RNA–Protein interactions for RNA: ENST00000325214.10

PCTP-202, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best) BASIC

Gene PCTP, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-202ENST00000325214 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
PCTP-202ENST00000325214 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
PCTP-202ENST00000325214 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
PCTP-202ENST00000325214 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
PCTP-202ENST00000325214 TRIM37O94972 964 aa17.03■□□□□ 0.32
PCTP-202ENST00000325214 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
PCTP-202ENST00000325214 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
PCTP-202ENST00000325214 CYP27B1O15528 508 aa17.02■□□□□ 0.32
PCTP-202ENST00000325214 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
PCTP-202ENST00000325214 DEFB132Q7Z7B7 95 aa17.01■□□□□ 0.31
PCTP-202ENST00000325214 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
PCTP-202ENST00000325214 RALBP1Q15311 655 aa17.01■□□□□ 0.31
PCTP-202ENST00000325214 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
PCTP-202ENST00000325214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCTP-202ENST00000325214 KCNQ2O43526 872 aa16.99■□□□□ 0.31
PCTP-202ENST00000325214 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
PCTP-202ENST00000325214 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
PCTP-202ENST00000325214 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
PCTP-202ENST00000325214 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
PCTP-202ENST00000325214 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
PCTP-202ENST00000325214 HMOX1P09601 288 aa16.97■□□□□ 0.31
PCTP-202ENST00000325214 BCL11BQ9C0K0 894 aaPredicted RBP16.97■□□□□ 0.31
PCTP-202ENST00000325214 TOGARAM1Q9Y4F4 1720 aa16.97■□□□□ 0.31
PCTP-202ENST00000325214 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
PCTP-202ENST00000325214 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
PCTP-202ENST00000325214 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
PCTP-202ENST00000325214 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
PCTP-202ENST00000325214 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
PCTP-202ENST00000325214 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
PCTP-202ENST00000325214 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
PCTP-202ENST00000325214 CAMKK2Q96RR4 588 aa16.95■□□□□ 0.3
PCTP-202ENST00000325214 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
PCTP-202ENST00000325214 APBA3O96018 575 aa16.95■□□□□ 0.3
PCTP-202ENST00000325214 PHKG2P15735 406 aa16.95■□□□□ 0.3
PCTP-202ENST00000325214 SF3B2Q13435 895 aaKnown RBP16.95■□□□□ 0.3
PCTP-202ENST00000325214 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
PCTP-202ENST00000325214 BTAF1O14981 1849 aa16.94■□□□□ 0.3
PCTP-202ENST00000325214 BAG6P46379 1132 aa16.93■□□□□ 0.3
PCTP-202ENST00000325214 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
PCTP-202ENST00000325214 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
PCTP-202ENST00000325214 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
PCTP-202ENST00000325214 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
PCTP-202ENST00000325214 PLSCR1O15162 318 aa16.92■□□□□ 0.3
PCTP-202ENST00000325214 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
PCTP-202ENST00000325214 AMOTQ4VCS5 1084 aa16.92■□□□□ 0.3
PCTP-202ENST00000325214 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
PCTP-202ENST00000325214 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
PCTP-202ENST00000325214 PROM2Q8N271 834 aa16.92■□□□□ 0.3
PCTP-202ENST00000325214 ITGB4P16144 1822 aa16.91■□□□□ 0.3
PCTP-202ENST00000325214 RREB1Q92766 1687 aa16.91■□□□□ 0.3
PCTP-202ENST00000325214 KDM6AO15550 1401 aaPredicted RBP16.9■□□□□ 0.3
PCTP-202ENST00000325214 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
PCTP-202ENST00000325214 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
PCTP-202ENST00000325214 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
PCTP-202ENST00000325214 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
PCTP-202ENST00000325214 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
PCTP-202ENST00000325214 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCTP-202ENST00000325214 NUP188Q5SRE5 1749 aa16.88■□□□□ 0.29
PCTP-202ENST00000325214 FCHSD2O94868 740 aa16.87■□□□□ 0.29
PCTP-202ENST00000325214 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
PCTP-202ENST00000325214 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
PCTP-202ENST00000325214 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
PCTP-202ENST00000325214 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
PCTP-202ENST00000325214 PIGBQ92521 554 aa16.86■□□□□ 0.29
PCTP-202ENST00000325214 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
PCTP-202ENST00000325214 PLEKHF1Q96S99 279 aa16.86■□□□□ 0.29
PCTP-202ENST00000325214 SCN11AQ9UI33 1791 aa16.86■□□□□ 0.29
PCTP-202ENST00000325214 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
PCTP-202ENST00000325214 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
PCTP-202ENST00000325214 LY75O60449 1722 aa16.85■□□□□ 0.29
PCTP-202ENST00000325214 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
PCTP-202ENST00000325214 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
PCTP-202ENST00000325214 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
PCTP-202ENST00000325214 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
PCTP-202ENST00000325214 ERVV-2B6SEH9 535 aa16.83■□□□□ 0.28
PCTP-202ENST00000325214 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
PCTP-202ENST00000325214 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
PCTP-202ENST00000325214 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
PCTP-202ENST00000325214 MRC1P22897 1456 aa16.81■□□□□ 0.28
PCTP-202ENST00000325214 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
PCTP-202ENST00000325214 GAS2L2Q8NHY3 880 aa16.8■□□□□ 0.28
PCTP-202ENST00000325214 ANP32CO43423 234 aa16.8■□□□□ 0.28
PCTP-202ENST00000325214 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
PCTP-202ENST00000325214 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
PCTP-202ENST00000325214 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
PCTP-202ENST00000325214 ASAP1Q9ULH1 1129 aa16.8■□□□□ 0.28
PCTP-202ENST00000325214 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
PCTP-202ENST00000325214 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
PCTP-202ENST00000325214 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
PCTP-202ENST00000325214 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
PCTP-202ENST00000325214 KCNQ4P56696 695 aa16.78■□□□□ 0.28
PCTP-202ENST00000325214 DLG5Q8TDM6 1919 aa16.78■□□□□ 0.28
PCTP-202ENST00000325214 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
PCTP-202ENST00000325214 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
PCTP-202ENST00000325214 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
PCTP-202ENST00000325214 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.27
PCTP-202ENST00000325214 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.27
PCTP-202ENST00000325214 CABP4P57796 275 aa16.76■□□□□ 0.27
PCTP-202ENST00000325214 SLC27A3Q5K4L6 730 aa16.76■□□□□ 0.27
PCTP-202ENST00000325214 SLC4A9Q96Q91 983 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms