RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
IFT88-201ENST00000319980 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
IFT88-201ENST00000319980 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
IFT88-201ENST00000319980 HOXC9P31274 260 aa9.62□□□□□ -0.87
IFT88-201ENST00000319980 KRT24Q2M2I5 525 aa9.62□□□□□ -0.87
IFT88-201ENST00000319980 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
IFT88-201ENST00000319980 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
IFT88-201ENST00000319980 RTF1Q92541 710 aaKnown RBP9.61□□□□□ -0.87
IFT88-201ENST00000319980 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
IFT88-201ENST00000319980 CHL1O00533 1208 aa9.61□□□□□ -0.87
IFT88-201ENST00000319980 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
IFT88-201ENST00000319980 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
IFT88-201ENST00000319980 IGSF1Q8N6C5 1336 aa9.6□□□□□ -0.87
IFT88-201ENST00000319980 ARHGAP45Q92619 1136 aa9.6□□□□□ -0.87
IFT88-201ENST00000319980 ORAI2Q96SN7 254 aa9.6□□□□□ -0.87
IFT88-201ENST00000319980 NALCNQ8IZF0 1738 aa9.6□□□□□ -0.87
IFT88-201ENST00000319980 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
IFT88-201ENST00000319980 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
IFT88-201ENST00000319980 KDRP35968 1356 aa9.59□□□□□ -0.87
IFT88-201ENST00000319980 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
IFT88-201ENST00000319980 ADGRL3Q9HAR2 1447 aa9.59□□□□□ -0.87
IFT88-201ENST00000319980 PIK3C2AO00443 1686 aa9.59□□□□□ -0.87
IFT88-201ENST00000319980 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
IFT88-201ENST00000319980 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
IFT88-201ENST00000319980 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
IFT88-201ENST00000319980 LMOD2Q6P5Q4 547 aa9.58□□□□□ -0.88
IFT88-201ENST00000319980 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
IFT88-201ENST00000319980 USHBP1Q8N6Y0 703 aa9.58□□□□□ -0.88
IFT88-201ENST00000319980 FMN2Q9NZ56 1722 aa9.58□□□□□ -0.88
IFT88-201ENST00000319980 TSPYL4Q9UJ04 414 aa9.57□□□□□ -0.88
IFT88-201ENST00000319980 KIF24Q5T7B8 1368 aa9.57□□□□□ -0.88
IFT88-201ENST00000319980 API5Q9BZZ5 524 aaKnown RBP9.57□□□□□ -0.88
IFT88-201ENST00000319980 C1orf115Q9H7X2 142 aa9.57□□□□□ -0.88
IFT88-201ENST00000319980 MED1Q15648 1581 aaPredicted RBP9.57□□□□□ -0.88
IFT88-201ENST00000319980 CHMP4BQ9H444 224 aaKnown RBP9.57□□□□□ -0.88
IFT88-201ENST00000319980 CRB1P82279 1406 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 ABCC4O15439 1325 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 DLG5Q8TDM6 1919 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 IP6K1Q92551 441 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 GNAT3A8MTJ3 354 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 SEC24BO95487 1268 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 MYT1Q01538 1121 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 KCNH5Q8NCM2 988 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
IFT88-201ENST00000319980 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
IFT88-201ENST00000319980 KIAA0232Q92628 1395 aa9.55□□□□□ -0.88
IFT88-201ENST00000319980 SLC4A2P04920 1241 aa9.55□□□□□ -0.88
IFT88-201ENST00000319980 DCCP43146 1447 aa9.55□□□□□ -0.88
IFT88-201ENST00000319980 GCP02774 474 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 NBPF6Q5VWK0 638 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 NBPF4Q96M43 638 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 C19orf44Q9H6X5 657 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 TOM1O60784 492 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 NBR1Q14596 966 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 AHDC1Q5TGY3 1603 aaPredicted RBP9.54□□□□□ -0.88
IFT88-201ENST00000319980 HTATSF1O43719 755 aaKnown RBP9.54□□□□□ -0.88
IFT88-201ENST00000319980 SLC4A3P48751 1232 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 LNPKQ9C0E8 428 aa9.54□□□□□ -0.88
IFT88-201ENST00000319980 KRT28Q7Z3Y7 464 aa9.53□□□□□ -0.88
IFT88-201ENST00000319980 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
IFT88-201ENST00000319980 LRRC59Q96AG4 307 aaKnown RBP9.53□□□□□ -0.88
IFT88-201ENST00000319980 NUCB1Q02818 461 aa9.52□□□□□ -0.88
IFT88-201ENST00000319980 TMEM132AQ24JP5 1023 aa9.52□□□□□ -0.88
IFT88-201ENST00000319980 SIRT2Q8IXJ6 389 aa9.52□□□□□ -0.88
IFT88-201ENST00000319980 ROBO1Q9Y6N7 1651 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 INTS3Q68E01 1043 aaKnown RBP9.52□□□□□ -0.89
IFT88-201ENST00000319980 CHD1LQ86WJ1 897 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 USP19O94966 1318 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 PTPRCP08575 1304 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 ATF3P18847 181 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 ARHGEF25Q86VW2 580 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 MAP3K5Q99683 1374 aa9.52□□□□□ -0.89
IFT88-201ENST00000319980 TAF7Q15545 349 aaPredicted RBP9.51□□□□□ -0.89
IFT88-201ENST00000319980 G2E3Q7L622 706 aa9.51□□□□□ -0.89
IFT88-201ENST00000319980 SLC4A10Q6U841 1118 aa9.51□□□□□ -0.89
IFT88-201ENST00000319980 GCC1Q96CN9 775 aa9.51□□□□□ -0.89
IFT88-201ENST00000319980 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
IFT88-201ENST00000319980 NHSL1Q5SYE7 1610 aa9.51□□□□□ -0.89
IFT88-201ENST00000319980 F6X3S4 739 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 DDX17Q92841 729 aaKnown RBP9.5□□□□□ -0.89
IFT88-201ENST00000319980 STK31Q9BXU1 1019 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 MARF1Q9Y4F3 1742 aaKnown RBP9.5□□□□□ -0.89
IFT88-201ENST00000319980 COL16A1Q07092 1604 aaPredicted RBP9.5□□□□□ -0.89
IFT88-201ENST00000319980 UBAP1LF5GYI3 381 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 MSH6P52701 1360 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 TMEM94Q12767 1356 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 ZC3H6P61129 1189 aaKnown RBP9.5□□□□□ -0.89
IFT88-201ENST00000319980 LGR6Q9HBX8 967 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 NFAT5O94916 1531 aa9.5□□□□□ -0.89
IFT88-201ENST00000319980 C1orf167Q5SNV9 1468 aa9.49□□□□□ -0.89
IFT88-201ENST00000319980 RGS12O14924 1447 aa9.49□□□□□ -0.89
IFT88-201ENST00000319980 MEIS3Q99687 375 aa9.49□□□□□ -0.89
IFT88-201ENST00000319980 CCDC30Q5VVM6 783 aa9.49□□□□□ -0.89
IFT88-201ENST00000319980 ANKRD24Q8TF21 1146 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms