RNA–Protein interactions for RNA: ENST00000325214.10

PCTP-202, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best) BASIC

Gene PCTP, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-202ENST00000325214 NISCHQ9Y2I1 1504 aa30.67■■■□□ 2.5
PCTP-202ENST00000325214 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
PCTP-202ENST00000325214 ABCC9O60706 1549 aa26.52■■□□□ 1.84
PCTP-202ENST00000325214 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
PCTP-202ENST00000325214 NACADO15069 1562 aa25.54■■□□□ 1.68
PCTP-202ENST00000325214 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
PCTP-202ENST00000325214 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
PCTP-202ENST00000325214 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.67
PCTP-202ENST00000325214 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
PCTP-202ENST00000325214 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
PCTP-202ENST00000325214 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
PCTP-202ENST00000325214 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
PCTP-202ENST00000325214 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
PCTP-202ENST00000325214 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
PCTP-202ENST00000325214 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
PCTP-202ENST00000325214 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
PCTP-202ENST00000325214 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
PCTP-202ENST00000325214 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
PCTP-202ENST00000325214 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
PCTP-202ENST00000325214 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
PCTP-202ENST00000325214 MROH2BQ7Z745 1585 aa23.66■■□□□ 1.38
PCTP-202ENST00000325214 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
PCTP-202ENST00000325214 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
PCTP-202ENST00000325214 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
PCTP-202ENST00000325214 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
PCTP-202ENST00000325214 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
PCTP-202ENST00000325214 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
PCTP-202ENST00000325214 WIZO95785 1651 aa23.4■■□□□ 1.34
PCTP-202ENST00000325214 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
PCTP-202ENST00000325214 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
PCTP-202ENST00000325214 NESP48681 1621 aa23.02■■□□□ 1.28
PCTP-202ENST00000325214 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
PCTP-202ENST00000325214 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
PCTP-202ENST00000325214 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
PCTP-202ENST00000325214 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
PCTP-202ENST00000325214 CFTRP13569 1480 aa22.81■■□□□ 1.24
PCTP-202ENST00000325214 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
PCTP-202ENST00000325214 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
PCTP-202ENST00000325214 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
PCTP-202ENST00000325214 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
PCTP-202ENST00000325214 FANCD2Q9BXW9 1451 aa22.62■■□□□ 1.21
PCTP-202ENST00000325214 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
PCTP-202ENST00000325214 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
PCTP-202ENST00000325214 CUX2O14529 1486 aa22.55■■□□□ 1.2
PCTP-202ENST00000325214 MRC2Q9UBG0 1479 aa22.52■■□□□ 1.2
PCTP-202ENST00000325214 WDR62O43379 1518 aa22.47■■□□□ 1.19
PCTP-202ENST00000325214 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
PCTP-202ENST00000325214 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
PCTP-202ENST00000325214 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
PCTP-202ENST00000325214 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
PCTP-202ENST00000325214 CUX1P39880 1505 aa22.18■■□□□ 1.14
PCTP-202ENST00000325214 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
PCTP-202ENST00000325214 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
PCTP-202ENST00000325214 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
PCTP-202ENST00000325214 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
PCTP-202ENST00000325214 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
PCTP-202ENST00000325214 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
PCTP-202ENST00000325214 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
PCTP-202ENST00000325214 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
PCTP-202ENST00000325214 TOP2BQ02880 1626 aa22■■□□□ 1.11
PCTP-202ENST00000325214 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
PCTP-202ENST00000325214 SOGA1O94964 1423 aa21.99■■□□□ 1.11
PCTP-202ENST00000325214 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
PCTP-202ENST00000325214 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.12e-6■□□□□ 9
PCTP-202ENST00000325214 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
PCTP-202ENST00000325214 TDRD9Q8NDG6 1382 aaKnown RBP21.88■■□□□ 1.09
PCTP-202ENST00000325214 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
PCTP-202ENST00000325214 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
PCTP-202ENST00000325214 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
PCTP-202ENST00000325214 GAPVD1Q14C86 1478 aa21.74■■□□□ 1.07
PCTP-202ENST00000325214 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
PCTP-202ENST00000325214 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
PCTP-202ENST00000325214 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
PCTP-202ENST00000325214 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
PCTP-202ENST00000325214 CHD1O14646 1710 aa21.63■■□□□ 1.05
PCTP-202ENST00000325214 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
PCTP-202ENST00000325214 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
PCTP-202ENST00000325214 SYNJ2O15056 1496 aa21.57■■□□□ 1.04
PCTP-202ENST00000325214 FBLN2P98095 1184 aa21.54■■□□□ 1.04
PCTP-202ENST00000325214 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
PCTP-202ENST00000325214 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
PCTP-202ENST00000325214 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
PCTP-202ENST00000325214 CHMP7Q8WUX9 453 aaPredicted RBP21.52■■□□□ 1.03
PCTP-202ENST00000325214 IGF1RP08069 1367 aa21.51■■□□□ 1.03
PCTP-202ENST00000325214 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
PCTP-202ENST00000325214 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
PCTP-202ENST00000325214 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
PCTP-202ENST00000325214 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
PCTP-202ENST00000325214 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
PCTP-202ENST00000325214 NUP160Q12769 1436 aa21.39■■□□□ 1.01
PCTP-202ENST00000325214 CUL7Q14999 1698 aa21.38■■□□□ 1.01
PCTP-202ENST00000325214 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
PCTP-202ENST00000325214 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
PCTP-202ENST00000325214 ARHGEF11O15085 1522 aa21.31■■□□□ 1
PCTP-202ENST00000325214 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
PCTP-202ENST00000325214 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
PCTP-202ENST00000325214 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
PCTP-202ENST00000325214 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
PCTP-202ENST00000325214 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
PCTP-202ENST00000325214 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms