071 1580 aa24.42■■□□□ 1.5
EXOSC3-201ENST00000327304 PHKG2P15735 406 aa24.41■■□□□ 1.5
EXOSC3-201ENST00000327304 SLFN5Q08AF3 891 aa24.41■■□□□ 1.5
EXOSC3-201ENST00000327304 TRPC5Q9UL62 973 aaPredicted RBP24.41■■□□□ 1.5
EXOSC3-201ENST00000327304 PCDH11XQ9BZA7 1347 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 PCDH11YQ9BZA8 1340 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 IRX6P78412 446 aaPredicted RBP24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 FAM98CQ17RN3 349 aaKnown RBP24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 DUSP27Q5VZP5 1158 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 TRMT2AQ8IZ69 625 aaKnown RBP24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 IL17REQ8NFR9 667 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 CDCA7Q9BWT1 371 aaPredicted RBP24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 LRRC37A3O60309 1634 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 MPRIPQ6WCQ1 1025 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 IFNL2Q8IZJ0 200 aa24.4■■□□□ 1.5
EXOSC3-201ENST00000327304 GJD4Q96KN9 370 aaPredicted RBP24.39■■□□□ 1.49
EXOSC3-201ENST00000327304 TNS2Q63HR2 1409 aa24.38■■□□□ 1.49
EXOSC3-201ENST00000327304 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
EXOSC3-201ENST00000327304 LGR6Q9HBX8 967 aa24.38■■□□□ 1.49
EXOSC3-201ENST00000327304 IL16Q14005 1332 aa24.38■■□□□ 1.49
EXOSC3-201ENST00000327304 E9PSI1 815 aa24.38■■□□□ 1.49
EXOSC3-201ENST00000327304 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
EXOSC3-201ENST00000327304 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
EXOSC3-201ENST00000327304 KDM6AO15550 1401 aaPredicted RBP24.37■■□□□ 1.49
EXOSC3-201ENST00000327304 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
EXOSC3-201ENST00000327304 CEMIPQ8WUJ3 1361 aa24.36■■□□□ 1.49
EXOSC3-201ENST00000327304 CALD1Q05682 793 aaKnown RBP24.36■■□□□ 1.49
EXOSC3-201ENST00000327304 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
EXOSC3-201ENST00000327304 EXOC5O00471 708 aa24.35■■□□□ 1.49
EXOSC3-201ENST00000327304 RNMTO43148 476 aaKnown RBP24.35■■□□□ 1.49
EXOSC3-201ENST00000327304 THSD7AQ9UPZ6 1657 aa24.35■■□□□ 1.49
EXOSC3-201ENST00000327304 RRP1P56182 461 aaKnown RBP24.34■■□□□ 1.49
EXOSC3-201ENST00000327304 DDB1Q16531 1140 aa24.34■■□□□ 1.49
EXOSC3-201ENST00000327304 PPP4R2Q9NY27 417 aa24.34■■□□□ 1.49
EXOSC3-201ENST00000327304 LAS1LQ9Y4W2 734 aaKnown RBP24.34■■□□□ 1.49
EXOSC3-201ENST00000327304 SCN11AQ9UI33 1791 aa24.33■■□□□ 1.49
EXOSC3-201ENST00000327304 ZNF772Q68DY9 489 aaPredicted RBP24.33■■□□□ 1.49
EXOSC3-201ENST00000327304 ILDR1Q86SU0 546 aaPredicted RBP24.33■■□□□ 1.48
EXOSC3-201ENST00000327304 TSR2Q969E8 191 aaKnown RBP24.33■■□□□ 1.48
EXOSC3-201ENST00000327304 IFT57Q9NWB7 429 aa24.33■■□□□ 1.48
EXOSC3-201ENST00000327304 ZNF853P0CG23 659 aa24.32■■□□□ 1.48
EXOSC3-201ENST00000327304 HSP90AB1P08238 724 aaKnown RBP24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 DCAF5Q96JK2 942 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 MYH16Q9H6N6 1097 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 FANCIQ9NVI1 1328 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 A0A0G2JS52 829 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 GNAI1P63096 354 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 MYT1Q01538 1121 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 NKX1-1Q15270 411 aaPredicted RBP24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
EXOSC3-201ENST00000327304 MBIPQ9NS73 344 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms