RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 MTHFSDQ2M296 383 aaKnown RBP26.95■■□□□ 1.91
LIMS2-201ENST00000324938 EYA1Q99502 592 aa26.95■■□□□ 1.91
LIMS2-201ENST00000324938 ADAMTSL3P82987 1691 aa26.95■■□□□ 1.9
LIMS2-201ENST00000324938 LTN1O94822 1766 aa26.95■■□□□ 1.9
LIMS2-201ENST00000324938 C1orf115Q9H7X2 142 aa26.95■■□□□ 1.9
LIMS2-201ENST00000324938 KRT24Q2M2I5 525 aa26.94■■□□□ 1.9
LIMS2-201ENST00000324938 LNPKQ9C0E8 428 aa26.93■■□□□ 1.9
LIMS2-201ENST00000324938 INTS3Q68E01 1043 aaKnown RBP26.93■■□□□ 1.9
LIMS2-201ENST00000324938 ANKLE2Q86XL3 938 aa26.93■■□□□ 1.9
LIMS2-201ENST00000324938 GAS2L2Q8NHY3 880 aa26.92■■□□□ 1.9
LIMS2-201ENST00000324938 SETD1BQ9UPS6 1966 aaKnown RBP26.92■■□□□ 1.9
LIMS2-201ENST00000324938 SIRT2Q8IXJ6 389 aa26.92■■□□□ 1.9
LIMS2-201ENST00000324938 FOXO3O43524 673 aa26.91■■□□□ 1.9
LIMS2-201ENST00000324938 HOXC9P31274 260 aa26.91■■□□□ 1.9
LIMS2-201ENST00000324938 RTF1Q92541 710 aaKnown RBP26.91■■□□□ 1.9
LIMS2-201ENST00000324938 PTPRCP08575 1304 aa26.9■■□□□ 1.9
LIMS2-201ENST00000324938 NFKBIBQ15653 356 aa26.9■■□□□ 1.9
LIMS2-201ENST00000324938 RTL1A6NKG5 1358 aa26.89■■□□□ 1.9
LIMS2-201ENST00000324938 ABTB2Q8N961 1025 aa26.88■■□□□ 1.89
LIMS2-201ENST00000324938 ADGRL3Q9HAR2 1447 aa26.87■■□□□ 1.89
LIMS2-201ENST00000324938 HTATSF1O43719 755 aaKnown RBP26.87■■□□□ 1.89
LIMS2-201ENST00000324938 ANKRD45Q5TZF3 282 aa26.87■■□□□ 1.89
LIMS2-201ENST00000324938 PHF8Q9UPP1 1060 aa26.87■■□□□ 1.89
LIMS2-201ENST00000324938 FAM208AQ9UK61 1670 aaKnown RBP26.86■■□□□ 1.89
LIMS2-201ENST00000324938 NUTM2GQ5VZR2 741 aa26.86■■□□□ 1.89
LIMS2-201ENST00000324938 BMP2KLQ5H9B9 411 aa26.86■■□□□ 1.89
LIMS2-201ENST00000324938 TSPYL4Q9UJ04 414 aa26.86■■□□□ 1.89
LIMS2-201ENST00000324938 C22orf23Q9BZE7 217 aa26.85■■□□□ 1.89
LIMS2-201ENST00000324938 NFAT5O94916 1531 aa26.85■■□□□ 1.89
LIMS2-201ENST00000324938 ATP10DQ9P241 1426 aa26.85■■□□□ 1.89
LIMS2-201ENST00000324938 CACNA1FO60840 1977 aa26.85■■□□□ 1.89
LIMS2-201ENST00000324938 MFAP1P55081 439 aaKnown RBP26.84■■□□□ 1.89
LIMS2-201ENST00000324938 PHRF1Q9P1Y6 1649 aaKnown RBP26.83■■□□□ 1.89
LIMS2-201ENST00000324938 MSH6P52701 1360 aa26.83■■□□□ 1.89
LIMS2-201ENST00000324938 MIS18AQ9NYP9 233 aa26.83■■□□□ 1.88
LIMS2-201ENST00000324938 TBC1D2Q9BYX2 928 aa26.8■■□□□ 1.88
LIMS2-201ENST00000324938 GNAT3A8MTJ3 354 aa26.8■■□□□ 1.88
LIMS2-201ENST00000324938 SLC4A2P04920 1241 aa26.8■■□□□ 1.88
LIMS2-201ENST00000324938 MAP3K5Q99683 1374 aa26.79■■□□□ 1.88
LIMS2-201ENST00000324938 ANKRD44Q8N8A2 993 aa26.79■■□□□ 1.88
LIMS2-201ENST00000324938 DCTPP1Q9H773 170 aa26.79■■□□□ 1.88
LIMS2-201ENST00000324938 N4BP2Q86UW6 1770 aaPredicted RBP26.79■■□□□ 1.88
LIMS2-201ENST00000324938 NPHP4O75161 1426 aaPredicted RBP26.77■■□□□ 1.88
LIMS2-201ENST00000324938 RPAP2Q8IXW5 612 aaPredicted RBP26.77■■□□□ 1.88
LIMS2-201ENST00000324938 C14orf37Q86TY3 774 aa26.77■■□□□ 1.88
LIMS2-201ENST00000324938 CEP85Q6P2H3 762 aa26.75■■□□□ 1.87
LIMS2-201ENST00000324938 ANTXR1Q9H6X2 564 aa26.74■■□□□ 1.87
LIMS2-201ENST00000324938 RGPD2P0DJD1 1756 aa26.74■■□□□ 1.87
LIMS2-201ENST00000324938 SOS1Q07889 1333 aaPredicted RBP26.74■■□□□ 1.87
LIMS2-201ENST00000324938 RBM25P49756 843 aaKnown RBP26.74■■□□□ 1.87
LIMS2-201ENST00000324938 IP6K1Q92551 441 aa26.74■■□□□ 1.87
LIMS2-201ENST00000324938 LTV1Q96GA3 475 aaPredicted RBP26.74■■□□□ 1.87
LIMS2-201ENST00000324938 BABAM1Q9NWV8 329 aa26.74■■□□□ 1.87
LIMS2-201ENST00000324938 RBM33Q96EV2 1170 aaKnown RBP26.73■■□□□ 1.87
LIMS2-201ENST00000324938 G2E3Q7L622 706 aa26.72■■□□□ 1.87
LIMS2-201ENST00000324938 MEIS3Q99687 375 aa26.72■■□□□ 1.87
LIMS2-201ENST00000324938 FRAT2O75474 233 aaPredicted RBP26.72■■□□□ 1.87
LIMS2-201ENST00000324938 IL17REQ8NFR9 667 aa26.71■■□□□ 1.87
LIMS2-201ENST00000324938 SLKQ9H2G2 1235 aaPredicted RBP26.71■■□□□ 1.87
LIMS2-201ENST00000324938 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
LIMS2-201ENST00000324938 CCT4P50991 539 aaKnown RBP26.71■■□□□ 1.87
LIMS2-201ENST00000324938 ESCO1Q5FWF5 840 aa26.71■■□□□ 1.87
LIMS2-201ENST00000324938 STK31Q9BXU1 1019 aa26.71■■□□□ 1.87
LIMS2-201ENST00000324938 PSME1Q06323 249 aa26.7■■□□□ 1.86
LIMS2-201ENST00000324938 LMO7Q8WWI1 1683 aa26.7■■□□□ 1.86
LIMS2-201ENST00000324938 KCNH5Q8NCM2 988 aa26.69■■□□□ 1.86
LIMS2-201ENST00000324938 SLIT3O75094 1523 aa26.69■■□□□ 1.86
LIMS2-201ENST00000324938 CCDC30Q5VVM6 783 aa26.68■■□□□ 1.86
LIMS2-201ENST00000324938 PLEKHM2Q8IWE5 1019 aa26.68■■□□□ 1.86
LIMS2-201ENST00000324938 KDM3BQ7LBC6 1761 aa26.68■■□□□ 1.86
LIMS2-201ENST00000324938 TAF7Q15545 349 aaPredicted RBP26.68■■□□□ 1.86
LIMS2-201ENST00000324938 TRPM3Q9HCF6 1732 aaPredicted RBP26.68■■□□□ 1.86
LIMS2-201ENST00000324938 TBC1D9Q6ZT07 1266 aa26.67■■□□□ 1.86
LIMS2-201ENST00000324938 USHBP1Q8N6Y0 703 aa26.67■■□□□ 1.86
LIMS2-201ENST00000324938 CEMIPQ8WUJ3 1361 aa26.66■■□□□ 1.86
LIMS2-201ENST00000324938 F6X3S4 739 aa26.66■■□□□ 1.86
LIMS2-201ENST00000324938 PXDNLA1KZ92 1463 aa26.65■■□□□ 1.86
LIMS2-201ENST00000324938 CDC45O75419 566 aa26.65■■□□□ 1.86
LIMS2-201ENST00000324938 GSPT1P15170 499 aaKnown RBP26.65■■□□□ 1.86
LIMS2-201ENST00000324938 KIF1AQ12756 1690 aa26.64■■□□□ 1.86
LIMS2-201ENST00000324938 FLIIQ13045 1269 aa26.64■■□□□ 1.86
LIMS2-201ENST00000324938 SLC4A10Q6U841 1118 aa26.64■■□□□ 1.86
LIMS2-201ENST00000324938 NBPF6Q5VWK0 638 aa26.63■■□□□ 1.85
LIMS2-201ENST00000324938 NBPF4Q96M43 638 aa26.63■■□□□ 1.85
LIMS2-201ENST00000324938 HMMRO75330 724 aa26.63■■□□□ 1.85
LIMS2-201ENST00000324938 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
LIMS2-201ENST00000324938 GSE1Q14687 1217 aa26.62■■□□□ 1.85
LIMS2-201ENST00000324938 CAMTA1Q9Y6Y1 1673 aa26.62■■□□□ 1.85
LIMS2-201ENST00000324938 NCAPD2Q15021 1401 aa26.62■■□□□ 1.85
LIMS2-201ENST00000324938 HSCBQ8IWL3 235 aa26.62■■□□□ 1.85
LIMS2-201ENST00000324938 SNX21Q969T3 373 aa26.61■■□□□ 1.85
LIMS2-201ENST00000324938 NCOA3Q9Y6Q9 1424 aa26.6■■□□□ 1.85
LIMS2-201ENST00000324938 EIF5BO60841 1220 aaKnown RBP26.59■■□□□ 1.85
LIMS2-201ENST00000324938 FKBP5Q13451 457 aaPredicted RBP26.59■■□□□ 1.85
LIMS2-201ENST00000324938 ORAI2Q96SN7 254 aa26.59■■□□□ 1.85
LIMS2-201ENST00000324938 C16orf71Q8IYS4 520 aaPredicted RBP26.59■■□□□ 1.85
LIMS2-201ENST00000324938 GNAI2P04899 355 aa26.58■■□□□ 1.85
LIMS2-201ENST00000324938 KIF2CQ99661 725 aa26.57■■□□□ 1.84
LIMS2-201ENST00000324938 BCL11AQ9H165 835 aa26.57■■□□□ 1.84
LIMS2-201ENST00000324938 ARHGEF25Q86VW2 580 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms