RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 PARD3Q8TEW0 1356 aa14.46□□□□□ -0.09
LDLRAD3-201ENST00000315571 KRT28Q7Z3Y7 464 aa14.46□□□□□ -0.09
LDLRAD3-201ENST00000315571 COG3Q96JB2 828 aa14.46□□□□□ -0.09
LDLRAD3-201ENST00000315571 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.09
LDLRAD3-201ENST00000315571 TOM1O60784 492 aa14.45□□□□□ -0.1
LDLRAD3-201ENST00000315571 MFAP1P55081 439 aaKnown RBP14.45□□□□□ -0.1
LDLRAD3-201ENST00000315571 ISY1Q9ULR0 285 aaKnown RBP14.45□□□□□ -0.1
LDLRAD3-201ENST00000315571 ABTB2Q8N961 1025 aa14.45□□□□□ -0.1
LDLRAD3-201ENST00000315571 DDX17Q92841 729 aaKnown RBP14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 BRD4O60885 1362 aaPredicted RBP14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 C20orf194Q5TEA3 1177 aa14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 KIF1AQ12756 1690 aa14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 UBAP1LF5GYI3 381 aa14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 MPNDQ8N594 471 aa14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 SECISBP2LQ93073 1101 aaKnown RBP14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
LDLRAD3-201ENST00000315571 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 NLRP6P59044 892 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 MON2Q7Z3U7 1717 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 NUTM2GQ5VZR2 741 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 NLRP13Q86W25 1043 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 TBC1D2Q9BYX2 928 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 PIP4K2BP78356 416 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 SASS6Q6UVJ0 657 aa14.43□□□□□ -0.1
LDLRAD3-201ENST00000315571 TSC1Q92574 1164 aa14.42□□□□□ -0.1
LDLRAD3-201ENST00000315571 FAM177BA6PVY3 158 aa14.42□□□□□ -0.1
LDLRAD3-201ENST00000315571 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
LDLRAD3-201ENST00000315571 KIAA2012Q0VF49 1180 aa14.42□□□□□ -0.1
LDLRAD3-201ENST00000315571 CHAF1AQ13111 956 aaPredicted RBP14.42□□□□□ -0.1
LDLRAD3-201ENST00000315571 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
LDLRAD3-201ENST00000315571 SOX12O15370 315 aa14.41□□□□□ -0.1
LDLRAD3-201ENST00000315571 SKOR2Q2VWA4 1001 aaPredicted RBP14.41□□□□□ -0.1
LDLRAD3-201ENST00000315571 ZSCAN20P17040 1043 aaPredicted RBP14.41□□□□□ -0.1
LDLRAD3-201ENST00000315571 PNISRQ8TF01 805 aaKnown RBP14.4□□□□□ -0.1
LDLRAD3-201ENST00000315571 PDE3BQ13370 1112 aa14.4□□□□□ -0.1
LDLRAD3-201ENST00000315571 TPRNQ4KMQ1 711 aa14.4□□□□□ -0.1
LDLRAD3-201ENST00000315571 PATL2C9JE40 543 aaKnown RBP14.39□□□□□ -0.11
LDLRAD3-201ENST00000315571 CCDC66A2RUB6 948 aa14.39□□□□□ -0.11
LDLRAD3-201ENST00000315571 ERICH4A6NGS2 130 aa14.39□□□□□ -0.11
LDLRAD3-201ENST00000315571 ZBTB9Q96C00 473 aa14.38□□□□□ -0.11
LDLRAD3-201ENST00000315571 NRKQ7Z2Y5 1582 aa14.38□□□□□ -0.11
LDLRAD3-201ENST00000315571 SEC24BO95487 1268 aa14.38□□□□□ -0.11
LDLRAD3-201ENST00000315571 WDR43Q15061 677 aaKnown RBP eCLIP14.38□□□□□ -0.11
LDLRAD3-201ENST00000315571 KIF20BQ96Q89 1820 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 PDCL2Q8N4E4 241 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 TERF1P54274 439 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 IQSEC2Q5JU85 1478 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 SBNO1A3KN83 1393 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 USP31Q70CQ4 1352 aa14.37□□□□□ -0.11
LDLRAD3-201ENST00000315571 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 TRIM6-TRIM34B2RNG4 842 aa14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 MTHFSP49914 203 aa14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 TRIM34Q9BYJ4 488 aa14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 OVOS2A0A0J9YW53 1432 aa14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 OVOS2Q6IE36 1432 aa14.36□□□□□ -0.11
LDLRAD3-201ENST00000315571 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
LDLRAD3-201ENST00000315571 TNS3Q68CZ2 1445 aa14.35□□□□□ -0.11
LDLRAD3-201ENST00000315571 FBLN1P23142 703 aa14.35□□□□□ -0.11
LDLRAD3-201ENST00000315571 SPATA31A3Q5VYP0 1347 aa14.35□□□□□ -0.11
LDLRAD3-201ENST00000315571 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
LDLRAD3-201ENST00000315571 PXDNQ92626 1479 aa14.35□□□□□ -0.11
LDLRAD3-201ENST00000315571 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
LDLRAD3-201ENST00000315571 PTMSP20962 102 aa14.34□□□□□ -0.11
LDLRAD3-201ENST00000315571 RRS1Q15050 365 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-201ENST00000315571 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.11
LDLRAD3-201ENST00000315571 KIF3AQ9Y496 699 aa14.33□□□□□ -0.11
LDLRAD3-201ENST00000315571 PIK3C2AO00443 1686 aa14.33□□□□□ -0.12
LDLRAD3-201ENST00000315571 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.12
LDLRAD3-201ENST00000315571 CAVIN1Q6NZI2 390 aaKnown RBP14.33□□□□□ -0.12
LDLRAD3-201ENST00000315571 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
LDLRAD3-201ENST00000315571 EMILIN1Q9Y6C2 1016 aa14.32□□□□□ -0.12
LDLRAD3-201ENST00000315571 AATKQ6ZMQ8 1374 aa14.32□□□□□ -0.12
LDLRAD3-201ENST00000315571 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
LDLRAD3-201ENST00000315571 LRRC59Q96AG4 307 aaKnown RBP14.32□□□□□ -0.12
LDLRAD3-201ENST00000315571 POLKQ9UBT6 870 aa14.32□□□□□ -0.12
LDLRAD3-201ENST00000315571 HMGN5P82970 282 aaKnown RBP14.31□□□□□ -0.12
LDLRAD3-201ENST00000315571 AMPHP49418 695 aa14.31□□□□□ -0.12
LDLRAD3-201ENST00000315571 WWC1Q8IX03 1113 aa14.31□□□□□ -0.12
LDLRAD3-201ENST00000315571 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
LDLRAD3-201ENST00000315571 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
LDLRAD3-201ENST00000315571 CCDC39Q9UFE4 941 aa14.31□□□□□ -0.12
LDLRAD3-201ENST00000315571 GCP02774 474 aa14.3□□□□□ -0.12
LDLRAD3-201ENST00000315571 TIGD1Q96MW7 591 aa14.3□□□□□ -0.12
LDLRAD3-201ENST00000315571 TRPM3Q9HCF6 1732 aaPredicted RBP14.3□□□□□ -0.12
LDLRAD3-201ENST00000315571 C22orf23Q9BZE7 217 aa14.3□□□□□ -0.12
LDLRAD3-201ENST00000315571 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
LDLRAD3-201ENST00000315571 USP19O94966 1318 aa14.29□□□□□ -0.12
LDLRAD3-201ENST00000315571 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
LDLRAD3-201ENST00000315571 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
LDLRAD3-201ENST00000315571 HDAC5Q9UQL6 1122 aa14.29□□□□□ -0.12
LDLRAD3-201ENST00000315571 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
LDLRAD3-201ENST00000315571 TNPO1Q92973 898 aaKnown RBP14.28□□□□□ -0.12
LDLRAD3-201ENST00000315571 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.12
LDLRAD3-201ENST00000315571 ZC3H6P61129 1189 aaKnown RBP14.27□□□□□ -0.12
LDLRAD3-201ENST00000315571 ZKSCAN5Q9Y2L8 839 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms