RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 NLRP6P59044 892 aa25.94■■□□□ 1.74
TTC39C-202ENST00000317571 USP54Q70EL1 1684 aa25.94■■□□□ 1.74
TTC39C-202ENST00000317571 AMPHP49418 695 aa25.94■■□□□ 1.74
TTC39C-202ENST00000317571 TBC1D2Q9BYX2 928 aa25.93■■□□□ 1.74
TTC39C-202ENST00000317571 ANKRD45Q5TZF3 282 aa25.93■■□□□ 1.74
TTC39C-202ENST00000317571 GCC1Q96CN9 775 aa25.92■■□□□ 1.74
TTC39C-202ENST00000317571 FRAT2O75474 233 aaPredicted RBP25.92■■□□□ 1.74
TTC39C-202ENST00000317571 TRHP20396 242 aaPredicted RBP25.92■■□□□ 1.74
TTC39C-202ENST00000317571 INTS3Q68E01 1043 aaKnown RBP25.92■■□□□ 1.74
TTC39C-202ENST00000317571 CHMP4BQ9H444 224 aaKnown RBP25.91■■□□□ 1.74
TTC39C-202ENST00000317571 CHD2O14647 1828 aaKnown RBP25.91■■□□□ 1.74
TTC39C-202ENST00000317571 RBM33Q96EV2 1170 aaKnown RBP25.9■■□□□ 1.74
TTC39C-202ENST00000317571 C22orf23Q9BZE7 217 aa25.9■■□□□ 1.74
TTC39C-202ENST00000317571 KIF24Q5T7B8 1368 aa25.9■■□□□ 1.74
TTC39C-202ENST00000317571 BECN1Q14457 450 aa25.9■■□□□ 1.74
TTC39C-202ENST00000317571 ATP10DQ9P241 1426 aa25.9■■□□□ 1.74
TTC39C-202ENST00000317571 HOXC9P31274 260 aa25.89■■□□□ 1.74
TTC39C-202ENST00000317571 LRRC37A3O60309 1634 aa25.89■■□□□ 1.73
TTC39C-202ENST00000317571 ANTXR1Q9H6X2 564 aa25.88■■□□□ 1.73
TTC39C-202ENST00000317571 SLKQ9H2G2 1235 aaPredicted RBP25.88■■□□□ 1.73
TTC39C-202ENST00000317571 MSH6P52701 1360 aa25.87■■□□□ 1.73
TTC39C-202ENST00000317571 BMP2KLQ5H9B9 411 aa25.86■■□□□ 1.73
TTC39C-202ENST00000317571 G2E3Q7L622 706 aa25.85■■□□□ 1.73
TTC39C-202ENST00000317571 ABTB2Q8N961 1025 aa25.85■■□□□ 1.73
TTC39C-202ENST00000317571 TSPYL4Q9UJ04 414 aa25.85■■□□□ 1.73
TTC39C-202ENST00000317571 ZNF142P52746 1687 aaPredicted RBP25.83■■□□□ 1.73
TTC39C-202ENST00000317571 RTF1Q92541 710 aaKnown RBP25.83■■□□□ 1.73
TTC39C-202ENST00000317571 SLC4A2P04920 1241 aa25.83■■□□□ 1.72
TTC39C-202ENST00000317571 GAS2L2Q8NHY3 880 aa25.82■■□□□ 1.72
TTC39C-202ENST00000317571 PTPRCP08575 1304 aa25.82■■□□□ 1.72
TTC39C-202ENST00000317571 LTN1O94822 1766 aa25.82■■□□□ 1.72
TTC39C-202ENST00000317571 MEIS3Q99687 375 aa25.82■■□□□ 1.72
TTC39C-202ENST00000317571 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
TTC39C-202ENST00000317571 HAP1P54257 671 aaPredicted RBP25.81■■□□□ 1.72
TTC39C-202ENST00000317571 DCTPP1Q9H773 170 aa25.81■■□□□ 1.72
TTC39C-202ENST00000317571 PHF8Q9UPP1 1060 aa25.81■■□□□ 1.72
TTC39C-202ENST00000317571 LTV1Q96GA3 475 aaPredicted RBP25.8■■□□□ 1.72
TTC39C-202ENST00000317571 ANKRD44Q8N8A2 993 aa25.8■■□□□ 1.72
TTC39C-202ENST00000317571 CEP85Q6P2H3 762 aa25.79■■□□□ 1.72
TTC39C-202ENST00000317571 ANKLE2Q86XL3 938 aa25.79■■□□□ 1.72
TTC39C-202ENST00000317571 F6X3S4 739 aa25.78■■□□□ 1.72
TTC39C-202ENST00000317571 USHBP1Q8N6Y0 703 aa25.78■■□□□ 1.72
TTC39C-202ENST00000317571 FAM208AQ9UK61 1670 aaKnown RBP25.78■■□□□ 1.72
TTC39C-202ENST00000317571 NFAT5O94916 1531 aa25.78■■□□□ 1.72
TTC39C-202ENST00000317571 GSPT1P15170 499 aaKnown RBP25.77■■□□□ 1.72
TTC39C-202ENST00000317571 RBM25P49756 843 aaKnown RBP25.77■■□□□ 1.72
TTC39C-202ENST00000317571 IL17REQ8NFR9 667 aa25.77■■□□□ 1.72
TTC39C-202ENST00000317571 C14orf37Q86TY3 774 aa25.76■■□□□ 1.71
TTC39C-202ENST00000317571 SPRYD3Q8NCJ5 442 aa25.76■■□□□ 1.71
TTC39C-202ENST00000317571 TBC1D9Q6ZT07 1266 aa25.76■■□□□ 1.71
TTC39C-202ENST00000317571 PLEKHM2Q8IWE5 1019 aa25.76■■□□□ 1.71
TTC39C-202ENST00000317571 C16orf71Q8IYS4 520 aaPredicted RBP25.76■■□□□ 1.71
TTC39C-202ENST00000317571 GNAT3A8MTJ3 354 aa25.75■■□□□ 1.71
TTC39C-202ENST00000317571 GSE1Q14687 1217 aa25.75■■□□□ 1.71
TTC39C-202ENST00000317571 HTATSF1O43719 755 aaKnown RBP25.74■■□□□ 1.71
TTC39C-202ENST00000317571 ADAMTSL3P82987 1691 aa25.74■■□□□ 1.71
TTC39C-202ENST00000317571 OTUD7AQ8TE49 926 aaPredicted RBP25.74■■□□□ 1.71
TTC39C-202ENST00000317571 ADGRL3Q9HAR2 1447 aa25.74■■□□□ 1.71
TTC39C-202ENST00000317571 MAP3K5Q99683 1374 aa25.74■■□□□ 1.71
TTC39C-202ENST00000317571 RPAP2Q8IXW5 612 aaPredicted RBP25.73■■□□□ 1.71
TTC39C-202ENST00000317571 IL27Q8NEV9 243 aa25.73■■□□□ 1.71
TTC39C-202ENST00000317571 KIF2CQ99661 725 aa25.73■■□□□ 1.71
TTC39C-202ENST00000317571 SETD1BQ9UPS6 1966 aaKnown RBP25.71■■□□□ 1.71
TTC39C-202ENST00000317571 RGPD2P0DJD1 1756 aa25.71■■□□□ 1.71
TTC39C-202ENST00000317571 SLC4A10Q6U841 1118 aa25.71■■□□□ 1.71
TTC39C-202ENST00000317571 SMARCA5O60264 1052 aaPredicted RBP25.69■■□□□ 1.7
TTC39C-202ENST00000317571 NECTIN2Q92692 538 aa25.69■■□□□ 1.7
TTC39C-202ENST00000317571 ESCO1Q5FWF5 840 aa25.69■■□□□ 1.7
TTC39C-202ENST00000317571 NBPF6Q5VWK0 638 aa25.68■■□□□ 1.7
TTC39C-202ENST00000317571 IP6K1Q92551 441 aa25.68■■□□□ 1.7
TTC39C-202ENST00000317571 NBPF4Q96M43 638 aa25.68■■□□□ 1.7
TTC39C-202ENST00000317571 TTC22Q5TAA0 569 aa25.67■■□□□ 1.7
TTC39C-202ENST00000317571 APBB1O00213 710 aa25.66■■□□□ 1.7
TTC39C-202ENST00000317571 FLIIQ13045 1269 aa25.66■■□□□ 1.7
TTC39C-202ENST00000317571 NCOA3Q9Y6Q9 1424 aa25.66■■□□□ 1.7
TTC39C-202ENST00000317571 CDC45O75419 566 aa25.65■■□□□ 1.7
TTC39C-202ENST00000317571 CCT4P50991 539 aaKnown RBP25.64■■□□□ 1.7
TTC39C-202ENST00000317571 TAF7Q15545 349 aaPredicted RBP25.64■■□□□ 1.7
TTC39C-202ENST00000317571 ORAI2Q96SN7 254 aa25.64■■□□□ 1.7
TTC39C-202ENST00000317571 MED1Q15648 1581 aaPredicted RBP25.64■■□□□ 1.7
TTC39C-202ENST00000317571 PHRF1Q9P1Y6 1649 aaKnown RBP25.64■■□□□ 1.69
TTC39C-202ENST00000317571 NPHP4O75161 1426 aaPredicted RBP25.64■■□□□ 1.69
TTC39C-202ENST00000317571 PSME1Q06323 249 aa25.64■■□□□ 1.69
TTC39C-202ENST00000317571 STK31Q9BXU1 1019 aa25.64■■□□□ 1.69
TTC39C-202ENST00000317571 CD2BP2O95400 341 aaKnown RBP25.63■■□□□ 1.69
TTC39C-202ENST00000317571 CEMIPQ8WUJ3 1361 aa25.63■■□□□ 1.69
TTC39C-202ENST00000317571 XPCQ01831 940 aaPredicted RBP25.63■■□□□ 1.69
TTC39C-202ENST00000317571 CCDC30Q5VVM6 783 aa25.62■■□□□ 1.69
TTC39C-202ENST00000317571 HSCBQ8IWL3 235 aa25.62■■□□□ 1.69
TTC39C-202ENST00000317571 SNX21Q969T3 373 aa25.62■■□□□ 1.69
TTC39C-202ENST00000317571 N4BP2Q86UW6 1770 aaPredicted RBP25.62■■□□□ 1.69
TTC39C-202ENST00000317571 LRRC59Q96AG4 307 aaKnown RBP25.62■■□□□ 1.69
TTC39C-202ENST00000317571 ZBTB7CA1YPR0 619 aa25.61■■□□□ 1.69
TTC39C-202ENST00000317571 FKBP5Q13451 457 aaPredicted RBP25.61■■□□□ 1.69
TTC39C-202ENST00000317571 RBM42Q9BTD8 480 aaKnown RBP25.61■■□□□ 1.69
TTC39C-202ENST00000317571 CACNA1FO60840 1977 aa25.61■■□□□ 1.69
TTC39C-202ENST00000317571 LGR6Q9HBX8 967 aa25.61■■□□□ 1.69
TTC39C-202ENST00000317571 DDIT3P35638 169 aa25.6■■□□□ 1.69
TTC39C-202ENST00000317571 BABAM1Q9NWV8 329 aa25.58■■□□□ 1.69
TTC39C-202ENST00000317571 KDM3BQ7LBC6 1761 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms