RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
NFX1-201ENST00000318524 MYH16Q9H6N6 1097 aa8.23□□□□□ -1.09
NFX1-201ENST00000318524 USP32Q8NFA0 1604 aa8.23□□□□□ -1.09
NFX1-201ENST00000318524 NINLQ9Y2I6 1382 aa8.23□□□□□ -1.09
NFX1-201ENST00000318524 LRRC7Q96NW7 1537 aa8.23□□□□□ -1.09
NFX1-201ENST00000318524 CDC42BPGQ6DT37 1551 aa8.22□□□□□ -1.09
NFX1-201ENST00000318524 GNAT3A8MTJ3 354 aa8.22□□□□□ -1.09
NFX1-201ENST00000318524 ZBTB22O15209 634 aa8.22□□□□□ -1.09
NFX1-201ENST00000318524 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
NFX1-201ENST00000318524 WWC3Q9ULE0 1092 aa8.22□□□□□ -1.09
NFX1-201ENST00000318524 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
NFX1-201ENST00000318524 RARSP54136 660 aaKnown RBP8.22□□□□□ -1.09
NFX1-201ENST00000318524 FKBP5Q13451 457 aaPredicted RBP8.22□□□□□ -1.09
NFX1-201ENST00000318524 PTF1AQ7RTS3 328 aa8.21□□□□□ -1.09
NFX1-201ENST00000318524 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.09
NFX1-201ENST00000318524 PHAXQ9H814 394 aaKnown RBP8.21□□□□□ -1.09
NFX1-201ENST00000318524 ERBB3P21860 1342 aa8.21□□□□□ -1.09
NFX1-201ENST00000318524 SBNO1A3KN83 1393 aa8.21□□□□□ -1.09
NFX1-201ENST00000318524 PIK3R4Q99570 1358 aa8.21□□□□□ -1.09
NFX1-201ENST00000318524 NSD2O96028 1365 aa8.21□□□□□ -1.1
NFX1-201ENST00000318524 CHD2O14647 1828 aaKnown RBP8.21□□□□□ -1.1
NFX1-201ENST00000318524 OVOS2A0A0J9YW53 1432 aa8.21□□□□□ -1.1
NFX1-201ENST00000318524 OVOS2Q6IE36 1432 aa8.21□□□□□ -1.1
NFX1-201ENST00000318524 TMEM57Q8N5G2 664 aa8.2□□□□□ -1.1
NFX1-201ENST00000318524 STRCQ7RTU9 1775 aa8.2□□□□□ -1.1
NFX1-201ENST00000318524 NPC1L1Q9UHC9 1359 aa8.2□□□□□ -1.1
NFX1-201ENST00000318524 CYP27B1O15528 508 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 TRIM27P14373 513 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 CABP4P57796 275 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 PROSER3Q2NL68 480 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 PLEKHO1Q53GL0 409 aaPredicted RBP8.19□□□□□ -1.1
NFX1-201ENST00000318524 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 KCNQ2O43526 872 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 CCDC24Q8N4L8 307 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 ITSN1Q15811 1721 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 BLMP54132 1417 aaPredicted RBP8.19□□□□□ -1.1
NFX1-201ENST00000318524 SMG6Q86US8 1419 aaKnown RBP8.19□□□□□ -1.1
NFX1-201ENST00000318524 GNAI1P63096 354 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 PNNQ9H307 717 aaKnown RBP8.19□□□□□ -1.1
NFX1-201ENST00000318524 PPP4R2Q9NY27 417 aa8.19□□□□□ -1.1
NFX1-201ENST00000318524 ATP5J2-PTCD1G3V325 749 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 GAS2L2Q8NHY3 880 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 CHPF2Q9P2E5 772 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 TTC5Q8N0Z6 440 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 CERKQ8TCT0 537 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 PCNTO95613 3336 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 ZNF521Q96K83 1311 aa8.18□□□□□ -1.1
NFX1-201ENST00000318524 XRN1Q8IZH2 1706 aaKnown RBP8.18□□□□□ -1.1
NFX1-201ENST00000318524 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
NFX1-201ENST00000318524 ASAP1Q9ULH1 1129 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.17□□□□□ -1.1
NFX1-201ENST00000318524 USP16Q9Y5T5 823 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 PIK3C2AO00443 1686 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 VAMP4O75379 141 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 ZCRB1Q8TBF4 217 aaKnown RBP8.17□□□□□ -1.1
NFX1-201ENST00000318524 STK31Q9BXU1 1019 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
NFX1-201ENST00000318524 IGHDP01880 384 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 A1BGP04217 495 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 ZKSCAN2Q63HK3 967 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 TSHZ3Q63HK5 1081 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
NFX1-201ENST00000318524 ZNF496Q96IT1 587 aaPredicted RBP8.16□□□□□ -1.1
NFX1-201ENST00000318524 CFAP44Q96MT7 982 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 INSRP06213 1382 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 TNS3Q68CZ2 1445 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 SSH2Q76I76 1423 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 BICDL1Q6ZP65 573 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 WDR63Q8IWG1 891 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 PCDHB15Q9Y5E8 787 aa8.16□□□□□ -1.1
NFX1-201ENST00000318524 IL2RBP14784 551 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 TAF7Q15545 349 aaPredicted RBP8.15□□□□□ -1.1
NFX1-201ENST00000318524 CWF19L2Q2TBE0 894 aaKnown RBP8.15□□□□□ -1.1
NFX1-201ENST00000318524 USP21Q9UK80 565 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 ANKARQ7Z5J8 1434 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 PEAK1Q9H792 1746 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 PXDNQ92626 1479 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 PNPLA6Q8IY17 1366 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 KIF20BQ96Q89 1820 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 GPTP24298 496 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 LMOD3Q0VAK6 560 aa8.15□□□□□ -1.1
NFX1-201ENST00000318524 SOS2Q07890 1332 aaPredicted RBP8.15□□□□□ -1.11
NFX1-201ENST00000318524 EXOC5O00471 708 aa8.15□□□□□ -1.11
NFX1-201ENST00000318524 RNMTO43148 476 aaKnown RBP8.15□□□□□ -1.11
NFX1-201ENST00000318524 LNPKQ9C0E8 428 aa8.15□□□□□ -1.11
NFX1-201ENST00000318524 MSH5O43196 834 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 PHF14O94880 888 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 RGPD2P0DJD1 1756 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 ZNF142P52746 1687 aaPredicted RBP8.14□□□□□ -1.11
NFX1-201ENST00000318524 COL3A1P02461 1466 aaPredicted RBP8.14□□□□□ -1.11
NFX1-201ENST00000318524 PI4KAP2A4QPH2 592 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 SMARCA5O60264 1052 aaPredicted RBP8.14□□□□□ -1.11
NFX1-201ENST00000318524 DDB1Q16531 1140 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 PI4KAP1Q8N8J0 262 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 MEIS3Q99687 375 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 SPG7Q9UQ90 795 aa8.14□□□□□ -1.11
NFX1-201ENST00000318524 AATKQ6ZMQ8 1374 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms