RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 PDE3AQ14432 1141 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 IL16Q14005 1332 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 ARHGEF10O15013 1369 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 MSH6P52701 1360 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 LTN1O94822 1766 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 CRB1P82279 1406 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 MRPL50Q8N5N7 158 aaKnown RBP8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 TSPYL4Q9UJ04 414 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 F6X3S4 739 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 CHL1O00533 1208 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 EP400Q96L91 3159 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 PRAMEF22A3QJZ6 481 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 ANXA1P04083 346 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 MED1Q15648 1581 aaPredicted RBP8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 RTF1Q92541 710 aaKnown RBP8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
LYSMD3-201ENST00000315948 PXDNQ92626 1479 aa8.96□□□□□ -0.97
LYSMD3-201ENST00000315948 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.97
LYSMD3-201ENST00000315948 USP35Q9P2H5 1018 aa8.96□□□□□ -0.98
LYSMD3-201ENST00000315948 KIAA0232Q92628 1395 aa8.95□□□□□ -0.98
LYSMD3-201ENST00000315948 XIRP1Q702N8 1843 aaKnown RBP8.95□□□□□ -0.98
LYSMD3-201ENST00000315948 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
LYSMD3-201ENST00000315948 KCNH5Q8NCM2 988 aa8.95□□□□□ -0.98
LYSMD3-201ENST00000315948 USP19O94966 1318 aa8.95□□□□□ -0.98
LYSMD3-201ENST00000315948 ZNF530Q6P9A1 599 aaPredicted RBP8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 RGPD5Q99666 1765 aa8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 ERBB3P21860 1342 aa8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 TRPM3Q9HCF6 1732 aaPredicted RBP8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 CSB-PGBD3P0DP91 1061 aa8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 PDE4AP27815 886 aa8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 CENPQQ7L2Z9 268 aaPredicted RBP8.94□□□□□ -0.98
LYSMD3-201ENST00000315948 EIF2S2P20042 333 aaKnown RBP8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 NCBP3Q53F19 620 aaKnown RBP8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 PIP4K2AP48426 406 aaPredicted RBP8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 SLC39A6Q13433 755 aa8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 SLC4A10Q6U841 1118 aa8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 SPATA31A3Q5VYP0 1347 aa8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 NPHP3Q7Z494 1330 aa8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
LYSMD3-201ENST00000315948 STRN4Q9NRL3 753 aa8.92□□□□□ -0.98
LYSMD3-201ENST00000315948 MAP3K5Q99683 1374 aa8.92□□□□□ -0.98
LYSMD3-201ENST00000315948 ZBTB40Q9NUA8 1239 aa8.92□□□□□ -0.98
LYSMD3-201ENST00000315948 SIRT2Q8IXJ6 389 aa8.92□□□□□ -0.98
LYSMD3-201ENST00000315948 PHAXQ9H814 394 aaKnown RBP8.92□□□□□ -0.98
LYSMD3-201ENST00000315948 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 SEC24BO95487 1268 aa8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 ALDH1L2Q3SY69 923 aa8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 APBB1O00213 710 aa8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 ZBTB7BO15156 539 aaPredicted RBP8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 KIF16BQ96L93 1317 aa8.91□□□□□ -0.98
LYSMD3-201ENST00000315948 CT47B1P0C2W7 299 aaPredicted RBP8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 PRDM11Q9NQV5 511 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 RGS12O14924 1447 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 TNS3Q68CZ2 1445 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 SLIT3O75094 1523 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 PROSER3Q2NL68 480 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 MEIS3Q99687 375 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 MEGF6O75095 1541 aa8.9□□□□□ -0.98
LYSMD3-201ENST00000315948 RTL1A6NKG5 1358 aa8.9□□□□□ -0.99
LYSMD3-201ENST00000315948 BACH2Q9BYV9 841 aa8.9□□□□□ -0.99
LYSMD3-201ENST00000315948 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 ALS2Q96Q42 1657 aa8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 C8orf34Q49A92 452 aa8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 CYP27B1O15528 508 aa8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 PIP4K2BP78356 416 aa8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 LARP1Q6PKG0 1096 aaKnown RBP8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 DDX19BQ9UMR2 479 aa8.89□□□□□ -0.99
LYSMD3-201ENST00000315948 NFATC2IPQ8NCF5 419 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 ABCC4O15439 1325 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 BTBD11A6QL63 1104 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 IPO8O15397 1037 aaKnown RBP8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 CHPF2Q9P2E5 772 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 RNMTO43148 476 aaKnown RBP8.88□□□□□ -0.99
LYSMD3-201ENST00000315948 KIF24Q5T7B8 1368 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 SOS2Q07890 1332 aaPredicted RBP8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 TEFQ10587 303 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 USP54Q70EL1 1684 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 DCCP43146 1447 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 EIF4A1P60842 406 aaKnown RBP8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 C1orf141Q5JVX7 400 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 RAPGEF4Q8WZA2 1011 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 CEMIPQ8WUJ3 1361 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 PLEKHO1Q53GL0 409 aaPredicted RBP8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 UTRNP46939 3433 aa8.87□□□□□ -0.99
LYSMD3-201ENST00000315948 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
LYSMD3-201ENST00000315948 CAMTA1Q9Y6Y1 1673 aa8.86□□□□□ -0.99
LYSMD3-201ENST00000315948 FLIIQ13045 1269 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms