RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 ZCRB1Q8TBF4 217 aaKnown RBP20.93■□□□□ 0.94
TSFM-201ENST00000323833 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
TSFM-201ENST00000323833 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
TSFM-201ENST00000323833 NHSQ6T4R5 1651 aa20.92■□□□□ 0.94
TSFM-201ENST00000323833 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
TSFM-201ENST00000323833 BCL9O00512 1426 aa20.91■□□□□ 0.94
TSFM-201ENST00000323833 IL13P35225 146 aa20.91■□□□□ 0.94
TSFM-201ENST00000323833 PTF1AQ7RTS3 328 aa20.9■□□□□ 0.94
TSFM-201ENST00000323833 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.94
TSFM-201ENST00000323833 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
TSFM-201ENST00000323833 BAG6P46379 1132 aa20.89■□□□□ 0.93
TSFM-201ENST00000323833 BTAF1O14981 1849 aa20.89■□□□□ 0.93
TSFM-201ENST00000323833 APBA3O96018 575 aa20.88■□□□□ 0.93
TSFM-201ENST00000323833 EN1Q05925 392 aaPredicted RBP20.88■□□□□ 0.93
TSFM-201ENST00000323833 ACSBG1Q96GR2 724 aa20.88■□□□□ 0.93
TSFM-201ENST00000323833 PARD3Q8TEW0 1356 aa20.87■□□□□ 0.93
TSFM-201ENST00000323833 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
TSFM-201ENST00000323833 DIAPH1O60610 1272 aaKnown RBP20.87■□□□□ 0.93
TSFM-201ENST00000323833 AEBP1Q8IUX7 1158 aa20.87■□□□□ 0.93
TSFM-201ENST00000323833 ITGB4P16144 1822 aa20.86■□□□□ 0.93
TSFM-201ENST00000323833 KCNQ2O43526 872 aa20.86■□□□□ 0.93
TSFM-201ENST00000323833 SULT6B1Q6IMI4 303 aa20.85■□□□□ 0.93
TSFM-201ENST00000323833 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
TSFM-201ENST00000323833 RREB1Q92766 1687 aa20.85■□□□□ 0.93
TSFM-201ENST00000323833 RGPD3A6NKT7 1758 aaPredicted RBP20.85■□□□□ 0.93
TSFM-201ENST00000323833 RGPD4Q7Z3J3 1758 aa20.85■□□□□ 0.93
TSFM-201ENST00000323833 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
TSFM-201ENST00000323833 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
TSFM-201ENST00000323833 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
TSFM-201ENST00000323833 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.93
TSFM-201ENST00000323833 CYP27B1O15528 508 aa20.83■□□□□ 0.93
TSFM-201ENST00000323833 EZH2Q15910 746 aaKnown RBP20.83■□□□□ 0.93
TSFM-201ENST00000323833 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
TSFM-201ENST00000323833 NUP188Q5SRE5 1749 aa20.82■□□□□ 0.92
TSFM-201ENST00000323833 HMOX1P09601 288 aa20.82■□□□□ 0.92
TSFM-201ENST00000323833 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
TSFM-201ENST00000323833 CAMKK2Q96RR4 588 aa20.82■□□□□ 0.92
TSFM-201ENST00000323833 KDRP35968 1356 aa20.82■□□□□ 0.92
TSFM-201ENST00000323833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.81■□□□□ 0.92
TSFM-201ENST00000323833 U2SURPO15042 1029 aaKnown RBP20.8■□□□□ 0.92
TSFM-201ENST00000323833 PRIM1P49642 420 aaKnown RBP20.79■□□□□ 0.92
TSFM-201ENST00000323833 SYTL4Q96C24 671 aaPredicted RBP20.79■□□□□ 0.92
TSFM-201ENST00000323833 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
TSFM-201ENST00000323833 RALBP1Q15311 655 aa20.78■□□□□ 0.92
TSFM-201ENST00000323833 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
TSFM-201ENST00000323833 PHKG2P15735 406 aa20.77■□□□□ 0.92
TSFM-201ENST00000323833 PLSCR1O15162 318 aa20.76■□□□□ 0.91
TSFM-201ENST00000323833 IFNL2Q8IZJ0 200 aa20.76■□□□□ 0.91
TSFM-201ENST00000323833 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
TSFM-201ENST00000323833 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
TSFM-201ENST00000323833 LY75O60449 1722 aa20.75■□□□□ 0.91
TSFM-201ENST00000323833 SCN11AQ9UI33 1791 aa20.74■□□□□ 0.91
TSFM-201ENST00000323833 ZNF530Q6P9A1 599 aaPredicted RBP20.74■□□□□ 0.91
TSFM-201ENST00000323833 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
TSFM-201ENST00000323833 PROM2Q8N271 834 aa20.72■□□□□ 0.91
TSFM-201ENST00000323833 PRKRIP1Q9H875 184 aaPredicted RBP20.71■□□□□ 0.91
TSFM-201ENST00000323833 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
TSFM-201ENST00000323833 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
TSFM-201ENST00000323833 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
TSFM-201ENST00000323833 TXNRD1Q16881 649 aa20.7■□□□□ 0.9
TSFM-201ENST00000323833 MPRIPQ6WCQ1 1025 aa20.7■□□□□ 0.9
TSFM-201ENST00000323833 C1orf141Q5JVX7 400 aa20.69■□□□□ 0.9
TSFM-201ENST00000323833 RSPH6AQ9H0K4 717 aa20.69■□□□□ 0.9
TSFM-201ENST00000323833 KDM6AO15550 1401 aaPredicted RBP20.69■□□□□ 0.9
TSFM-201ENST00000323833 MTHFSDQ2M296 383 aaKnown RBP20.68■□□□□ 0.9
TSFM-201ENST00000323833 HSP90AB1P08238 724 aaKnown RBP20.67■□□□□ 0.9
TSFM-201ENST00000323833 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
TSFM-201ENST00000323833 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
TSFM-201ENST00000323833 DLG5Q8TDM6 1919 aa20.66■□□□□ 0.9
TSFM-201ENST00000323833 PSDA5PKW4 1024 aaPredicted RBP20.66■□□□□ 0.9
TSFM-201ENST00000323833 PIGBQ92521 554 aa20.66■□□□□ 0.9
TSFM-201ENST00000323833 TAF1LQ8IZX4 1826 aa20.66■□□□□ 0.9
TSFM-201ENST00000323833 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
TSFM-201ENST00000323833 PHACTR3Q96KR7 559 aa20.65■□□□□ 0.9
TSFM-201ENST00000323833 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
TSFM-201ENST00000323833 PAPPAQ13219 1627 aa20.64■□□□□ 0.9
TSFM-201ENST00000323833 FCHSD2O94868 740 aa20.64■□□□□ 0.89
TSFM-201ENST00000323833 R3HDM1Q15032 1099 aaKnown RBP20.64■□□□□ 0.89
TSFM-201ENST00000323833 TMOD3Q9NYL9 352 aa20.64■□□□□ 0.89
TSFM-201ENST00000323833 ERVV-2B6SEH9 535 aa20.63■□□□□ 0.89
TSFM-201ENST00000323833 KCNQ4P56696 695 aa20.63■□□□□ 0.89
TSFM-201ENST00000323833 NBPF14Q5TI25 921 aa20.63■□□□□ 0.89
TSFM-201ENST00000323833 LRRC4BQ9NT99 713 aa20.63■□□□□ 0.89
TSFM-201ENST00000323833 LGR6Q9HBX8 967 aa20.62■□□□□ 0.89
TSFM-201ENST00000323833 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
TSFM-201ENST00000323833 C5P01031 1676 aa20.61■□□□□ 0.89
TSFM-201ENST00000323833 CABP4P57796 275 aa20.61■□□□□ 0.89
TSFM-201ENST00000323833 TUBGCP6Q96RT7 1819 aa20.61■□□□□ 0.89
TSFM-201ENST00000323833 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
TSFM-201ENST00000323833 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
TSFM-201ENST00000323833 ASAP1Q9ULH1 1129 aa20.6■□□□□ 0.89
TSFM-201ENST00000323833 SIPA1L3O60292 1781 aaPredicted RBP20.59■□□□□ 0.89
TSFM-201ENST00000323833 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
TSFM-201ENST00000323833 SLC27A3Q5K4L6 730 aa20.59■□□□□ 0.89
TSFM-201ENST00000323833 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
TSFM-201ENST00000323833 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
TSFM-201ENST00000323833 SMARCC1Q92922 1105 aaPredicted RBP20.58■□□□□ 0.89
TSFM-201ENST00000323833 ATG3Q9NT62 314 aa20.58■□□□□ 0.89
TSFM-201ENST00000323833 CCNL1Q9UK58 526 aaPredicted RBP20.58■□□□□ 0.89
TSFM-201ENST00000323833 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms