RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ARID4AP29374 1257 aaPredicted RBP6.8□□□□□ -1.32
SMCO3-201ENST00000316048 PURBQ96QR8 312 aaKnown RBP6.8□□□□□ -1.32
SMCO3-201ENST00000316048 SOWAHDA6NJG2 315 aa6.8□□□□□ -1.32
SMCO3-201ENST00000316048 SEC13P55735 322 aa6.8□□□□□ -1.32
SMCO3-201ENST00000316048 TRIM32Q13049 653 aa6.8□□□□□ -1.32
SMCO3-201ENST00000316048 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
SMCO3-201ENST00000316048 TRMT44Q8IYL2 757 aaKnown RBP6.8□□□□□ -1.32
SMCO3-201ENST00000316048 TSEN2Q8NCE0 465 aaKnown RBP6.8□□□□□ -1.32
SMCO3-201ENST00000316048 ZNF211Q13398 564 aaPredicted RBP6.79□□□□□ -1.32
SMCO3-201ENST00000316048 CDAN1Q8IWY9 1227 aa6.79□□□□□ -1.32
SMCO3-201ENST00000316048 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
SMCO3-201ENST00000316048 MKNK1Q9BUB5 465 aa6.79□□□□□ -1.32
SMCO3-201ENST00000316048 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
SMCO3-201ENST00000316048 INTS6LQ5JSJ4 861 aaKnown RBP6.79□□□□□ -1.32
SMCO3-201ENST00000316048 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
SMCO3-201ENST00000316048 RNF20Q5VTR2 975 aa6.78□□□□□ -1.32
SMCO3-201ENST00000316048 ERVH48-1M5A8F1 160 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 DNAJC14Q6Y2X3 702 aaPredicted RBP6.77□□□□□ -1.33
SMCO3-201ENST00000316048 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMCO3-201ENST00000316048 ABL1P00519 1130 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 USP4Q13107 963 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 MTMR3Q13615 1198 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 HINFPQ9BQA5 517 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 TMPRSS4Q9NRS4 437 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 SEPT3Q9UH03 358 aa6.77□□□□□ -1.33
SMCO3-201ENST00000316048 UNCXA6NJT0 531 aa6.76□□□□□ -1.33
SMCO3-201ENST00000316048 VASH1Q7L8A9 365 aaPredicted RBP6.76□□□□□ -1.33
SMCO3-201ENST00000316048 TLL2Q9Y6L7 1015 aa6.76□□□□□ -1.33
SMCO3-201ENST00000316048 ZBTB24O43167 697 aaPredicted RBP6.76□□□□□ -1.33
SMCO3-201ENST00000316048 FKBP5Q13451 457 aaPredicted RBP6.76□□□□□ -1.33
SMCO3-201ENST00000316048 ARID5BQ14865 1188 aa6.76□□□□□ -1.33
SMCO3-201ENST00000316048 TAS1R3Q7RTX0 852 aa6.76□□□□□ -1.33
SMCO3-201ENST00000316048 SEPT12Q8IYM1 358 aa6.76□□□□□ -1.33
SMCO3-201ENST00000316048 TMEM229AB2RXF0 380 aa6.75□□□□□ -1.33
SMCO3-201ENST00000316048 FSHRP23945 695 aa6.75□□□□□ -1.33
SMCO3-201ENST00000316048 POTEGQ6S5H5 508 aa6.75□□□□□ -1.33
SMCO3-201ENST00000316048 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
SMCO3-201ENST00000316048 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
SMCO3-201ENST00000316048 ZNF358Q9NW07 568 aa6.75□□□□□ -1.33
SMCO3-201ENST00000316048 BIN2Q9UBW5 565 aaPredicted RBP6.75□□□□□ -1.33
SMCO3-201ENST00000316048 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
SMCO3-201ENST00000316048 H3BRB1 525 aa6.74□□□□□ -1.33
SMCO3-201ENST00000316048 TUT1Q9H6E5 874 aaKnown RBP6.74□□□□□ -1.33
SMCO3-201ENST00000316048 KCNC4Q03721 635 aa6.74□□□□□ -1.33
SMCO3-201ENST00000316048 ANKLE1Q8NAG6 615 aa6.74□□□□□ -1.33
SMCO3-201ENST00000316048 EMID1Q96A84 441 aaPredicted RBP6.74□□□□□ -1.33
SMCO3-201ENST00000316048 ITGBL1O95965 494 aaPredicted RBP6.73□□□□□ -1.33
SMCO3-201ENST00000316048 VARSP26640 1264 aaKnown RBP6.73□□□□□ -1.33
SMCO3-201ENST00000316048 WEE1P30291 646 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 SCNN1DP51172 638 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 PPP1R18Q6NYC8 613 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 EHBP1Q8NDI1 1231 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 OSBPL3Q9H4L5 887 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 CDV3Q9UKY7 258 aaKnown RBP6.73□□□□□ -1.33
SMCO3-201ENST00000316048 DNMT3AQ9Y6K1 912 aaPredicted RBP6.73□□□□□ -1.33
SMCO3-201ENST00000316048 MYCP01106 439 aaPredicted RBP6.73□□□□□ -1.33
SMCO3-201ENST00000316048 ERVK-9P63128 1117 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 ZNF784Q8NCA9 323 aaPredicted RBP6.73□□□□□ -1.33
SMCO3-201ENST00000316048 SIRT1Q96EB6 747 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 AMOTL2Q9Y2J4 779 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 MAP4K5Q9Y4K4 846 aa6.73□□□□□ -1.33
SMCO3-201ENST00000316048 GRM5P41594 1212 aa6.72□□□□□ -1.33
SMCO3-201ENST00000316048 WNT7BP56706 349 aa6.72□□□□□ -1.33
SMCO3-201ENST00000316048 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
SMCO3-201ENST00000316048 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
SMCO3-201ENST00000316048 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.33
SMCO3-201ENST00000316048 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.33
SMCO3-201ENST00000316048 ECM1Q16610 540 aa6.71□□□□□ -1.33
SMCO3-201ENST00000316048 E9PSI1 815 aa6.71□□□□□ -1.34
SMCO3-201ENST00000316048 RC3H1Q5TC82 1133 aaKnown RBP6.71□□□□□ -1.34
SMCO3-201ENST00000316048 CC2D2BQ6DHV5 1058 aa6.71□□□□□ -1.34
SMCO3-201ENST00000316048 ETNK1Q9HBU6 452 aa6.71□□□□□ -1.34
SMCO3-201ENST00000316048 SERTAD1Q9UHV2 236 aa6.71□□□□□ -1.34
SMCO3-201ENST00000316048 ICMTO60725 284 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 GDF10P55107 478 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 LIAT1Q6ZQX7 453 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 C21orf2O43822 256 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 NR3C2P08235 984 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 TBCELQ5QJ74 424 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 GLYCTKQ8IVS8 523 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 TSPAN10Q9H1Z9 355 aaPredicted RBP6.7□□□□□ -1.34
SMCO3-201ENST00000316048 RAB6BQ9NRW1 208 aa6.7□□□□□ -1.34
SMCO3-201ENST00000316048 LILRA1O75019 489 aa6.69□□□□□ -1.34
SMCO3-201ENST00000316048 EPHA4P54764 986 aa6.69□□□□□ -1.34
SMCO3-201ENST00000316048 SCG3Q8WXD2 468 aaKnown RBP6.69□□□□□ -1.34
SMCO3-201ENST00000316048 CDK15Q96Q40 435 aa6.69□□□□□ -1.34
SMCO3-201ENST00000316048 M0R2N6 131 aa6.68□□□□□ -1.34
SMCO3-201ENST00000316048 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
SMCO3-201ENST00000316048 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
SMCO3-201ENST00000316048 RBM47A0AV96 593 aaKnown RBP6.68□□□□□ -1.34
SMCO3-201ENST00000316048 ANKRD33BA6NCL7 494 aa6.68□□□□□ -1.34
SMCO3-201ENST00000316048 ARHGAP4P98171 946 aa6.68□□□□□ -1.34
SMCO3-201ENST00000316048 TAGLNQ01995 201 aaKnown RBP6.68□□□□□ -1.34
SMCO3-201ENST00000316048 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
SMCO3-201ENST00000316048 CHMP7Q8WUX9 453 aaPredicted RBP6.68□□□□□ -1.34
SMCO3-201ENST00000316048 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.68□□□□□ -1.34
SMCO3-201ENST00000316048 SIAH2O43255 324 aa6.67□□□□□ -1.34
SMCO3-201ENST00000316048 ADD1P35611 737 aaKnown RBP6.67□□□□□ -1.34
SMCO3-201ENST00000316048 RNF166Q96A37 237 aaPredicted RBP6.67□□□□□ -1.34
SMCO3-201ENST00000316048 SAP130Q9H0E3 1048 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms