RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 NECTIN2Q92692 538 aa18.58■□□□□ 0.57
CLK4-201ENST00000316308 C22orf23Q9BZE7 217 aa18.58■□□□□ 0.57
CLK4-201ENST00000316308 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.56
CLK4-201ENST00000316308 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
CLK4-201ENST00000316308 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.56
CLK4-201ENST00000316308 FLT4P35916 1363 aa18.58■□□□□ 0.56
CLK4-201ENST00000316308 UPF2Q9HAU5 1272 aaKnown RBP18.57■□□□□ 0.56
CLK4-201ENST00000316308 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
CLK4-201ENST00000316308 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
CLK4-201ENST00000316308 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
CLK4-201ENST00000316308 SETD1BQ9UPS6 1966 aaKnown RBP18.57■□□□□ 0.56
CLK4-201ENST00000316308 XRN1Q8IZH2 1706 aaKnown RBP18.56■□□□□ 0.56
CLK4-201ENST00000316308 APBB1O00213 710 aa18.56■□□□□ 0.56
CLK4-201ENST00000316308 HOXC9P31274 260 aa18.56■□□□□ 0.56
CLK4-201ENST00000316308 OTUD7AQ8TE49 926 aaPredicted RBP18.56■□□□□ 0.56
CLK4-201ENST00000316308 MEIS3Q99687 375 aa18.56■□□□□ 0.56
CLK4-201ENST00000316308 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
CLK4-201ENST00000316308 TSPYL4Q9UJ04 414 aa18.55■□□□□ 0.56
CLK4-201ENST00000316308 MSH6P52701 1360 aa18.55■□□□□ 0.56
CLK4-201ENST00000316308 IGSF1Q8N6C5 1336 aa18.55■□□□□ 0.56
CLK4-201ENST00000316308 FMN2Q9NZ56 1722 aa18.55■□□□□ 0.56
CLK4-201ENST00000316308 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
CLK4-201ENST00000316308 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
CLK4-201ENST00000316308 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
CLK4-201ENST00000316308 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
CLK4-201ENST00000316308 KDRP35968 1356 aa18.54■□□□□ 0.56
CLK4-201ENST00000316308 MARF1Q9Y4F3 1742 aaKnown RBP18.53■□□□□ 0.56
CLK4-201ENST00000316308 SMARCA5O60264 1052 aaPredicted RBP18.52■□□□□ 0.56
CLK4-201ENST00000316308 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
CLK4-201ENST00000316308 SLC4A10Q6U841 1118 aa18.52■□□□□ 0.56
CLK4-201ENST00000316308 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
CLK4-201ENST00000316308 BECN1Q14457 450 aa18.51■□□□□ 0.55
CLK4-201ENST00000316308 GCC1Q96CN9 775 aa18.51■□□□□ 0.55
CLK4-201ENST00000316308 GSPT1P15170 499 aaKnown RBP18.51■□□□□ 0.55
CLK4-201ENST00000316308 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
CLK4-201ENST00000316308 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
CLK4-201ENST00000316308 NWD1Q149M9 1564 aa18.49■□□□□ 0.55
CLK4-201ENST00000316308 KIAA0232Q92628 1395 aa18.49■□□□□ 0.55
CLK4-201ENST00000316308 CEP85Q6P2H3 762 aa18.49■□□□□ 0.55
CLK4-201ENST00000316308 TBC1D9Q6ZT07 1266 aa18.49■□□□□ 0.55
CLK4-201ENST00000316308 PHF8Q9UPP1 1060 aa18.49■□□□□ 0.55
CLK4-201ENST00000316308 BMP2KLQ5H9B9 411 aa18.48■□□□□ 0.55
CLK4-201ENST00000316308 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
CLK4-201ENST00000316308 PLEKHM2Q8IWE5 1019 aa18.48■□□□□ 0.55
CLK4-201ENST00000316308 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
CLK4-201ENST00000316308 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
CLK4-201ENST00000316308 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
CLK4-201ENST00000316308 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
CLK4-201ENST00000316308 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
CLK4-201ENST00000316308 GSE1Q14687 1217 aa18.46■□□□□ 0.55
CLK4-201ENST00000316308 LRRC59Q96AG4 307 aaKnown RBP18.46■□□□□ 0.55
CLK4-201ENST00000316308 KIF2CQ99661 725 aa18.46■□□□□ 0.55
CLK4-201ENST00000316308 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
CLK4-201ENST00000316308 ANKLE2Q86XL3 938 aa18.46■□□□□ 0.55
CLK4-201ENST00000316308 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
CLK4-201ENST00000316308 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
CLK4-201ENST00000316308 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
CLK4-201ENST00000316308 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
CLK4-201ENST00000316308 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
CLK4-201ENST00000316308 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
CLK4-201ENST00000316308 IL27Q8NEV9 243 aa18.43■□□□□ 0.54
CLK4-201ENST00000316308 PTPRCP08575 1304 aa18.42■□□□□ 0.54
CLK4-201ENST00000316308 TSHZ3Q63HK5 1081 aa18.42■□□□□ 0.54
CLK4-201ENST00000316308 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
CLK4-201ENST00000316308 KCNQ3O43525 872 aa18.42■□□□□ 0.54
CLK4-201ENST00000316308 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
CLK4-201ENST00000316308 PSME1Q06323 249 aa18.41■□□□□ 0.54
CLK4-201ENST00000316308 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
CLK4-201ENST00000316308 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
CLK4-201ENST00000316308 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
CLK4-201ENST00000316308 FLIIQ13045 1269 aa18.4■□□□□ 0.54
CLK4-201ENST00000316308 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
CLK4-201ENST00000316308 FKBP5Q13451 457 aaPredicted RBP18.4■□□□□ 0.54
CLK4-201ENST00000316308 EXOC6BQ9Y2D4 811 aa18.39■□□□□ 0.54
CLK4-201ENST00000316308 LTN1O94822 1766 aa18.39■□□□□ 0.53
CLK4-201ENST00000316308 ANXA1P04083 346 aa18.39■□□□□ 0.53
CLK4-201ENST00000316308 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
CLK4-201ENST00000316308 MAP3K5Q99683 1374 aa18.39■□□□□ 0.53
CLK4-201ENST00000316308 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
CLK4-201ENST00000316308 RPAP2Q8IXW5 612 aaPredicted RBP18.38■□□□□ 0.53
CLK4-201ENST00000316308 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
CLK4-201ENST00000316308 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
CLK4-201ENST00000316308 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
CLK4-201ENST00000316308 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
CLK4-201ENST00000316308 IP6K1Q92551 441 aa18.37■□□□□ 0.53
CLK4-201ENST00000316308 TAF7Q15545 349 aaPredicted RBP18.37■□□□□ 0.53
CLK4-201ENST00000316308 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
CLK4-201ENST00000316308 SDSP20132 328 aa18.36■□□□□ 0.53
CLK4-201ENST00000316308 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
CLK4-201ENST00000316308 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
CLK4-201ENST00000316308 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
CLK4-201ENST00000316308 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
CLK4-201ENST00000316308 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
CLK4-201ENST00000316308 CDC45O75419 566 aa18.35■□□□□ 0.53
CLK4-201ENST00000316308 NFAT5O94916 1531 aa18.35■□□□□ 0.53
CLK4-201ENST00000316308 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
CLK4-201ENST00000316308 RTN4Q9NQC3 1192 aaKnown RBP18.35■□□□□ 0.53
CLK4-201ENST00000316308 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
CLK4-201ENST00000316308 ADGRL3Q9HAR2 1447 aa18.33■□□□□ 0.53
CLK4-201ENST00000316308 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms